mm9_v1_chr1_-_45559866_45559893	28.3628	FOX{D1,D2}.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr1_-_45559904_45559916	28.1813	FOX{D1,D2}.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_+_96361879_96362304	27.0091	FOX{D1,D2}.p2	AK089304|Txnip|56338|thioredoxin interacting protein	AK089403|Txnip|56338|thioredoxin interacting protein	NM_001009935|Txnip|56338|thioredoxin interacting protein	NM_023719|Txnip|56338|thioredoxin interacting protein	AK004653|Txnip|56338|thioredoxin interacting protein	AK082476|Txnip|56338|thioredoxin interacting protein	AK088870|Txnip|56338|thioredoxin interacting protein	AK089351|Txnip|56338|thioredoxin interacting protein	AK155517|Txnip|56338|thioredoxin interacting protein	AK171205|Txnip|56338|thioredoxin interacting protein	AK171312|Txnip|56338|thioredoxin interacting protein	AK171425|Txnip|56338|thioredoxin interacting protein	AK171456|Txnip|56338|thioredoxin interacting protein	AK171464|Txnip|56338|thioredoxin interacting protein	AK171527|Txnip|56338|thioredoxin interacting protein	BC031850|Txnip|56338|thioredoxin interacting protein	BC011212|Txnip|56338|thioredoxin interacting protein	AK187108|Txnip|56338|thioredoxin interacting protein	AF173681|Txnip|56338|thioredoxin interacting protein	AF282826|Txnip|56338|thioredoxin interacting protein	AK192038|Txnip|56338|thioredoxin interacting protein	AK214578|Txnip|56338|thioredoxin interacting protein
mm9_v1_chr10_+_97028456_97028463	25.912	FOX{D1,D2}.p2	BC005550|Lum|17022|lumican	S79461|Lum|17022|lumican
mm9_v1_chr16_+_48872720_48872733	25.0448	FOX{D1,D2}.p2	NM_181596|Retnlg|245195|resistin like gamma
mm9_v1_chr16_+_48872756_48872760	23.6836	FOX{D1,D2}.p2	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr1_+_51346108_51346149	22.264	FOX{D1,D2}.p2	S67386|Sdpr|20324|serum deprivation response	BC020008|Sdpr|20324|serum deprivation response
mm9_v1_chr1_+_51346086_51346100	20.4096	FOX{D1,D2}.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr1_-_195068455_195068557	20.4005	FOX{D1,D2}.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr1_+_51345952_51345993	20.2803	FOX{D1,D2}.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr7_-_118089700_118089700	19.3878	FOX{D1,D2}.p2	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr10_+_96079634_96079769	19.2196	FOX{D1,D2}.p2	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr1_-_45559700_45559773	18.5196	FOX{D1,D2}.p2	AK139130|Col5a2|12832|collagen, type V, alpha 2	AK160008|Col5a2|12832|collagen, type V, alpha 2	L02918|Col5a2|12832|collagen, type V, alpha 2	AK084803|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr1_-_45560001_45560126	18.4737	FOX{D1,D2}.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr10_+_115254308_115254566	18.148	FOX{D1,D2}.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr6_-_5446277_5446311	18.0549	FOX{D1,D2}.p2	AJ001418|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	NM_013743|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	BC026134|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK004543|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK036818|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4
mm9_v1_chr17_+_47641999_47642189	17.5691	FOX{D1,D2}.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr10_-_117252126_117252166	17.3741	FOX{D1,D2}.p2	
mm9_v1_chr8_-_25549415_25549421	17.0536	FOX{D1,D2}.p2	AK007441|1810011O10Rik|69068|RIKEN cDNA 1810011O10 gene	NM_026931|1810011O10Rik|69068|RIKEN cDNA 1810011O10 gene
mm9_v1_chr8_-_25549374_25549404	16.4289	FOX{D1,D2}.p2	BC016562|1810011O10Rik|69068|RIKEN cDNA 1810011O10 gene
mm9_v1_chr10_-_116786025_116786098	15.9265	FOX{D1,D2}.p2	AK018657|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr19_+_9092973_9093058	15.5775	FOX{D1,D2}.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr6_-_83486194_83486260	15.4123	FOX{D1,D2}.p2	AK146631|Actg2|11468|actin, gamma 2, smooth muscle, enteric	AK168649|Actg2|11468|actin, gamma 2, smooth muscle, enteric	BC002042|Actg2|11468|actin, gamma 2, smooth muscle, enteric	NM_009610|Actg2|11468|actin, gamma 2, smooth muscle, enteric
mm9_v1_chr10_-_60915251_60915468	15.3226	FOX{D1,D2}.p2	AK133912|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	BC119539|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	NM_010124|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	U75530|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr1_+_45390415_45390462	15.122	FOX{D1,D2}.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr9_+_7792286_7792314	14.9872	FOX{D1,D2}.p2	AK150630|Tmem123|71929|transmembrane protein 123
mm9_v1_chr6_+_135313010_135313048	14.9342	FOX{D1,D2}.p2	AK158369|Emp1|13730|epithelial membrane protein 1	AK159752|Emp1|13730|epithelial membrane protein 1	AK171061|Emp1|13730|epithelial membrane protein 1	AK172607|Emp1|13730|epithelial membrane protein 1	AK157366|Emp1|13730|epithelial membrane protein 1	AK171675|Emp1|13730|epithelial membrane protein 1	AK172705|Emp1|13730|epithelial membrane protein 1	BC034257|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr17_-_71201055_71201077	14.869	FOX{D1,D2}.p2	BC012700|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164075|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr4_+_144483110_144483188	14.8264	FOX{D1,D2}.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr4_+_94405963_94405990	14.7649	FOX{D1,D2}.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr2_-_28771940_28771959	14.6819	FOX{D1,D2}.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr6_+_135312948_135312972	14.5131	FOX{D1,D2}.p2	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr6_+_108804370_108804373	14.3811	FOX{D1,D2}.p2	AK193028|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr4_+_144482979_144483095	14.2704	FOX{D1,D2}.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr4_+_94406190_94406316	14.1902	FOX{D1,D2}.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr2_+_74536666_74536675	14.155	FOX{D1,D2}.p2	AK144746|Hoxd9|15438|homeobox D9
mm9_v1_chr5_-_17394564_17394590	14.1105	FOX{D1,D2}.p2	AK128908|Cd36|12491|CD36 antigen
mm9_v1_chr3_+_52072302_52072340	14.0064	FOX{D1,D2}.p2	AK137629|Foxo1|56458|forkhead box O1	AF114258|Foxo1|56458|forkhead box O1
mm9_v1_chr1_+_45402907_45402949	13.8231	FOX{D1,D2}.p2	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr4_+_144482722_144482729	13.6785	FOX{D1,D2}.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr3_-_89084872_89084872	13.4663	FOX{D1,D2}.p2	AK079266|Efna1|13636|ephrin A1	NM_001162425|Efna1|13636|ephrin A1
mm9_v1_chr15_-_66392539_66392625	13.2849	FOX{D1,D2}.p2	BC117823|Tmem71|213068|transmembrane protein 71	BC117824|Tmem71|213068|transmembrane protein 71	AK170268|Tmem71|213068|transmembrane protein 71	AK088711|Tmem71|213068|transmembrane protein 71	NM_172514|Tmem71|213068|transmembrane protein 71
mm9_v1_chr6_+_68375560_68375603	13.0962	FOX{D1,D2}.p2	M19911|Igkv16-104|381778|immunoglobulin kappa variable 16-104	X14621|Igkv16-104|381778|immunoglobulin kappa variable 16-104
mm9_v1_chr3_+_52072251_52072295	13.0453	FOX{D1,D2}.p2	AK154041|Foxo1|56458|forkhead box O1	NM_019739|Foxo1|56458|forkhead box O1	AJ252157|Foxo1|56458|forkhead box O1
mm9_v1_chr4_+_133871031_133871138	12.8272	FOX{D1,D2}.p2	NM_001039048|Trim63|433766|tripartite motif-containing 63	BC147663|Trim63|433766|tripartite motif-containing 63	BC147666|Trim63|433766|tripartite motif-containing 63	AK052911|Trim63|433766|tripartite motif-containing 63	DQ229108|Trim63|433766|tripartite motif-containing 63
mm9_v1_chr5_+_20878459_20878530	12.8178	FOX{D1,D2}.p2	AK009500|Fgl2|14190|fibrinogen-like protein 2	BC028893|Fgl2|14190|fibrinogen-like protein 2	NM_008013|Fgl2|14190|fibrinogen-like protein 2	AK036402|Fgl2|14190|fibrinogen-like protein 2	AK036784|Fgl2|14190|fibrinogen-like protein 2
mm9_v1_chr9_-_45763300_45763376	12.6709	FOX{D1,D2}.p2	AK081177|Sidt2|214597|SID1 transmembrane family, member 2	BC023957|Sidt2|214597|SID1 transmembrane family, member 2	NM_172257|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr6_+_34813131_34813171	12.4578	FOX{D1,D2}.p2	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr16_+_24448176_24448242	12.3977	FOX{D1,D2}.p2	AK054550|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145952|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	BC085321|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr2_-_51828671_51828727	12.2989	FOX{D1,D2}.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr19_-_38199737_38199810	11.7714	FOX{D1,D2}.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr19_+_46697882_46697901	11.4309	FOX{D1,D2}.p2	AK078491|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK142695|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_001177813|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK052400|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr5_-_91069499_91069680	11.4252	FOX{D1,D2}.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr4_-_59562054_59562263	11.336	FOX{D1,D2}.p2	BC057641|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	BC006638|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK033732|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK088560|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_144904|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_178164|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)
mm9_v1_chr11_+_94811409_94811411	11.1112	FOX{D1,D2}.p2	U03419|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr3_-_29912113_29912128	10.9216	FOX{D1,D2}.p2	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr17_+_34400152_34400289	10.8889	FOX{D1,D2}.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr3_-_29911982_29912077	10.8003	FOX{D1,D2}.p2	AK051098|Mecom|14013|MDS1 and EVI1 complex locus	BC076620|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr3_-_101091814_101091861	10.7971	FOX{D1,D2}.p2	X06143|Cd2|12481|CD2 antigen	BC053731|Cd2|12481|CD2 antigen	M18934|Cd2|12481|CD2 antigen	AK138728|Cd2|12481|CD2 antigen	AF065906|Cd2|12481|CD2 antigen	AF065907|Cd2|12481|CD2 antigen	AF065908|Cd2|12481|CD2 antigen	AF065909|Cd2|12481|CD2 antigen	AF306543|Cd2|12481|CD2 antigen	NM_013486|Cd2|12481|CD2 antigen	Y00023|Cd2|12481|CD2 antigen
mm9_v1_chr17_+_29629987_29630031	10.7911	FOX{D1,D2}.p2	AK154127|Pim1|18712|proviral integration site 1
mm9_v1_chr2_-_52194317_52194317	10.7595	FOX{D1,D2}.p2	NM_010889|Neb|17996|nebulin
mm9_v1_chr5_+_31554072_31554103	10.6987	FOX{D1,D2}.p2	BC016516|Krtcap3|69815|keratinocyte associated protein 3	NM_027221|Krtcap3|69815|keratinocyte associated protein 3	AK007999|Krtcap3|69815|keratinocyte associated protein 3	BC107024|Krtcap3|69815|keratinocyte associated protein 3	BC107025|Krtcap3|69815|keratinocyte associated protein 3	BC027812|Krtcap3|69815|keratinocyte associated protein 3
mm9_v1_chr11_-_106576550_106576578	10.685	FOX{D1,D2}.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr6_+_34548512_34548642	10.5482	FOX{D1,D2}.p2	AK032849|Cald1|109624|caldesmon 1	AK050642|Cald1|109624|caldesmon 1	BC055908|Cald1|109624|caldesmon 1
mm9_v1_chr17_+_35331446_35331471	10.1779	FOX{D1,D2}.p2	NM_008518|Ltb|16994|lymphotoxin B	U16985|Ltb|16994|lymphotoxin B	BC064062|Ltb|16994|lymphotoxin B	BC114919|Ltb|16994|lymphotoxin B
mm9_v1_chr7_-_91838299_91838364	10.1362	FOX{D1,D2}.p2	BC010683|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr11_-_106576464_106576537	9.97776	FOX{D1,D2}.p2	L06039|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr9_+_50302624_50302649	9.96526	FOX{D1,D2}.p2	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr7_-_26175113_26175168	9.90537	FOX{D1,D2}.p2	BC021642|Lipe|16890|lipase, hormone sensitive	AK169858|Lipe|16890|lipase, hormone sensitive	NM_001039507|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr7_+_82600419_82600490	9.80475	FOX{D1,D2}.p2	NM_029332|Akap13|75547|A kinase (PRKA) anchor protein 13	AK157986|Akap13|75547|A kinase (PRKA) anchor protein 13	AK172125|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr2_-_51828440_51828551	9.73213	FOX{D1,D2}.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr15_-_58046428_58046480	9.64518	FOX{D1,D2}.p2	AK014793|Fbxo32|67731|F-box protein 32	NM_026346|Fbxo32|67731|F-box protein 32	AF441120|Fbxo32|67731|F-box protein 32
mm9_v1_chr1_-_196957466_196957592	9.63504	FOX{D1,D2}.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr1_-_54983048_54983087	9.53978	FOX{D1,D2}.p2	BC157918|Ankrd44|329154|ankyrin repeat domain 44	BC157951|Ankrd44|329154|ankyrin repeat domain 44	BC172102|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr15_-_97662101_97662197	9.44582	FOX{D1,D2}.p2	BC057332|Hdac7|56233|histone deacetylase 7	NM_019572|Hdac7|56233|histone deacetylase 7	AY943912|Hdac7|56233|histone deacetylase 7
mm9_v1_chr6_+_70676428_70676433	9.38064	FOX{D1,D2}.p2	
mm9_v1_chr11_-_106576585_106576603	9.07779	FOX{D1,D2}.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr10_-_92773579_92773713	9.04772	FOX{D1,D2}.p2	AK052546|Elk3|13713|ELK3, member of ETS oncogene family	S82864|Elk3|13713|ELK3, member of ETS oncogene family	AK133847|Elk3|13713|ELK3, member of ETS oncogene family	BC053402|Elk3|13713|ELK3, member of ETS oncogene family	BC055735|Elk3|13713|ELK3, member of ETS oncogene family	AK088129|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr7_-_87547589_87547748	9.01091	FOX{D1,D2}.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr12_-_32635399_32635399	8.95981	FOX{D1,D2}.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr5_-_17394776_17394776	8.90895	FOX{D1,D2}.p2	NM_001159558|Cd36|12491|CD36 antigen
mm9_v1_chr2_+_127951773_127951787	8.88753	FOX{D1,D2}.p2	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr11_+_87895626_87895848	8.87064	FOX{D1,D2}.p2	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr4_+_132686434_132686575	8.77013	FOX{D1,D2}.p2	AK150140|Wasf2|242687|WAS protein family, member 2	BC051488|Wasf2|242687|WAS protein family, member 2	AK172187|Wasf2|242687|WAS protein family, member 2	AK085458|Wasf2|242687|WAS protein family, member 2	NM_153423|Wasf2|242687|WAS protein family, member 2
mm9_v1_chr12_-_56087322_56087322	8.75126	FOX{D1,D2}.p2	AK135668|Baz1a|217578|bromodomain adjacent to zinc finger domain 1A	NM_013815|Baz1a|217578|bromodomain adjacent to zinc finger domain 1A
mm9_v1_chr14_+_34899165_34899231	8.71608	FOX{D1,D2}.p2	BC030407|Anxa8|11752|annexin A8	NM_013473|Anxa8|11752|annexin A8	AJ002390|Anxa8|11752|annexin A8	AK009085|Anxa8|11752|annexin A8	BC013271|Anxa8|11752|annexin A8	AK075870|Anxa8|11752|annexin A8
mm9_v1_chr10_-_92773778_92773948	8.68575	FOX{D1,D2}.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr11_-_120587426_120587428	8.6262	FOX{D1,D2}.p2	
mm9_v1_chr11_+_98245124_98245152	8.60657	FOX{D1,D2}.p2	AJ223854|Tcap|21393|titin-cap	NM_011540|Tcap|21393|titin-cap	AK010167|Tcap|21393|titin-cap	Y15845|Tcap|21393|titin-cap	BC027631|Tcap|21393|titin-cap	BC032992|Tcap|21393|titin-cap
mm9_v1_chr7_-_97103461_97103540	8.58776	FOX{D1,D2}.p2	
mm9_v1_chr6_-_52184909_52184937	8.56323	FOX{D1,D2}.p2	BC050839|Hoxa10|15395|homeobox A10	L08757|Hoxa10|15395|homeobox A10	NM_008263|Hoxa10|15395|homeobox A10
mm9_v1_chr12_-_32635061_32635121	8.53716	FOX{D1,D2}.p2	AK028949|Hbp1|73389|high mobility group box transcription factor 1	AK132503|Hbp1|73389|high mobility group box transcription factor 1	AK139211|Hbp1|73389|high mobility group box transcription factor 1	AK142187|Hbp1|73389|high mobility group box transcription factor 1	AK053005|Hbp1|73389|high mobility group box transcription factor 1	AK028674|Hbp1|73389|high mobility group box transcription factor 1	BC026853|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr2_+_35163157_35163164	8.53022	FOX{D1,D2}.p2	AK205294|Gsn|227753|gelsolin
mm9_v1_chr11_+_82724754_82724832	8.52902	FOX{D1,D2}.p2	NM_178680|Unc45b|217012|unc-45 homolog B (C. elegans)	AK084418|Unc45b|217012|unc-45 homolog B (C. elegans)	AK168968|Unc45b|217012|unc-45 homolog B (C. elegans)	AK081821|Unc45b|217012|unc-45 homolog B (C. elegans)	AK169274|Unc45b|217012|unc-45 homolog B (C. elegans)	AK052294|Unc45b|217012|unc-45 homolog B (C. elegans)	BC084585|Unc45b|217012|unc-45 homolog B (C. elegans)
mm9_v1_chr1_+_173155414_173155449	8.46495	FOX{D1,D2}.p2	X04119|Apoa2|11807|apolipoprotein A-II	S79794|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr15_+_79178063_79178107	8.45553	FOX{D1,D2}.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr19_-_38117813_38117907	8.44534	FOX{D1,D2}.p2	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr6_+_122463595_122463620	8.42881	FOX{D1,D2}.p2	AK011458|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr6_+_113102884_113103027	8.38875	FOX{D1,D2}.p2	AK088328|Setd5|72895|SET domain containing 5
mm9_v1_chr9_-_45762994_45763069	8.38414	FOX{D1,D2}.p2	BC051101|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr10_-_67599315_67599344	8.26694	FOX{D1,D2}.p2	AK162717|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr2_-_163470870_163470922	8.23516	FOX{D1,D2}.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr12_+_113917038_113917088	8.11845	FOX{D1,D2}.p2	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr11_-_106576380_106576409	8.0853	FOX{D1,D2}.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr11_+_28821585_28821724	8.0828	FOX{D1,D2}.p2	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr1_+_89999782_89999852	8.02367	FOX{D1,D2}.p2	NM_201410|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B	BC026561|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm9_v1_chr10_-_24647173_24647229	8.01008	FOX{D1,D2}.p2	CT010173|Arg1|11846|arginase, liver
mm9_v1_chr15_+_61816895_61816942	7.98901	FOX{D1,D2}.p2	NM_001177352|Myc|17869|myelocytomatosis oncogene	NM_001177353|Myc|17869|myelocytomatosis oncogene	NM_001177354|Myc|17869|myelocytomatosis oncogene	NM_010849|Myc|17869|myelocytomatosis oncogene	X01023|Myc|17869|myelocytomatosis oncogene	AK145084|Myc|17869|myelocytomatosis oncogene
mm9_v1_chr15_+_3220766_3220979	7.96513	FOX{D1,D2}.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr9_-_45763233_45763277	7.93924	FOX{D1,D2}.p2	AK155875|Sidt2|214597|SID1 transmembrane family, member 2	AK152371|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr8_+_47619706_47619715	7.82862	FOX{D1,D2}.p2	
mm9_v1_chr2_+_133378934_133378934	7.79477	FOX{D1,D2}.p2	BC100344|Bmp2|12156|bone morphogenetic protein 2	NM_007553|Bmp2|12156|bone morphogenetic protein 2
mm9_v1_chr3_-_145312928_145312948	7.79058	FOX{D1,D2}.p2	BC066019|Cyr61|16007|cysteine rich protein 61	BC003205|Cyr61|16007|cysteine rich protein 61	AK156723|Cyr61|16007|cysteine rich protein 61	AK159452|Cyr61|16007|cysteine rich protein 61	M32490|Cyr61|16007|cysteine rich protein 61	NM_010516|Cyr61|16007|cysteine rich protein 61
mm9_v1_chr15_+_79177959_79178004	7.77688	FOX{D1,D2}.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr4_-_49562319_49562386	7.75376	FOX{D1,D2}.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr11_+_74433123_74433211	7.63986	FOX{D1,D2}.p2	BC150886|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene
mm9_v1_chr7_+_97357406_97357492	7.62206	FOX{D1,D2}.p2	AK163129|Picalm|233489|phosphatidylinositol binding clathrin assembly protein
mm9_v1_chr11_+_96790581_96790782	7.60364	FOX{D1,D2}.p2	AK090284|Prr15l|217138|proline rich 15-like	BC034213|Prr15l|217138|proline rich 15-like	AK077279|Prr15l|217138|proline rich 15-like	BC022765|Prr15l|217138|proline rich 15-like	NM_146026|Prr15l|217138|proline rich 15-like	BC036171|Prr15l|217138|proline rich 15-like	BC034192|Prr15l|217138|proline rich 15-like	BC024510|Prr15l|217138|proline rich 15-like	AK087566|Prr15l|217138|proline rich 15-like
mm9_v1_chr1_+_132762353_132762436	7.58858	FOX{D1,D2}.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr3_+_19857053_19857266	7.45915	FOX{D1,D2}.p2	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr18_+_60535680_60535700	7.44183	FOX{D1,D2}.p2	AK172047|Iigp1|60440|interferon inducible GTPase 1	AK013785|Iigp1|60440|interferon inducible GTPase 1	AK153060|Iigp1|60440|interferon inducible GTPase 1	AK156611|Iigp1|60440|interferon inducible GTPase 1	NM_001146275|Iigp1|60440|interferon inducible GTPase 1	NM_021792|Iigp1|60440|interferon inducible GTPase 1	AJ007971|Iigp1|60440|interferon inducible GTPase 1
mm9_v1_chrX_+_160578411_160578593	7.42924	FOX{D1,D2}.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr12_-_87419813_87420026	7.39829	FOX{D1,D2}.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr5_+_139865857_139865857	7.39164	FOX{D1,D2}.p2	AK137454|Gpr146|80290|G protein-coupled receptor 146	NM_001038703|Gpr146|80290|G protein-coupled receptor 146
mm9_v1_chr1_+_173155184_173155238	7.37374	FOX{D1,D2}.p2	NM_013474|Apoa2|11807|apolipoprotein A-II	M79361|Apoa2|11807|apolipoprotein A-II	M79362|Apoa2|11807|apolipoprotein A-II	AK145823|Apoa2|11807|apolipoprotein A-II	X62772|Apoa2|11807|apolipoprotein A-II	BC031786|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr2_+_121854287_121854425	7.30968	FOX{D1,D2}.p2	AK148004|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK154934|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK161038|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	NM_144545|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	BC080788|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK147154|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK019219|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J
mm9_v1_chr4_-_49562400_49562417	7.28612	FOX{D1,D2}.p2	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr7_-_52359079_52359191	7.27793	FOX{D1,D2}.p2	BC003786|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	D37874|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK152879|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK146933|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008167|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008360|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	NM_010189|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter
mm9_v1_chr1_+_132762248_132762329	7.19705	FOX{D1,D2}.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr12_+_35731853_35731876	7.15685	FOX{D1,D2}.p2	AK154425|Snx13|217463|sorting nexin 13	NM_001014973|Snx13|217463|sorting nexin 13	AK166180|Snx13|217463|sorting nexin 13	BC067201|Snx13|217463|sorting nexin 13
mm9_v1_chr19_-_34329804_34329828	7.13975	FOX{D1,D2}.p2	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chrX_-_137077639_137077729	7.13675	FOX{D1,D2}.p2	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr6_-_72383243_72383360	7.12132	FOX{D1,D2}.p2	AK191201|Mat2a|232087|methionine adenosyltransferase II, alpha	AK191379|Mat2a|232087|methionine adenosyltransferase II, alpha	AK192240|Mat2a|232087|methionine adenosyltransferase II, alpha	AK195580|Mat2a|232087|methionine adenosyltransferase II, alpha	AK196623|Mat2a|232087|methionine adenosyltransferase II, alpha	AK197103|Mat2a|232087|methionine adenosyltransferase II, alpha	AK200816|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203805|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203913|Mat2a|232087|methionine adenosyltransferase II, alpha	AK201922|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr15_+_61817102_61817119	7.05913	FOX{D1,D2}.p2	AK087961|Myc|17869|myelocytomatosis oncogene	AK133952|Myc|17869|myelocytomatosis oncogene
mm9_v1_chr7_+_86058650_86058744	7.02281	FOX{D1,D2}.p2	NM_020583|Isg20|57444|interferon-stimulated protein	BC022751|Isg20|57444|interferon-stimulated protein	AK136756|Isg20|57444|interferon-stimulated protein
mm9_v1_chr14_+_31692725_31692734	6.96503	FOX{D1,D2}.p2	AK003945|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1	AK003360|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1	BC116939|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1	BC116941|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1
mm9_v1_chr1_+_180179405_180179521	6.87685	FOX{D1,D2}.p2	AK213642|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr4_+_64785207_64785207	6.83436	FOX{D1,D2}.p2	NM_021362|Pappa|18491|pregnancy-associated plasma protein A
mm9_v1_chr15_+_3220999_3221005	6.83315	FOX{D1,D2}.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr5_+_116005777_116005859	6.81543	FOX{D1,D2}.p2	AK194144|Pxn|19303|paxillin	AK205143|Pxn|19303|paxillin	AK219507|Pxn|19303|paxillin
mm9_v1_chr1_+_90097175_90097211	6.80637	FOX{D1,D2}.p2	AY227195|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	AK002629|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	NM_013701|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC138676|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC145969|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	D87866|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2
mm9_v1_chr1_+_52176281_52176465	6.80405	FOX{D1,D2}.p2	AK039458|Stat1|20846|signal transducer and activator of transcription 1	NM_009283|Stat1|20846|signal transducer and activator of transcription 1	AK159887|Stat1|20846|signal transducer and activator of transcription 1	AK082706|Stat1|20846|signal transducer and activator of transcription 1	AK018544|Stat1|20846|signal transducer and activator of transcription 1	AK041599|Stat1|20846|signal transducer and activator of transcription 1	AK041814|Stat1|20846|signal transducer and activator of transcription 1	AK084855|Stat1|20846|signal transducer and activator of transcription 1	BC004808|Stat1|20846|signal transducer and activator of transcription 1	AK088874|Stat1|20846|signal transducer and activator of transcription 1	AK157458|Stat1|20846|signal transducer and activator of transcription 1	AK157263|Stat1|20846|signal transducer and activator of transcription 1	AK046517|Stat1|20846|signal transducer and activator of transcription 1
mm9_v1_chr13_-_94269673_94269706	6.78183	FOX{D1,D2}.p2	BC020052|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr17_-_34134101_34134261	6.75746	FOX{D1,D2}.p2	M23894|H2-K1|14972|histocompatibility 2, K1, K region	M23895|H2-K1|14972|histocompatibility 2, K1, K region	M23896|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr15_+_3220994_3220998	6.74533	FOX{D1,D2}.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr19_+_5877812_5877838	6.73209	FOX{D1,D2}.p2	AK133879|Slc25a45|107375|solute carrier family 25, member 45	AK155754|Slc25a45|107375|solute carrier family 25, member 45	AK169876|Slc25a45|107375|solute carrier family 25, member 45	AK170869|Slc25a45|107375|solute carrier family 25, member 45
mm9_v1_chr6_+_70648433_70648461	6.72268	FOX{D1,D2}.p2	M83099|Igkv3-2|626583|immunoglobulin kappa variable 3-2
mm9_v1_chr12_-_102988893_102988980	6.71916	FOX{D1,D2}.p2	AK192839|Fbln5|23876|fibulin 5	AK207450|Fbln5|23876|fibulin 5	AK207544|Fbln5|23876|fibulin 5
mm9_v1_chr1_+_45401659_45401671	6.71681	FOX{D1,D2}.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr2_-_84614976_84615011	6.71022	FOX{D1,D2}.p2	AK165744|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AK144292|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr10_+_96945057_96945132	6.67917	FOX{D1,D2}.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr7_-_26573483_26573751	6.60816	FOX{D1,D2}.p2	AK186931|Axl|26362|AXL receptor tyrosine kinase	X63535|Axl|26362|AXL receptor tyrosine kinase	BC050914|Axl|26362|AXL receptor tyrosine kinase	BC046618|Axl|26362|AXL receptor tyrosine kinase	AK155567|Axl|26362|AXL receptor tyrosine kinase	BC058230|Axl|26362|AXL receptor tyrosine kinase	AK170897|Axl|26362|AXL receptor tyrosine kinase	AK033237|Axl|26362|AXL receptor tyrosine kinase	AK170010|Axl|26362|AXL receptor tyrosine kinase	NM_001190974|Axl|26362|AXL receptor tyrosine kinase	NM_001190975|Axl|26362|AXL receptor tyrosine kinase	NM_009465|Axl|26362|AXL receptor tyrosine kinase
mm9_v1_chr15_-_97661807_97661936	6.59259	FOX{D1,D2}.p2	AF207749|Hdac7|56233|histone deacetylase 7	AK040406|Hdac7|56233|histone deacetylase 7	AK150041|Hdac7|56233|histone deacetylase 7	AK036586|Hdac7|56233|histone deacetylase 7	AK044287|Hdac7|56233|histone deacetylase 7
mm9_v1_chr15_+_80541675_80541764	6.50445	FOX{D1,D2}.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr2_-_59963586_59963753	6.49093	FOX{D1,D2}.p2	BC150814|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK029386|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK134250|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK173180|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK030867|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr2_-_84662710_84662808	6.49077	FOX{D1,D2}.p2	AK003989|Smtnl1|68678|smoothelin-like 1	BC002317|Smtnl1|68678|smoothelin-like 1	NM_024230|Smtnl1|68678|smoothelin-like 1
mm9_v1_chr7_+_148153974_148154146	6.47226	FOX{D1,D2}.p2	NM_001112715|Ifitm1|68713|interferon induced transmembrane protein 1	BC090972|Ifitm1|68713|interferon induced transmembrane protein 1	AK004121|Ifitm1|68713|interferon induced transmembrane protein 1	AK169960|Ifitm1|68713|interferon induced transmembrane protein 1	BC090258|Ifitm1|68713|interferon induced transmembrane protein 1
mm9_v1_chr2_+_69508174_69508176	6.41433	FOX{D1,D2}.p2	AK132646|Kbtbd10|228003|kelch repeat and BTB (POZ) domain containing 10	NM_001081087|Kbtbd10|228003|kelch repeat and BTB (POZ) domain containing 10
mm9_v1_chr6_-_48658182_48658205	6.37252	FOX{D1,D2}.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr1_-_164816645_164816658	6.36573	FOX{D1,D2}.p2	AK129026|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr14_+_75536138_75536231	6.36538	FOX{D1,D2}.p2	BC022943|Lcp1|18826|lymphocyte cytosolic protein 1	NM_008879|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr6_-_87793459_87793650	6.31057	FOX{D1,D2}.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr19_-_38118066_38118066	6.30385	FOX{D1,D2}.p2	NM_001099634|Myof|226101|myoferlin
mm9_v1_chr2_-_163470826_163470836	6.26506	FOX{D1,D2}.p2	BC011295|Serinc3|26943|serine incorporator 3
mm9_v1_chr19_+_5878465_5878648	6.26054	FOX{D1,D2}.p2	NM_134154|Slc25a45|107375|solute carrier family 25, member 45	BC037680|Slc25a45|107375|solute carrier family 25, member 45	BC022156|Slc25a45|107375|solute carrier family 25, member 45
mm9_v1_chr8_-_124948837_124948876	6.25827	FOX{D1,D2}.p2	
mm9_v1_chr5_-_148118681_148118824	6.24355	FOX{D1,D2}.p2	AK049574|Cdx2|12591|caudal type homeobox 2	BC103516|Cdx2|12591|caudal type homeobox 2	BC103517|Cdx2|12591|caudal type homeobox 2	BC103519|Cdx2|12591|caudal type homeobox 2	BC103520|Cdx2|12591|caudal type homeobox 2	AK049566|Cdx2|12591|caudal type homeobox 2	NM_007673|Cdx2|12591|caudal type homeobox 2
mm9_v1_chr17_-_34134309_34134502	6.22258	FOX{D1,D2}.p2	K01762|H2-K1|14972|histocompatibility 2, K1, K region	X00172|H2-K1|14972|histocompatibility 2, K1, K region	J00395|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr2_+_162758440_162758589	6.1991	FOX{D1,D2}.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr11_-_86621130_86621161	6.14798	FOX{D1,D2}.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr7_-_110962324_110962382	6.11083	FOX{D1,D2}.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr9_+_69137659_69137691	6.08561	FOX{D1,D2}.p2	Z82994|Rora|19883|RAR-related orphan receptor alpha
mm9_v1_chr18_+_61747381_61747495	6.0687	FOX{D1,D2}.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr1_+_59543450_59543567	6.04254	FOX{D1,D2}.p2	
mm9_v1_chr1_-_152840432_152840584	6.03299	FOX{D1,D2}.p2	BC147549|Hmcn1|545370|hemicentin 1	BC147568|Hmcn1|545370|hemicentin 1	AK052713|Hmcn1|545370|hemicentin 1	NM_001024720|Hmcn1|545370|hemicentin 1
mm9_v1_chr12_-_85791928_85791966	6.01821	FOX{D1,D2}.p2	AK128924|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK169915|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171896|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK155814|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK170305|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK082790|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK147146|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171581|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr11_-_100259048_100259060	6.00083	FOX{D1,D2}.p2	BC040757|Jup|16480|junction plakoglobin	NM_010593|Jup|16480|junction plakoglobin	BC094461|Jup|16480|junction plakoglobin
mm9_v1_chr3_+_96636596_96636596	5.99309	FOX{D1,D2}.p2	NM_001146001|Pdzk1|59020|PDZ domain containing 1
mm9_v1_chr1_-_71686889_71687012	5.95673	FOX{D1,D2}.p2	AK147249|Fn1|14268|fibronectin 1
mm9_v1_chr13_+_49704471_49704523	5.95094	FOX{D1,D2}.p2	AK075638|Ogn|18295|osteoglycin	AK163772|Ogn|18295|osteoglycin	D31951|Ogn|18295|osteoglycin	BC021939|Ogn|18295|osteoglycin
mm9_v1_chr14_+_56179818_56179917	5.91581	FOX{D1,D2}.p2	BC021305|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK152395|Dcaf11|28199|DDB1 and CUL4 associated factor 11	BC037001|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr2_-_163470787_163470825	5.90128	FOX{D1,D2}.p2	AB029499|Serinc3|26943|serine incorporator 3	AF181684|Serinc3|26943|serine incorporator 3	BC022901|Serinc3|26943|serine incorporator 3	AK170350|Serinc3|26943|serine incorporator 3	AK152720|Serinc3|26943|serine incorporator 3	AK159347|Serinc3|26943|serine incorporator 3	AK150106|Serinc3|26943|serine incorporator 3	AK155921|Serinc3|26943|serine incorporator 3	AK159488|Serinc3|26943|serine incorporator 3	AK159819|Serinc3|26943|serine incorporator 3	AK160005|Serinc3|26943|serine incorporator 3	AK160055|Serinc3|26943|serine incorporator 3	AK161981|Serinc3|26943|serine incorporator 3	AK164807|Serinc3|26943|serine incorporator 3	AK166924|Serinc3|26943|serine incorporator 3	AK145604|Serinc3|26943|serine incorporator 3
mm9_v1_chr7_+_120351012_120351092	5.87367	FOX{D1,D2}.p2	BC011080|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AK143267|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AB014494|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like
mm9_v1_chr5_-_66000506_66000618	5.86965	FOX{D1,D2}.p2	AK083707|B230308N11Rik|320060|RIKEN cDNA B230308N11 gene
mm9_v1_chr13_+_49639847_49640001	5.7909	FOX{D1,D2}.p2	AK014504|Aspn|66695|asporin	AK021386|Aspn|66695|asporin	AK085920|Aspn|66695|asporin	BC034888|Aspn|66695|asporin	BC145904|Aspn|66695|asporin	BC145930|Aspn|66695|asporin
mm9_v1_chr13_-_99585065_99585195	5.78715	FOX{D1,D2}.p2	AK142282|Fcho2|218503|FCH domain only 2	BC052456|Fcho2|218503|FCH domain only 2	BC053718|Fcho2|218503|FCH domain only 2	AK146566|Fcho2|218503|FCH domain only 2	AK164135|Fcho2|218503|FCH domain only 2	BC019933|Fcho2|218503|FCH domain only 2	BC047122|Fcho2|218503|FCH domain only 2
mm9_v1_chr5_-_87998014_87998030	5.77101	FOX{D1,D2}.p2	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr3_-_130951398_130951434	5.7563	FOX{D1,D2}.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr19_+_34365195_34365204	5.73673	FOX{D1,D2}.p2	AK002590|Fas|14102|Fas (TNF receptor superfamily member 6)	DQ846748|Fas|14102|Fas (TNF receptor superfamily member 6)	DQ846749|Fas|14102|Fas (TNF receptor superfamily member 6)
mm9_v1_chr15_+_79178408_79178527	5.7085	FOX{D1,D2}.p2	AK145835|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr1_+_136311948_136312075	5.67887	FOX{D1,D2}.p2	AK012847|Adipor1|72674|adiponectin receptor 1	AK143679|Adipor1|72674|adiponectin receptor 1	AK168069|Adipor1|72674|adiponectin receptor 1	NM_028320|Adipor1|72674|adiponectin receptor 1	AK151565|Adipor1|72674|adiponectin receptor 1	AY424290|Adipor1|72674|adiponectin receptor 1	BC014875|Adipor1|72674|adiponectin receptor 1	AK148140|Adipor1|72674|adiponectin receptor 1	AK167896|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr5_-_87997908_87998005	5.67786	FOX{D1,D2}.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr16_+_33829715_33830005	5.64166	FOX{D1,D2}.p2	AF022110|Itgb5|16419|integrin beta 5	NM_001145884|Itgb5|16419|integrin beta 5	NM_010580|Itgb5|16419|integrin beta 5	BC058246|Itgb5|16419|integrin beta 5	AK143532|Itgb5|16419|integrin beta 5	AK140251|Itgb5|16419|integrin beta 5	BC046280|Itgb5|16419|integrin beta 5	AF043256|Itgb5|16419|integrin beta 5	AF043257|Itgb5|16419|integrin beta 5	AK087476|Itgb5|16419|integrin beta 5
mm9_v1_chr7_+_130337876_130337891	5.64109	FOX{D1,D2}.p2	AK014218|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr15_-_96861590_96861647	5.6352	FOX{D1,D2}.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr14_+_56179739_56179780	5.62861	FOX{D1,D2}.p2	NM_001199009|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK150183|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr5_-_123439064_123439107	5.62733	FOX{D1,D2}.p2	BC065090|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK043352|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_001003953|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK136625|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr2_+_151398367_151398403	5.62728	FOX{D1,D2}.p2	BC005556|Sdcbp2|228765|syndecan binding protein (syntenin) 2	NM_145535|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK144452|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK160483|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK136572|Sdcbp2|228765|syndecan binding protein (syntenin) 2
mm9_v1_chr14_-_55725370_55725429	5.54811	FOX{D1,D2}.p2	AK052384|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	BC080798|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	BC108374|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	AK151844|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	AK147177|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	NM_007455|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit
mm9_v1_chr18_+_5046584_5046587	5.52444	FOX{D1,D2}.p2	AF317422|Svil|225115|supervillin	AF317423|Svil|225115|supervillin	NM_153153|Svil|225115|supervillin	HQ259291|Svil|225115|supervillin
mm9_v1_chr9_+_96096690_96096766	5.50651	FOX{D1,D2}.p2	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr5_+_3928053_3928072	5.48252	FOX{D1,D2}.p2	AK036995|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9
mm9_v1_chr9_+_69137694_69137758	5.39333	FOX{D1,D2}.p2	AK155827|Rora|19883|RAR-related orphan receptor alpha	BC003757|Rora|19883|RAR-related orphan receptor alpha	S82720|Rora|19883|RAR-related orphan receptor alpha	AK149294|Rora|19883|RAR-related orphan receptor alpha
mm9_v1_chr3_+_51465127_51465166	5.38599	FOX{D1,D2}.p2	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr1_+_19202046_19202134	5.37171	FOX{D1,D2}.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr12_-_85791897_85791926	5.35921	FOX{D1,D2}.p2	AF297860|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	NM_134042|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK164366|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK033587|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chrX_+_33428784_33428826	5.34404	FOX{D1,D2}.p2	AB116935|Dock11|75974|dedicator of cytokinesis 11	NM_001009947|Dock11|75974|dedicator of cytokinesis 11
mm9_v1_chr15_+_3230053_3230123	5.3371	FOX{D1,D2}.p2	
mm9_v1_chr2_-_33286793_33286890	5.31718	FOX{D1,D2}.p2	NM_001085507|Zbtb34|241311|zinc finger and BTB domain containing 34
mm9_v1_chr11_-_86621074_86621127	5.31202	FOX{D1,D2}.p2	BC058276|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK135592|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK031000|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK004610|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr10_-_87937335_87937390	5.27902	FOX{D1,D2}.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr6_-_39507815_39507904	5.25961	FOX{D1,D2}.p2	AK048041|Dennd2a|209773|DENN/MADD domain containing 2A	AK081176|Dennd2a|209773|DENN/MADD domain containing 2A	NM_172477|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr2_+_110561733_110561771	5.21537	FOX{D1,D2}.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr15_-_98748371_98748661	5.18787	FOX{D1,D2}.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr13_-_99585403_99585403	5.17577	FOX{D1,D2}.p2	AK031041|Fcho2|218503|FCH domain only 2	NM_172591|Fcho2|218503|FCH domain only 2
mm9_v1_chr15_-_53177711_53177759	5.133	FOX{D1,D2}.p2	AK132327|Ext1|14042|exostoses (multiple) 1	NM_010162|Ext1|14042|exostoses (multiple) 1
mm9_v1_chrX_-_159402465_159402479	5.12964	FOX{D1,D2}.p2	BC010751|S100g|12309|S100 calcium binding protein G
mm9_v1_chr7_-_110962416_110962439	5.09024	FOX{D1,D2}.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr4_+_118199847_118199895	5.07512	FOX{D1,D2}.p2	AK012175|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	NM_025572|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK147115|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK009128|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene
mm9_v1_chr6_-_71390481_71390504	5.0702	FOX{D1,D2}.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr6_+_145882641_145882808	5.06549	FOX{D1,D2}.p2	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr1_+_40522396_40522520	5.06502	FOX{D1,D2}.p2	AK089237|Il18r1|16182|interleukin 18 receptor 1	NM_001161842|Il18r1|16182|interleukin 18 receptor 1	AK170705|Il18r1|16182|interleukin 18 receptor 1	NM_001161843|Il18r1|16182|interleukin 18 receptor 1	BC023240|Il18r1|16182|interleukin 18 receptor 1
mm9_v1_chr2_-_163470841_163470868	5.0543	FOX{D1,D2}.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chr6_-_70741991_70742200	5.02308	FOX{D1,D2}.p2	BC053526|Rpia|19895|ribose 5-phosphate isomerase A	AK137235|Rpia|19895|ribose 5-phosphate isomerase A	L35034|Rpia|19895|ribose 5-phosphate isomerase A	NM_009075|Rpia|19895|ribose 5-phosphate isomerase A
mm9_v1_chr4_-_108790523_108790574	5.01874	FOX{D1,D2}.p2	BC026927|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr9_-_44611033_44611045	5.01455	FOX{D1,D2}.p2	BC024432|Ttc36|192653|tetratricopeptide repeat domain 36	NM_138951|Ttc36|192653|tetratricopeptide repeat domain 36	BC021613|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr18_+_9707674_9707679	5.0114	FOX{D1,D2}.p2	AB038519|Colec12|140792|collectin sub-family member 12
mm9_v1_chr11_+_85646309_85646316	4.99096	FOX{D1,D2}.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr10_-_76188683_76188791	4.97082	FOX{D1,D2}.p2	AK052924|Col6a1|12833|collagen, type VI, alpha 1	NM_009933|Col6a1|12833|collagen, type VI, alpha 1	X66405|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr10_+_79326950_79327079	4.96344	FOX{D1,D2}.p2	AK189870|Ptbp1|19205|polypyrimidine tract binding protein 1	AK190380|Ptbp1|19205|polypyrimidine tract binding protein 1	AK191581|Ptbp1|19205|polypyrimidine tract binding protein 1	AK192876|Ptbp1|19205|polypyrimidine tract binding protein 1	AK195492|Ptbp1|19205|polypyrimidine tract binding protein 1	AK198834|Ptbp1|19205|polypyrimidine tract binding protein 1	AK200806|Ptbp1|19205|polypyrimidine tract binding protein 1	AK204269|Ptbp1|19205|polypyrimidine tract binding protein 1	AK211894|Ptbp1|19205|polypyrimidine tract binding protein 1	AK217325|Ptbp1|19205|polypyrimidine tract binding protein 1	AK219665|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr2_+_17986187_17986431	4.94969	FOX{D1,D2}.p2	AK154320|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC055298|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK147388|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC069988|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF010135|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK220504|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK045042|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr9_-_101101334_101101402	4.92828	FOX{D1,D2}.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr6_+_4465627_4465644	4.89839	FOX{D1,D2}.p2	AK160814|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chrX_+_98449866_98450159	4.86806	FOX{D1,D2}.p2	AF114260|Foxo4|54601|forkhead box O4	NM_018789|Foxo4|54601|forkhead box O4	AK157830|Foxo4|54601|forkhead box O4	BC099460|Foxo4|54601|forkhead box O4	BC139275|Foxo4|54601|forkhead box O4	BC139304|Foxo4|54601|forkhead box O4	AB032770|Foxo4|54601|forkhead box O4	AB221664|Foxo4|54601|forkhead box O4
mm9_v1_chr11_-_100259061_100259098	4.86474	FOX{D1,D2}.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chr9_+_92502076_92502169	4.8341	FOX{D1,D2}.p2	
mm9_v1_chr12_-_27141303_27141316	4.83173	FOX{D1,D2}.p2	NM_021384|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr1_-_140516239_140516335	4.82657	FOX{D1,D2}.p2	BC037697|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK165583|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	BC026541|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK035502|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	NM_021605|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK078639|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK088173|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK149308|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7
mm9_v1_chr10_-_76175108_76175146	4.82195	FOX{D1,D2}.p2	BC002194|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr18_-_58169723_58169818	4.78841	FOX{D1,D2}.p2	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr15_+_35225852_35225866	4.77791	FOX{D1,D2}.p2	AK017286|Osr2|107587|odd-skipped related 2 (Drosophila)	AK052147|Osr2|107587|odd-skipped related 2 (Drosophila)	AK161267|Osr2|107587|odd-skipped related 2 (Drosophila)	AF370121|Osr2|107587|odd-skipped related 2 (Drosophila)	NM_054049|Osr2|107587|odd-skipped related 2 (Drosophila)
mm9_v1_chr18_-_80904852_80904931	4.76846	FOX{D1,D2}.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr3_+_95466898_95466910	4.75088	FOX{D1,D2}.p2	
mm9_v1_chr14_-_122314994_122315068	4.74422	FOX{D1,D2}.p2	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr6_+_122463663_122463700	4.73357	FOX{D1,D2}.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr5_+_115346942_115346944	4.72192	FOX{D1,D2}.p2	NM_011854|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AF068835|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr19_+_23215704_23215723	4.71277	FOX{D1,D2}.p2	AK028544|Klf9|16601|Kruppel-like factor 9	NM_010638|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr5_+_115347750_115347773	4.70766	FOX{D1,D2}.p2	AK160630|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr9_+_74823917_74823980	4.70207	FOX{D1,D2}.p2	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr4_-_108790578_108790640	4.69586	FOX{D1,D2}.p2	BC089163|Osbpl9|100273|oxysterol binding protein-like 9	AK035658|Osbpl9|100273|oxysterol binding protein-like 9	AK172010|Osbpl9|100273|oxysterol binding protein-like 9	NM_001134791|Osbpl9|100273|oxysterol binding protein-like 9	NM_173350|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr10_+_96944961_96945010	4.6918	FOX{D1,D2}.p2	NM_007833|Dcn|13179|decorin	AK147020|Dcn|13179|decorin
mm9_v1_chr2_-_59963796_59963833	4.6905	FOX{D1,D2}.p2	NM_001001182|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK147737|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chrX_+_39502588_39502859	4.68079	FOX{D1,D2}.p2	NM_001077712|Stag2|20843|stromal antigen 2	AK050415|Stag2|20843|stromal antigen 2	AK077318|Stag2|20843|stromal antigen 2	AK020968|Stag2|20843|stromal antigen 2	AK020316|Stag2|20843|stromal antigen 2
mm9_v1_chr18_+_9707574_9707671	4.66616	FOX{D1,D2}.p2	AK158366|Colec12|140792|collectin sub-family member 12	AK042772|Colec12|140792|collectin sub-family member 12	NM_130449|Colec12|140792|collectin sub-family member 12	BC009162|Colec12|140792|collectin sub-family member 12	BC057936|Colec12|140792|collectin sub-family member 12	AB078434|Colec12|140792|collectin sub-family member 12	AK141928|Colec12|140792|collectin sub-family member 12	BC060657|Colec12|140792|collectin sub-family member 12
mm9_v1_chr5_-_143579060_143579087	4.6364	FOX{D1,D2}.p2	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chr15_-_99609024_99609168	4.63498	FOX{D1,D2}.p2	AK181177|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr10_-_67599367_67599429	4.60308	FOX{D1,D2}.p2	AF401550|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr2_-_163450863_163450871	4.56323	FOX{D1,D2}.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr8_-_72657402_72657524	4.55987	FOX{D1,D2}.p2	
mm9_v1_chr15_-_98438063_98438063	4.54343	FOX{D1,D2}.p2	AK147516|Adcy6|11512|adenylate cyclase 6	NM_007405|Adcy6|11512|adenylate cyclase 6
mm9_v1_chr15_-_96529121_96529237	4.51349	FOX{D1,D2}.p2	AK164568|Slc38a2|67760|solute carrier family 38, member 2	AK018767|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr10_+_21601968_21601989	4.51252	FOX{D1,D2}.p2	BC070401|Sgk1|20393|serum/glucocorticoid regulated kinase 1	NM_001161845|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr1_-_182126032_182126150	4.49682	FOX{D1,D2}.p2	AK004791|Adck3|67426|aarF domain containing kinase 3	AK014605|Adck3|67426|aarF domain containing kinase 3	BC030937|Adck3|67426|aarF domain containing kinase 3	NM_023341|Adck3|67426|aarF domain containing kinase 3
mm9_v1_chr13_+_55311142_55311142	4.49344	FOX{D1,D2}.p2	AK145783|Nsd1|18193|nuclear receptor-binding SET-domain protein 1	NM_008739|Nsd1|18193|nuclear receptor-binding SET-domain protein 1
mm9_v1_chr11_-_107331865_107332065	4.47872	FOX{D1,D2}.p2	BC082333|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	BC108351|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AB077281|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK153625|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171918|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK172137|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	NM_145823|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171340|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr19_+_32694494_32694583	4.46883	FOX{D1,D2}.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr13_-_62959751_62959781	4.46357	FOX{D1,D2}.p2	AK168374|Fbp2|14120|fructose bisphosphatase 2	AK146946|Fbp2|14120|fructose bisphosphatase 2
mm9_v1_chr1_+_19093102_19093153	4.45526	FOX{D1,D2}.p2	AK132112|Tcfap2d|226896|transcription factor AP-2, delta	NM_153154|Tcfap2d|226896|transcription factor AP-2, delta	BC152324|Tcfap2d|226896|transcription factor AP-2, delta	BC152325|Tcfap2d|226896|transcription factor AP-2, delta
mm9_v1_chr6_-_48658211_48658242	4.43316	FOX{D1,D2}.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr1_-_196957694_196957780	4.4094	FOX{D1,D2}.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr19_+_7631935_7632013	4.40341	FOX{D1,D2}.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr13_-_61037894_61037926	4.40244	FOX{D1,D2}.p2	AY034577|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	X15591|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	BC028437|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK018801|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK132290|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK167433|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK167664|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK005471|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	NM_001145799|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr14_+_31692419_31692442	4.39142	FOX{D1,D2}.p2	NM_181390|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1
mm9_v1_chr15_+_25870456_25870763	4.38381	FOX{D1,D2}.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr6_-_52154325_52154433	4.38305	FOX{D1,D2}.p2	AK144356|Hoxa5|15402|homeobox A5	AB221550|Hoxa5|15402|homeobox A5	BC011063|Hoxa5|15402|homeobox A5
mm9_v1_chr12_-_105066203_105066249	4.37664	FOX{D1,D2}.p2	BC037008|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr10_+_23614493_23614678	4.35004	FOX{D1,D2}.p2	NM_011704|Vnn1|22361|vanin 1	AK145984|Vnn1|22361|vanin 1	AK002773|Vnn1|22361|vanin 1	AK167427|Vnn1|22361|vanin 1	AJ132098|Vnn1|22361|vanin 1	BC019203|Vnn1|22361|vanin 1
mm9_v1_chr3_-_92819586_92819610	4.32475	FOX{D1,D2}.p2	BC060280|Crct1|74175|cysteine-rich C-terminal 1	AK009010|Crct1|74175|cysteine-rich C-terminal 1	NM_028798|Crct1|74175|cysteine-rich C-terminal 1
mm9_v1_chr4_-_87452140_87452217	4.31829	FOX{D1,D2}.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr8_+_120225803_120225850	4.28427	FOX{D1,D2}.p2	Y09517|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	AK004950|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	NM_008290|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2
mm9_v1_chr8_+_126869136_126869244	4.26947	FOX{D1,D2}.p2	
mm9_v1_chr7_-_133591146_133591163	4.2576	FOX{D1,D2}.p2	AK160497|Atp2a1|11937|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
mm9_v1_chr7_+_17383134_17383219	4.2558	FOX{D1,D2}.p2	AK182604|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK179124|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK215163|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5
mm9_v1_chr3_-_129035406_129035666	4.24384	FOX{D1,D2}.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr11_-_5703677_5703735	4.23227	FOX{D1,D2}.p2	BC010750|Pgam2|56012|phosphoglycerate mutase 2	AK146703|Pgam2|56012|phosphoglycerate mutase 2	AK169019|Pgam2|56012|phosphoglycerate mutase 2	AF029843|Pgam2|56012|phosphoglycerate mutase 2
mm9_v1_chr11_-_102226475_102226594	4.21449	FOX{D1,D2}.p2	AK172456|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK171662|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK137542|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK171845|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK172395|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158184|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK157181|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158143|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	NM_011403|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1
mm9_v1_chr2_-_173053287_173053316	4.21166	FOX{D1,D2}.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr6_-_72382855_72382865	4.20182	FOX{D1,D2}.p2	
mm9_v1_chr7_-_149246905_149246979	4.19695	FOX{D1,D2}.p2	AK135483|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	BC037588|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	AF228503|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	NM_028308|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	AK012535|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr5_+_115347505_115347613	4.15828	FOX{D1,D2}.p2	BC034361|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK157649|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK010034|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK150492|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr7_-_35437859_35437910	4.15511	FOX{D1,D2}.p2	BC031749|Kctd15|233107|potassium channel tetramerisation domain containing 15	NM_146188|Kctd15|233107|potassium channel tetramerisation domain containing 15
mm9_v1_chr1_+_195128163_195128239	4.15436	FOX{D1,D2}.p2	NM_008484|Lamb3|16780|laminin, beta 3	U43298|Lamb3|16780|laminin, beta 3
mm9_v1_chr14_+_27813547_27813547	4.15217	FOX{D1,D2}.p2	NM_010420|Hesx1|15209|homeobox gene expressed in ES cells	U40720|Hesx1|15209|homeobox gene expressed in ES cells
mm9_v1_chr12_-_105101743_105101767	4.14842	FOX{D1,D2}.p2	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr1_+_40738460_40738469	4.13815	FOX{D1,D2}.p2	AK077026|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chr13_+_49639799_49639811	4.13779	FOX{D1,D2}.p2	NM_001172481|Aspn|66695|asporin	NM_025711|Aspn|66695|asporin
mm9_v1_chr1_+_167693876_167693939	4.13636	FOX{D1,D2}.p2	AK005388|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK010947|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK144101|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AF084524|Creg1|433375|cellular repressor of E1A-stimulated genes 1	BC027426|Creg1|433375|cellular repressor of E1A-stimulated genes 1	NM_011804|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK150006|Creg1|433375|cellular repressor of E1A-stimulated genes 1
mm9_v1_chr6_-_30193802_30193802	4.12828	FOX{D1,D2}.p2	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr12_+_35731926_35731945	4.12165	FOX{D1,D2}.p2	AK164161|Snx13|217463|sorting nexin 13
mm9_v1_chr13_-_94269616_94269653	4.10059	FOX{D1,D2}.p2	BC069906|Jmy|57748|junction-mediating and regulatory protein	BC090835|Jmy|57748|junction-mediating and regulatory protein	NM_021310|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr4_-_86315874_86315968	4.08355	FOX{D1,D2}.p2	BC054766|Plin2|11520|perilipin 2	AK152896|Plin2|11520|perilipin 2	BC047124|Plin2|11520|perilipin 2	AK152263|Plin2|11520|perilipin 2	AK090277|Plin2|11520|perilipin 2	AK002911|Plin2|11520|perilipin 2	AK150177|Plin2|11520|perilipin 2	AK152081|Plin2|11520|perilipin 2	AK152877|Plin2|11520|perilipin 2	AK154582|Plin2|11520|perilipin 2	M93275|Plin2|11520|perilipin 2	AK167140|Plin2|11520|perilipin 2	AK153222|Plin2|11520|perilipin 2	AK152982|Plin2|11520|perilipin 2	NM_007408|Plin2|11520|perilipin 2
mm9_v1_chr4_-_118162354_118162375	4.07606	FOX{D1,D2}.p2	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr15_+_101974616_101974616	4.06408	FOX{D1,D2}.p2	NM_008344|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr12_-_105101825_105101829	4.05563	FOX{D1,D2}.p2	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr6_+_97941776_97941914	4.0515	FOX{D1,D2}.p2	NM_008601|Mitf|17342|microphthalmia-associated transcription factor	U19875|Mitf|17342|microphthalmia-associated transcription factor	Z23066|Mitf|17342|microphthalmia-associated transcription factor	BC108976|Mitf|17342|microphthalmia-associated transcription factor	BC108977|Mitf|17342|microphthalmia-associated transcription factor	AB221657|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr19_-_44060949_44061012	4.04803	FOX{D1,D2}.p2	BC014692|Cpn1|93721|carboxypeptidase N, polypeptide 1	AB021969|Cpn1|93721|carboxypeptidase N, polypeptide 1	AF326477|Cpn1|93721|carboxypeptidase N, polypeptide 1	NM_030703|Cpn1|93721|carboxypeptidase N, polypeptide 1
mm9_v1_chr12_-_104976382_104976400	4.0306	FOX{D1,D2}.p2	NM_009244|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr12_-_102988596_102988615	4.02293	FOX{D1,D2}.p2	
mm9_v1_chr15_+_7090525_7090548	4.01701	FOX{D1,D2}.p2	D17444|Lifr|16880|leukemia inhibitory factor receptor	D26177|Lifr|16880|leukemia inhibitory factor receptor	S73495|Lifr|16880|leukemia inhibitory factor receptor	S73496|Lifr|16880|leukemia inhibitory factor receptor	NM_013584|Lifr|16880|leukemia inhibitory factor receptor	BC031929|Lifr|16880|leukemia inhibitory factor receptor
mm9_v1_chr5_-_146691425_146691448	4.0157	FOX{D1,D2}.p2	BC094062|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	X60452|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	BC010528|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	NM_007818|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	AK149433|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11
mm9_v1_chr9_+_70526702_70526924	3.9893	FOX{D1,D2}.p2	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr7_+_75097142_75097267	3.97207	FOX{D1,D2}.p2	NM_010513|Igf1r|16001|insulin-like growth factor I receptor
mm9_v1_chr3_-_57379600_57379797	3.96134	FOX{D1,D2}.p2	AK213529|Wwtr1|97064|WW domain containing transcription regulator 1	BC004640|Wwtr1|97064|WW domain containing transcription regulator 1	AK142720|Wwtr1|97064|WW domain containing transcription regulator 1	AK009983|Wwtr1|97064|WW domain containing transcription regulator 1	AJ299430|Wwtr1|97064|WW domain containing transcription regulator 1	BC014727|Wwtr1|97064|WW domain containing transcription regulator 1	AK011504|Wwtr1|97064|WW domain containing transcription regulator 1	NM_133784|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr4_+_154963369_154963462	3.95992	FOX{D1,D2}.p2	AK180033|Nadk|192185|NAD kinase
mm9_v1_chr10_+_101621491_101621538	3.95935	FOX{D1,D2}.p2	NM_001162368|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK015051|4930402I19Rik|73798|RIKEN cDNA 4930402I19 gene
mm9_v1_chr19_-_41922577_41922621	3.95031	FOX{D1,D2}.p2	BC034214|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	BC085510|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	AK081171|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	NM_177603|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2
mm9_v1_chr6_+_117856781_117856883	3.93687	FOX{D1,D2}.p2	NM_001166430|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166431|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_133834|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC032197|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC023793|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC025481|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC042689|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC047346|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr8_-_46347363_46347377	3.93591	FOX{D1,D2}.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr8_-_46347384_46347394	3.93465	FOX{D1,D2}.p2	AK005546|F11|109821|coagulation factor XI	NM_028066|F11|109821|coagulation factor XI
mm9_v1_chr19_+_11518042_11518091	3.93431	FOX{D1,D2}.p2	AK088780|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK080934|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	NM_021718|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK039824|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK037569|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK138737|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK172495|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF230640|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF237913|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF354929|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	BC028433|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK088631|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B
mm9_v1_chr5_+_87233514_87233581	3.912	FOX{D1,D2}.p2	NM_177680|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr1_+_133867185_133867185	3.90505	FOX{D1,D2}.p2	BC031381|Slc45a3|212980|solute carrier family 45, member 3	NM_145977|Slc45a3|212980|solute carrier family 45, member 3
mm9_v1_chr16_-_88563421_88563427	3.86902	FOX{D1,D2}.p2	AK133810|Cldn8|54420|claudin 8	NM_018778|Cldn8|54420|claudin 8
mm9_v1_chr7_-_88060541_88060574	3.85955	FOX{D1,D2}.p2	AK184425|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr19_+_7131270_7131299	3.85401	FOX{D1,D2}.p2	AK052998|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr9_-_44611055_44611072	3.85007	FOX{D1,D2}.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr14_-_9091345_9091363	3.84942	FOX{D1,D2}.p2	BC021339|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	NM_001161667|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr1_+_154622471_154622540	3.8489	FOX{D1,D2}.p2	
mm9_v1_chr1_+_40738476_40738556	3.83455	FOX{D1,D2}.p2	BC103685|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC104737|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC105676|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_001033289|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chrX_-_71618617_71618655	3.82447	FOX{D1,D2}.p2	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr6_-_71390592_71390638	3.81613	FOX{D1,D2}.p2	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr12_+_35731888_35731920	3.81566	FOX{D1,D2}.p2	AK148157|Snx13|217463|sorting nexin 13	AK170737|Snx13|217463|sorting nexin 13	BC056394|Snx13|217463|sorting nexin 13
mm9_v1_chr11_+_69778280_69778280	3.81265	FOX{D1,D2}.p2	NM_001193619|Cldn7|53624|claudin 7
mm9_v1_chr15_-_102062309_102062327	3.8079	FOX{D1,D2}.p2	M95632|Itgb7|16421|integrin beta 7	M95633|Itgb7|16421|integrin beta 7	M68903|Itgb7|16421|integrin beta 7
mm9_v1_chr13_-_62959656_62959744	3.78295	FOX{D1,D2}.p2	AJ132692|Fbp2|14120|fructose bisphosphatase 2	D42083|Fbp2|14120|fructose bisphosphatase 2	BC012720|Fbp2|14120|fructose bisphosphatase 2	AK166898|Fbp2|14120|fructose bisphosphatase 2	NM_007994|Fbp2|14120|fructose bisphosphatase 2	AK166973|Fbp2|14120|fructose bisphosphatase 2
mm9_v1_chr7_+_148645664_148645872	3.77804	FOX{D1,D2}.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr13_-_3892788_3892823	3.77764	FOX{D1,D2}.p2	AJ010045|Net1|56349|neuroepithelial cell transforming gene 1	AK020636|Net1|56349|neuroepithelial cell transforming gene 1	AK088632|Net1|56349|neuroepithelial cell transforming gene 1	AK139921|Net1|56349|neuroepithelial cell transforming gene 1	BC004699|Net1|56349|neuroepithelial cell transforming gene 1	AK082128|Net1|56349|neuroepithelial cell transforming gene 1	NM_001047159|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chr10_+_79326772_79326782	3.77646	FOX{D1,D2}.p2	AK205993|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr1_+_136312291_136312502	3.76773	FOX{D1,D2}.p2	AK143680|Adipor1|72674|adiponectin receptor 1	AK181422|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr7_+_86058817_86058936	3.76447	FOX{D1,D2}.p2	AK005528|Isg20|57444|interferon-stimulated protein
mm9_v1_chr6_+_83293025_83293050	3.75537	FOX{D1,D2}.p2	BC011285|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr2_+_34729897_34729955	3.75439	FOX{D1,D2}.p2	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr16_+_20097626_20097705	3.74381	FOX{D1,D2}.p2	NM_029436|Klhl24|75785|kelch-like 24 (Drosophila)	AK015239|Klhl24|75785|kelch-like 24 (Drosophila)	AK044892|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr3_+_84470113_84470209	3.73754	FOX{D1,D2}.p2	AK081441|Tmem154|320782|transmembrane protein 154	NM_177260|Tmem154|320782|transmembrane protein 154	AK171510|Tmem154|320782|transmembrane protein 154	BC113174|Tmem154|320782|transmembrane protein 154	BC113175|Tmem154|320782|transmembrane protein 154	AK154236|Tmem154|320782|transmembrane protein 154	AK037111|Tmem154|320782|transmembrane protein 154
mm9_v1_chr5_+_92760866_92760867	3.70671	FOX{D1,D2}.p2	AK016257|Art3|109979|ADP-ribosyltransferase 3	AK040709|Art3|109979|ADP-ribosyltransferase 3	NM_181728|Art3|109979|ADP-ribosyltransferase 3	DQ519368|Art3|109979|ADP-ribosyltransferase 3	DQ519369|Art3|109979|ADP-ribosyltransferase 3	DQ810295|Art3|109979|ADP-ribosyltransferase 3
mm9_v1_chr12_-_85741801_85741813	3.69511	FOX{D1,D2}.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr16_+_30065419_30065442	3.68976	FOX{D1,D2}.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr11_-_105042428_105042746	3.6778	FOX{D1,D2}.p2	BC099431|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK156756|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK148336|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK006771|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene
mm9_v1_chr1_+_175603760_175603841	3.67207	FOX{D1,D2}.p2	AK041099|Pydc3|100033459|pyrin domain containing 3	NM_001162938|Pydc3|100033459|pyrin domain containing 3
mm9_v1_chr12_+_77182878_77182935	3.66508	FOX{D1,D2}.p2	FJ848978|Syne2|319565|synaptic nuclear envelope 2
mm9_v1_chr18_-_39649499_39649545	3.65118	FOX{D1,D2}.p2	AK156323|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr12_-_105011767_105011793	3.6479	FOX{D1,D2}.p2	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr12_-_27141277_27141301	3.64706	FOX{D1,D2}.p2	AF442152|Rsad2|58185|radical S-adenosyl methionine domain containing 2	CT010378|Rsad2|58185|radical S-adenosyl methionine domain containing 2	BC057868|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AF236064|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152600|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK010906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK036373|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150406|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150616|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150835|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151185|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151286|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151331|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151339|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151412|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151538|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151770|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151825|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151833|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151846|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151909|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151940|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152050|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152075|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152235|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152310|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152354|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152631|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152796|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152861|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152880|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152962|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153077|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153078|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153306|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153350|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK159147|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150812|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152493|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152601|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK149900|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150069|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150347|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150425|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150525|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150536|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150684|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150731|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150783|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150788|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151140|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151191|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151206|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151308|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151389|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151410|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151414|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151476|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151502|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151954|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151971|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152065|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152239|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152241|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152644|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152664|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152701|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152895|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152934|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153003|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153024|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153232|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153234|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153318|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153324|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153453|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153556|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153062|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr6_-_39507593_39507744	3.63537	FOX{D1,D2}.p2	AK160784|Dennd2a|209773|DENN/MADD domain containing 2A	AK167298|Dennd2a|209773|DENN/MADD domain containing 2A	AK165202|Dennd2a|209773|DENN/MADD domain containing 2A	BC056367|Dennd2a|209773|DENN/MADD domain containing 2A	BC057310|Dennd2a|209773|DENN/MADD domain containing 2A	AK047138|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr2_-_127555628_127555667	3.61886	FOX{D1,D2}.p2	AK078971|Mall|228576|mal, T-cell differentiation protein-like	AK163867|Mall|228576|mal, T-cell differentiation protein-like	NM_145532|Mall|228576|mal, T-cell differentiation protein-like	BC012256|Mall|228576|mal, T-cell differentiation protein-like
mm9_v1_chr8_+_89175467_89175467	3.61262	FOX{D1,D2}.p2	AK075719|Lonp2|66887|lon peptidase 2, peroxisomal	NM_001168591|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr16_+_94906703_94906712	3.61199	FOX{D1,D2}.p2	BC048837|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr11_-_101087730_101087737	3.60001	FOX{D1,D2}.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chrX_+_93651684_93651766	3.59534	FOX{D1,D2}.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr14_-_71166340_71166465	3.58464	FOX{D1,D2}.p2	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chr19_-_9162377_9162448	3.56604	FOX{D1,D2}.p2	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr19_+_36422888_36423026	3.55018	FOX{D1,D2}.p2	AK002387|Pcgf5|76073|polycomb group ring finger 5	AK080025|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr6_+_116600624_116600775	3.54147	FOX{D1,D2}.p2	AK078806|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AK087284|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_001166580|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_145980|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC031533|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC022212|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC058515|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AB024924|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene
mm9_v1_chr10_-_88996314_88996370	3.53762	FOX{D1,D2}.p2	U09417|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163504|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr2_+_34631709_34631818	3.53521	FOX{D1,D2}.p2	AK208906|Hspa5|14828|heat shock protein 5
mm9_v1_chr13_-_104554635_104554661	3.53502	FOX{D1,D2}.p2	AK081447|Srsf12|218543|serine/arginine-rich splicing factor 12	AK037115|Srsf12|218543|serine/arginine-rich splicing factor 12	AK033354|Srsf12|218543|serine/arginine-rich splicing factor 12	NM_172592|Srsf12|218543|serine/arginine-rich splicing factor 12
mm9_v1_chr18_+_75527015_75527182	3.53384	FOX{D1,D2}.p2	NM_001042660|Smad7|17131|MAD homolog 7 (Drosophila)	AK013237|Smad7|17131|MAD homolog 7 (Drosophila)	AJ000550|Smad7|17131|MAD homolog 7 (Drosophila)
mm9_v1_chr6_-_119305193_119305208	3.53292	FOX{D1,D2}.p2	BC030936|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr12_-_105011795_105011804	3.50299	FOX{D1,D2}.p2	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr4_-_118162385_118162453	3.49564	FOX{D1,D2}.p2	AK052413|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK051512|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_011587|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr7_+_28856254_28856254	3.49429	FOX{D1,D2}.p2	AK077773|Fcgbp|215384|Fc fragment of IgG binding protein	NM_001122603|Fcgbp|215384|Fc fragment of IgG binding protein
mm9_v1_chrX_-_9694712_9694834	3.47952	FOX{D1,D2}.p2	AB028049|Srpx|51795|sushi-repeat-containing protein	AB028050|Srpx|51795|sushi-repeat-containing protein	BC022572|Srpx|51795|sushi-repeat-containing protein	AK034696|Srpx|51795|sushi-repeat-containing protein	NM_016911|Srpx|51795|sushi-repeat-containing protein	BC027630|Srpx|51795|sushi-repeat-containing protein	AK159662|Srpx|51795|sushi-repeat-containing protein
mm9_v1_chr9_-_44550590_44550598	3.4776	FOX{D1,D2}.p2	
mm9_v1_chr16_-_38433223_38433224	3.47046	FOX{D1,D2}.p2	BC030670|Pla1a|85031|phospholipase A1 member A	AF063498|Pla1a|85031|phospholipase A1 member A	NM_134102|Pla1a|85031|phospholipase A1 member A
mm9_v1_chr19_+_9026020_9026327	3.46585	FOX{D1,D2}.p2	AK199642|Mta2|23942|metastasis-associated gene family, member 2	AK219174|Mta2|23942|metastasis-associated gene family, member 2	AK195366|Mta2|23942|metastasis-associated gene family, member 2	AK209683|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr12_-_105143108_105143185	3.46556	FOX{D1,D2}.p2	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr8_-_42127242_42127289	3.46062	FOX{D1,D2}.p2	AK030510|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005865|Mtus1|102103|mitochondrial tumor suppressor 1	AY626781|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr14_-_9091528_9091534	3.45902	FOX{D1,D2}.p2	NM_053115|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr6_-_72382995_72383001	3.45411	FOX{D1,D2}.p2	
mm9_v1_chr13_+_4190423_4190467	3.44629	FOX{D1,D2}.p2	AK008949|Akr1c13|27384|aldo-keto reductase family 1, member C13	NM_013778|Akr1c13|27384|aldo-keto reductase family 1, member C13	BC021937|Akr1c13|27384|aldo-keto reductase family 1, member C13	AK220165|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB027125|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB097219|Akr1c13|27384|aldo-keto reductase family 1, member C13
mm9_v1_chr13_-_27482665_27482714	3.41624	FOX{D1,D2}.p2	AF525155|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC100329|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC138199|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC111112|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK009863|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK005411|Prl2b1|66392|prolactin family 2, subfamily b, member 1	NM_025532|Prl2b1|66392|prolactin family 2, subfamily b, member 1
mm9_v1_chr2_-_27331122_27331221	3.41253	FOX{D1,D2}.p2	AK076472|Brd3|67382|bromodomain containing 3	AK136429|Brd3|67382|bromodomain containing 3	BC004832|Brd3|67382|bromodomain containing 3	AF269193|Brd3|67382|bromodomain containing 3	AK161164|Brd3|67382|bromodomain containing 3	AK167573|Brd3|67382|bromodomain containing 3	AK136007|Brd3|67382|bromodomain containing 3	AK160752|Brd3|67382|bromodomain containing 3	AK081471|Brd3|67382|bromodomain containing 3	AK037435|Brd3|67382|bromodomain containing 3	AK159827|Brd3|67382|bromodomain containing 3	NM_001113573|Brd3|67382|bromodomain containing 3	NM_001113574|Brd3|67382|bromodomain containing 3
mm9_v1_chr5_-_34517575_34517643	3.40009	FOX{D1,D2}.p2	
mm9_v1_chr16_-_23029154_23029175	3.399	FOX{D1,D2}.p2	NM_001102409|Kng2|385643|kininogen 2	NM_001102410|Kng2|385643|kininogen 2	NM_201375|Kng2|385643|kininogen 2
mm9_v1_chr8_+_120225866_120225892	3.39851	FOX{D1,D2}.p2	BC012682|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	X95685|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2
mm9_v1_chr13_-_61643156_61643198	3.38484	FOX{D1,D2}.p2	AY014777|Ctsm|64139|cathepsin M	AF202528|Ctsm|64139|cathepsin M	AK005550|Ctsm|64139|cathepsin M	AK005428|Ctsm|64139|cathepsin M	NM_022326|Ctsm|64139|cathepsin M
mm9_v1_chr18_+_61204953_61205094	3.38063	FOX{D1,D2}.p2	X04367|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr6_-_87285690_87285768	3.37001	FOX{D1,D2}.p2	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr2_-_84316891_84316933	3.36821	FOX{D1,D2}.p2	BC036146|Tfpi|21788|tissue factor pathway inhibitor	NM_001177319|Tfpi|21788|tissue factor pathway inhibitor	AK034752|Tfpi|21788|tissue factor pathway inhibitor	NM_001177320|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr5_-_105722663_105722755	3.36323	FOX{D1,D2}.p2	BC141364|Gbp4|17472|guanylate binding protein 4	BC147434|Gbp4|17472|guanylate binding protein 4	BC007143|Mpa2l|100702|macrophage activation 2 like	BC057969|Mpa2l|100702|macrophage activation 2 like	AK152226|Mpa2l|100702|macrophage activation 2 like	AK128993|Mpa2l|100702|macrophage activation 2 like	BC115768|Mpa2l|100702|macrophage activation 2 like	AK171913|Mpa2l|100702|macrophage activation 2 like	NM_194336|Mpa2l|100702|macrophage activation 2 like
mm9_v1_chr11_-_102226419_102226465	3.35057	FOX{D1,D2}.p2	M29379|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK010967|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK171808|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	BC053429|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AY296129|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	X02677|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	BC052419|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK172316|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158453|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK162616|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK172569|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK157833|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK165195|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK165267|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK172103|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK157861|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158243|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1
mm9_v1_chr13_+_55546643_55546728	3.33542	FOX{D1,D2}.p2	NM_001038018|Grk6|26385|G protein-coupled receptor kinase 6	NM_001112711|Grk6|26385|G protein-coupled receptor kinase 6	NM_011938|Grk6|26385|G protein-coupled receptor kinase 6	BC057206|Grk6|26385|G protein-coupled receptor kinase 6
mm9_v1_chr6_+_48794000_48794090	3.32002	FOX{D1,D2}.p2	AK180847|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr5_-_34530221_34530267	3.31323	FOX{D1,D2}.p2	U32395|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr16_-_23029075_23029128	3.31133	FOX{D1,D2}.p2	BC108934|Kng2|385643|kininogen 2	BC139720|Kng2|385643|kininogen 2	AY462056|Kng2|385643|kininogen 2	AY462057|Kng2|385643|kininogen 2	AY462059|Kng2|385643|kininogen 2	AY660572|Kng2|385643|kininogen 2
mm9_v1_chr6_-_87483228_87483252	3.30008	FOX{D1,D2}.p2	AK169897|Arhgap25|232201|Rho GTPase activating protein 25	NM_001037727|Arhgap25|232201|Rho GTPase activating protein 25	AK159598|Arhgap25|232201|Rho GTPase activating protein 25	AK159941|Arhgap25|232201|Rho GTPase activating protein 25
mm9_v1_chr19_+_7131325_7131532	3.28964	FOX{D1,D2}.p2	BC008653|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr12_-_105011807_105011857	3.28785	FOX{D1,D2}.p2	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr16_-_76288569_76288581	3.27964	FOX{D1,D2}.p2	BC062260|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chr3_+_85888818_85888835	3.27832	FOX{D1,D2}.p2	BC028254|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr14_-_9091396_9091464	3.26524	FOX{D1,D2}.p2	AK144243|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	AJ238492|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr5_+_102910569_102910573	3.26446	FOX{D1,D2}.p2	BC025502|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr14_+_75576599_75576717	3.26412	FOX{D1,D2}.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr6_+_149090037_149090167	3.26076	FOX{D1,D2}.p2	AK160463|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK029471|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC046911|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC065807|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	NM_177101|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK077292|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC048711|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK132096|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene
mm9_v1_chr10_+_51200463_51200512	3.25768	FOX{D1,D2}.p2	BC065784|Gp49a|14727|glycoprotein 49 A	AK171573|Gp49a|14727|glycoprotein 49 A	AK170836|Gp49a|14727|glycoprotein 49 A	AK170384|Gp49a|14727|glycoprotein 49 A	AK171133|Gp49a|14727|glycoprotein 49 A	AK171229|Gp49a|14727|glycoprotein 49 A	AK155817|Gp49a|14727|glycoprotein 49 A	AK089366|Gp49a|14727|glycoprotein 49 A	M65027|Gp49a|14727|glycoprotein 49 A	NM_008147|Gp49a|14727|glycoprotein 49 A	AK167751|Gp49a|14727|glycoprotein 49 A	AK155580|Gp49a|14727|glycoprotein 49 A	AK155788|Gp49a|14727|glycoprotein 49 A
mm9_v1_chr4_-_73596693_73596749	3.23913	FOX{D1,D2}.p2	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chrX_+_136335346_136335366	3.21968	FOX{D1,D2}.p2	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr6_+_112409498_112409498	3.19462	FOX{D1,D2}.p2	BC024383|Cav3|12391|caveolin 3	NM_007617|Cav3|12391|caveolin 3
mm9_v1_chr6_+_83293435_83293444	3.19265	FOX{D1,D2}.p2	AK196174|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr13_-_61037960_61037985	3.18518	FOX{D1,D2}.p2	NM_007796|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr10_+_101621712_101621712	3.15865	FOX{D1,D2}.p2	AK032009|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_001162369|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr11_+_118295166_118295166	3.15757	FOX{D1,D2}.p2	AF192499|C1qtnf1|56745|C1q and tumor necrosis factor related protein 1	NM_019959|C1qtnf1|56745|C1q and tumor necrosis factor related protein 1
mm9_v1_chr12_-_27141171_27141175	3.10473	FOX{D1,D2}.p2	AK153435|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr3_-_82853711_82853734	3.10454	FOX{D1,D2}.p2	BC031715|Fgb|110135|fibrinogen beta chain	NM_181849|Fgb|110135|fibrinogen beta chain	AK168626|Fgb|110135|fibrinogen beta chain	AK011920|Fgb|110135|fibrinogen beta chain	AK011118|Fgb|110135|fibrinogen beta chain	AK146960|Fgb|110135|fibrinogen beta chain
mm9_v1_chr10_-_26093761_26093964	3.09618	FOX{D1,D2}.p2	BC085192|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr11_-_100749131_100749140	3.0819	FOX{D1,D2}.p2	AK004083|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr18_+_21103125_21103125	3.07134	FOX{D1,D2}.p2	AK050395|Rnf125|67664|ring finger protein 125	NM_026301|Rnf125|67664|ring finger protein 125
mm9_v1_chr8_+_46970814_46970842	3.06488	FOX{D1,D2}.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr10_-_4752710_4752812	3.05916	FOX{D1,D2}.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr8_+_126868529_126868828	3.04414	FOX{D1,D2}.p2	BC025877|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	BC039641|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK200523|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm9_v1_chr13_-_35118959_35118964	3.04372	FOX{D1,D2}.p2	
mm9_v1_chr13_-_104710374_104710739	3.03901	FOX{D1,D2}.p2	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr15_-_58046380_58046399	3.03845	FOX{D1,D2}.p2	BC027211|Fbxo32|67731|F-box protein 32	AK014612|Fbxo32|67731|F-box protein 32
mm9_v1_chr14_-_70607443_70607553	3.03685	FOX{D1,D2}.p2	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr11_+_89892027_89892040	3.02075	FOX{D1,D2}.p2	AK003574|Tmem100|67888|transmembrane protein 100	AK033406|Tmem100|67888|transmembrane protein 100
mm9_v1_chr2_-_125142715_125142753	3.01513	FOX{D1,D2}.p2	AK137018|Fbn1|14118|fibrillin 1
mm9_v1_chr12_+_73862177_73862301	3.01139	FOX{D1,D2}.p2	NM_008910|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform	AK076054|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chrX_+_20374922_20374939	3.00103	FOX{D1,D2}.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr8_+_90806890_90806890	2.99241	FOX{D1,D2}.p2	AK155646|Adcy7|11513|adenylate cyclase 7	NM_001109756|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr15_-_51823257_51823330	2.99131	FOX{D1,D2}.p2	AK145591|Rad21|19357|RAD21 homolog (S. pombe)	AK168718|Rad21|19357|RAD21 homolog (S. pombe)	NM_009009|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr16_-_88563379_88563403	2.9907	FOX{D1,D2}.p2	BC003868|Cldn8|54420|claudin 8
mm9_v1_chr16_-_23029138_23029145	2.98364	FOX{D1,D2}.p2	BC108335|Kng2|385643|kininogen 2
mm9_v1_chr4_-_86314560_86314608	2.98119	FOX{D1,D2}.p2	AK179029|Plin2|11520|perilipin 2	AY035850|Plin2|11520|perilipin 2	AY035851|Plin2|11520|perilipin 2
mm9_v1_chr6_-_48720814_48720859	2.96903	FOX{D1,D2}.p2	BC028427|Gimap3|83408|GTPase, IMAP family member 3	BC062246|Gimap3|83408|GTPase, IMAP family member 3	BC094914|Gimap3|83408|GTPase, IMAP family member 3	BC037362|Gimap3|83408|GTPase, IMAP family member 3	AB164418|Gimap3|83408|GTPase, IMAP family member 3	AF337052|Gimap3|83408|GTPase, IMAP family member 3	NM_031247|Gimap3|83408|GTPase, IMAP family member 3
mm9_v1_chr11_+_105042843_105042862	2.96241	FOX{D1,D2}.p2	AK165667|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_001112705|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_011903|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr12_-_29308124_29308156	2.95127	FOX{D1,D2}.p2	BC104380|Colec11|71693|collectin sub-family member 11	BC104381|Colec11|71693|collectin sub-family member 11	AK003121|Colec11|71693|collectin sub-family member 11	NM_027866|Colec11|71693|collectin sub-family member 11
mm9_v1_chr8_-_3279545_3279616	2.94657	FOX{D1,D2}.p2	AK052187|Insr|16337|insulin receptor	NM_010568|Insr|16337|insulin receptor
mm9_v1_chr16_+_20692792_20692908	2.94431	FOX{D1,D2}.p2	
mm9_v1_chr7_-_149246757_149246816	2.92824	FOX{D1,D2}.p2	AK158674|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr2_+_34729973_34730037	2.9025	FOX{D1,D2}.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr3_+_96329090_96329142	2.89187	FOX{D1,D2}.p2	AJ557515|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	BC022603|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	NM_027126|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	AK014082|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)
mm9_v1_chr9_+_35259660_35259661	2.87761	FOX{D1,D2}.p2	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chr11_+_89891661_89891661	2.8739	FOX{D1,D2}.p2	AK007878|Tmem100|67888|transmembrane protein 100	NM_026433|Tmem100|67888|transmembrane protein 100
mm9_v1_chr2_+_129626252_129626487	2.87361	FOX{D1,D2}.p2	NM_001038635|Stk35|67333|serine/threonine kinase 35	NM_183262|Stk35|67333|serine/threonine kinase 35	BC138904|Stk35|67333|serine/threonine kinase 35	BC138905|Stk35|67333|serine/threonine kinase 35	AK165988|Stk35|67333|serine/threonine kinase 35	AK006778|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr11_+_101443690_101443814	2.85817	FOX{D1,D2}.p2	BC022145|Tmem106a|217203|transmembrane protein 106A
mm9_v1_chr15_-_12479631_12479703	2.85521	FOX{D1,D2}.p2	AK021207|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr10_+_87323855_87324094	2.84955	FOX{D1,D2}.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr18_-_60908267_60908331	2.83972	FOX{D1,D2}.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr3_+_84470230_84470299	2.8191	FOX{D1,D2}.p2	BC096432|Tmem154|320782|transmembrane protein 154	AK170385|Tmem154|320782|transmembrane protein 154	AK170665|Tmem154|320782|transmembrane protein 154	AK170626|Tmem154|320782|transmembrane protein 154
mm9_v1_chr2_-_172765592_172765841	2.8141	FOX{D1,D2}.p2	AK020411|Bmp7|12162|bone morphogenetic protein 7	X56906|Bmp7|12162|bone morphogenetic protein 7	BC010771|Bmp7|12162|bone morphogenetic protein 7	NM_007557|Bmp7|12162|bone morphogenetic protein 7
mm9_v1_chr9_-_115152895_115153139	2.80803	FOX{D1,D2}.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr11_-_99520272_99520272	2.80516	FOX{D1,D2}.p2	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chr11_+_101443529_101443628	2.78422	FOX{D1,D2}.p2	AK146019|Tmem106a|217203|transmembrane protein 106A	NM_144830|Tmem106a|217203|transmembrane protein 106A	AK154217|Tmem106a|217203|transmembrane protein 106A	AK150285|Tmem106a|217203|transmembrane protein 106A	AK152741|Tmem106a|217203|transmembrane protein 106A	AK151842|Tmem106a|217203|transmembrane protein 106A	BC033268|Tmem106a|217203|transmembrane protein 106A	AK170900|Tmem106a|217203|transmembrane protein 106A	AK172282|Tmem106a|217203|transmembrane protein 106A	AK149650|Tmem106a|217203|transmembrane protein 106A	AK168437|Tmem106a|217203|transmembrane protein 106A	AK169081|Tmem106a|217203|transmembrane protein 106A
mm9_v1_chr3_+_146260100_146260160	2.77839	FOX{D1,D2}.p2	AK050425|Uox|22262|urate oxidase	NM_009474|Uox|22262|urate oxidase	BC019771|Uox|22262|urate oxidase	M27695|Uox|22262|urate oxidase
mm9_v1_chr11_-_52095745_52095751	2.77796	FOX{D1,D2}.p2	BC138596|Tcf7|21414|transcription factor 7, T-cell specific	BC145343|Tcf7|21414|transcription factor 7, T-cell specific	AK037616|Tcf7|21414|transcription factor 7, T-cell specific	NM_009331|Tcf7|21414|transcription factor 7, T-cell specific
mm9_v1_chr19_+_12770279_12770282	2.77094	FOX{D1,D2}.p2	NM_029550|Keg1|64697|kidney expressed gene 1	AK002360|Keg1|64697|kidney expressed gene 1	AK165349|Keg1|64697|kidney expressed gene 1	AK165515|Keg1|64697|kidney expressed gene 1
mm9_v1_chr19_+_38470458_38470592	2.76095	FOX{D1,D2}.p2	BC137663|Tmem20|240660|transmembrane protein 20	BC137664|Tmem20|240660|transmembrane protein 20	AK041618|Tmem20|240660|transmembrane protein 20	NM_175507|Tmem20|240660|transmembrane protein 20	AK030517|Tmem20|240660|transmembrane protein 20	AK171987|Tmem20|240660|transmembrane protein 20	AK052365|Tmem20|240660|transmembrane protein 20
mm9_v1_chr6_+_53523365_53523387	2.7594	FOX{D1,D2}.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr12_+_104672380_104672501	2.75677	FOX{D1,D2}.p2	NM_026790|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	NM_194066|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	NM_194067|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	NM_194068|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	NM_194069|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AJ566111|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AJ566112|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AJ566113|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AJ566114|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AJ566115|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AK146231|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AK003665|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AK075797|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	BC125301|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	BC125636|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AK169926|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	BC128276|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1	AK187394|Ifi27l1|52668|interferon, alpha-inducible protein 27 like 1
mm9_v1_chr3_+_19869841_19869871	2.75602	FOX{D1,D2}.p2	AK160035|Cp|12870|ceruloplasmin
mm9_v1_chr10_+_57514349_57514589	2.74714	FOX{D1,D2}.p2	NM_020561|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	Y08135|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK002455|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK152282|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139288|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139289|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK151683|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A
mm9_v1_chr19_+_12770289_12770302	2.73521	FOX{D1,D2}.p2	BC010803|Keg1|64697|kidney expressed gene 1	AK165462|Keg1|64697|kidney expressed gene 1	AB028071|Keg1|64697|kidney expressed gene 1
mm9_v1_chr2_-_25089722_25089726	2.72275	FOX{D1,D2}.p2	AB054999|Slc34a3|142681|solute carrier family 34 (sodium phosphate), member 3	NM_080854|Slc34a3|142681|solute carrier family 34 (sodium phosphate), member 3
mm9_v1_chr10_-_94877824_94877916	2.72235	FOX{D1,D2}.p2	U88327|Socs2|216233|suppressor of cytokine signaling 2	NM_001168657|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr15_-_102062331_102062365	2.71648	FOX{D1,D2}.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr6_+_14851348_14851478	2.71018	FOX{D1,D2}.p2	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr13_+_55546808_55546869	2.70491	FOX{D1,D2}.p2	AK146119|Grk6|26385|G protein-coupled receptor kinase 6	AF040747|Grk6|26385|G protein-coupled receptor kinase 6	AF040748|Grk6|26385|G protein-coupled receptor kinase 6	AF040749|Grk6|26385|G protein-coupled receptor kinase 6	BC075719|Grk6|26385|G protein-coupled receptor kinase 6	Y15798|Grk6|26385|G protein-coupled receptor kinase 6	Y15799|Grk6|26385|G protein-coupled receptor kinase 6	Y15797|Grk6|26385|G protein-coupled receptor kinase 6	Y15800|Grk6|26385|G protein-coupled receptor kinase 6
mm9_v1_chr10_+_51210768_51210823	2.68918	FOX{D1,D2}.p2	AK089372|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK155750|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK089334|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170615|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	NM_013532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC006591|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05264|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05266|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC099532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170368|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4
mm9_v1_chr13_+_33096472_33096539	2.68152	FOX{D1,D2}.p2	AK035624|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9	BC029900|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9	AK087785|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9	U96700|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9
mm9_v1_chr5_+_116010796_116010949	2.67518	FOX{D1,D2}.p2	BC030189|Rplp0|11837|ribosomal protein, large, P0	AK193996|Rplp0|11837|ribosomal protein, large, P0	AK205179|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr10_+_5958432_5958574	2.66625	FOX{D1,D2}.p2	AK132308|Zbtb2|381990|zinc finger and BTB domain containing 2	NM_001033466|Zbtb2|381990|zinc finger and BTB domain containing 2
mm9_v1_chr3_+_125106995_125107008	2.66464	FOX{D1,D2}.p2	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr7_+_117365214_117365324	2.66056	FOX{D1,D2}.p2	NM_009302|Swap70|20947|SWA-70 protein	AK146773|Swap70|20947|SWA-70 protein	AK045295|Swap70|20947|SWA-70 protein	AK041505|Swap70|20947|SWA-70 protein	AK019882|Swap70|20947|SWA-70 protein	BC065136|Swap70|20947|SWA-70 protein	AK172990|Swap70|20947|SWA-70 protein	AF053974|Swap70|20947|SWA-70 protein
mm9_v1_chr9_+_5308846_5308883	2.64795	FOX{D1,D2}.p2	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr15_-_5058532_5058532	2.64661	FOX{D1,D2}.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr19_-_34953810_34953944	2.64354	FOX{D1,D2}.p2	AK017345|Pank1|75735|pantothenate kinase 1	AF347700|Pank1|75735|pantothenate kinase 1	NM_001114339|Pank1|75735|pantothenate kinase 1
mm9_v1_chr7_+_111392968_111392986	2.63242	FOX{D1,D2}.p2	NM_030684|Trim34a|94094|tripartite motif-containing 34A	AK089187|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chr11_-_46202942_46203016	2.63212	FOX{D1,D2}.p2	BC128374|Itk|16428|IL2-inducible T-cell kinase	BC128375|Itk|16428|IL2-inducible T-cell kinase	D14042|Itk|16428|IL2-inducible T-cell kinase	BC028478|Itk|16428|IL2-inducible T-cell kinase	AK020772|Itk|16428|IL2-inducible T-cell kinase	AK079693|Itk|16428|IL2-inducible T-cell kinase	AK153613|Itk|16428|IL2-inducible T-cell kinase	AK153692|Itk|16428|IL2-inducible T-cell kinase	L05631|Itk|16428|IL2-inducible T-cell kinase	L10628|Itk|16428|IL2-inducible T-cell kinase	AK083380|Itk|16428|IL2-inducible T-cell kinase	L00619|Itk|16428|IL2-inducible T-cell kinase	NM_010583|Itk|16428|IL2-inducible T-cell kinase
mm9_v1_chr4_+_97248556_97248685	2.62482	FOX{D1,D2}.p2	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chr15_+_101974978_101975063	2.61735	FOX{D1,D2}.p2	CT010184|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr10_+_79578529_79578555	2.61051	FOX{D1,D2}.p2	AK171909|Stk11|20869|serine/threonine kinase 11	AK172385|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr15_-_60656465_60656634	2.607	FOX{D1,D2}.p2	AK139928|Fam84b|399603|family with sequence similarity 84, member B	NM_001162926|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr16_-_4559511_4559853	2.60054	FOX{D1,D2}.p2	AK053091|Tcfap4|83383|transcription factor AP4	BC054777|Tcfap4|83383|transcription factor AP4	BC047270|Tcfap4|83383|transcription factor AP4	AF161262|Tcfap4|83383|transcription factor AP4	NM_031182|Tcfap4|83383|transcription factor AP4	AK166424|Tcfap4|83383|transcription factor AP4
mm9_v1_chr7_-_91763744_91763768	2.5919	FOX{D1,D2}.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr8_-_8666771_8666782	2.5898	FOX{D1,D2}.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr11_+_107409241_107409273	2.57573	FOX{D1,D2}.p2	AB093209|Helz|78455|helicase with zinc finger domain	BC076626|Helz|78455|helicase with zinc finger domain	NM_198298|Helz|78455|helicase with zinc finger domain
mm9_v1_chr4_-_128483355_128483429	2.56961	FOX{D1,D2}.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr10_+_38685309_38685399	2.55771	FOX{D1,D2}.p2	AK053234|Lama4|16775|laminin, alpha 4	NM_010681|Lama4|16775|laminin, alpha 4	AK031189|Lama4|16775|laminin, alpha 4	AK087015|Lama4|16775|laminin, alpha 4	AK164903|Lama4|16775|laminin, alpha 4	U69176|Lama4|16775|laminin, alpha 4
mm9_v1_chr6_+_34362333_34362371	2.55234	FOX{D1,D2}.p2	AK147775|Akr1b7|11997|aldo-keto reductase family 1, member B7	NM_009731|Akr1b7|11997|aldo-keto reductase family 1, member B7	AK002705|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr14_+_119380708_119380718	2.55057	FOX{D1,D2}.p2	
mm9_v1_chr5_-_77836974_77837014	2.54757	FOX{D1,D2}.p2	BC047202|Igfbp7|29817|insulin-like growth factor binding protein 7
mm9_v1_chr9_-_107612238_107612349	2.53503	FOX{D1,D2}.p2	AK140340|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm9_v1_chr5_+_148242018_148242155	2.5323	FOX{D1,D2}.p2	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr3_+_103636523_103636782	2.51895	FOX{D1,D2}.p2	AF014453|Bcl2l15|229672|BCLl2-like 15	BC117780|Bcl2l15|229672|BCLl2-like 15	BC117781|Bcl2l15|229672|BCLl2-like 15	BC128505|Bcl2l15|229672|BCLl2-like 15	BC128506|Bcl2l15|229672|BCLl2-like 15	NM_001142959|Bcl2l15|229672|BCLl2-like 15	NM_001142960|Bcl2l15|229672|BCLl2-like 15	BC052523|Bcl2l15|229672|BCLl2-like 15	BC027668|Bcl2l15|229672|BCLl2-like 15
mm9_v1_chr16_-_35871459_35871582	2.51844	FOX{D1,D2}.p2	AK005563|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK089685|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156483|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156593|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	NM_001039530|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC138874|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC145452|Parp14|547253|poly (ADP-ribose) polymerase family, member 14
mm9_v1_chr16_+_25802001_25802145	2.50999	FOX{D1,D2}.p2	AK048623|Trp63|22061|transformation related protein 63	BC092537|Trp63|22061|transformation related protein 63	NM_001127262|Trp63|22061|transformation related protein 63	NM_001127263|Trp63|22061|transformation related protein 63	NM_001127264|Trp63|22061|transformation related protein 63	NM_001127265|Trp63|22061|transformation related protein 63	NM_011641|Trp63|22061|transformation related protein 63	AK137253|Trp63|22061|transformation related protein 63	BC090649|Trp63|22061|transformation related protein 63	AB010152|Trp63|22061|transformation related protein 63	AF075437|Trp63|22061|transformation related protein 63	AF075438|Trp63|22061|transformation related protein 63	AF075439|Trp63|22061|transformation related protein 63
mm9_v1_chr15_-_51823107_51823255	2.50781	FOX{D1,D2}.p2	AK004746|Rad21|19357|RAD21 homolog (S. pombe)	AK128984|Rad21|19357|RAD21 homolog (S. pombe)	AK168896|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr9_-_58097569_58097598	2.50469	FOX{D1,D2}.p2	AK052305|Pml|18854|promyelocytic leukemia	AK054135|Pml|18854|promyelocytic leukemia	AK028044|Pml|18854|promyelocytic leukemia	NM_008884|Pml|18854|promyelocytic leukemia	NM_178087|Pml|18854|promyelocytic leukemia
mm9_v1_chr2_+_139319874_139319888	2.49725	FOX{D1,D2}.p2	AK048374|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	BC094496|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr13_-_60965746_60965777	2.4958	FOX{D1,D2}.p2	AK015635|4930486L24Rik|214639|RIKEN cDNA 4930486L24 gene	BC061218|4930486L24Rik|214639|RIKEN cDNA 4930486L24 gene	AY146988|4930486L24Rik|214639|RIKEN cDNA 4930486L24 gene	NM_178098|4930486L24Rik|214639|RIKEN cDNA 4930486L24 gene	AK145933|4930486L24Rik|214639|RIKEN cDNA 4930486L24 gene
mm9_v1_chr7_+_120350963_120350978	2.49437	FOX{D1,D2}.p2	AK146628|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AK147145|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	NM_007489|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like
mm9_v1_chr7_+_119253816_119253899	2.48963	FOX{D1,D2}.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr13_-_94269762_94269770	2.47816	FOX{D1,D2}.p2	AK141957|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr3_-_130432210_130432221	2.47804	FOX{D1,D2}.p2	BC028517|Rpl34|68436|ribosomal protein L34	BC082285|Rpl34-ps1|619547|ribosomal protein L34, pseudogene 1	NM_001005859|Rpl34|68436|ribosomal protein L34
mm9_v1_chr15_+_102797295_102797295	2.47357	FOX{D1,D2}.p2	AK033186|Hoxc10|209448|homeobox C10	NM_010462|Hoxc10|209448|homeobox C10
mm9_v1_chr2_+_34631438_34631582	2.47041	FOX{D1,D2}.p2	AK218616|Hspa5|14828|heat shock protein 5	AK186478|Hspa5|14828|heat shock protein 5	AK192310|Hspa5|14828|heat shock protein 5
mm9_v1_chr7_-_29678773_29678890	2.45518	FOX{D1,D2}.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr5_-_34517234_34517339	2.45337	FOX{D1,D2}.p2	AK013062|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr2_-_155999858_155999931	2.43634	FOX{D1,D2}.p2	BC082607|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr16_-_46120221_46120363	2.43509	FOX{D1,D2}.p2	AY029156|Cd96|84544|CD96 antigen	AK040329|Cd96|84544|CD96 antigen	BC052865|Cd96|84544|CD96 antigen	AK154076|Cd96|84544|CD96 antigen	AK156470|Cd96|84544|CD96 antigen	NM_032465|Cd96|84544|CD96 antigen	AK040539|Cd96|84544|CD96 antigen
mm9_v1_chrX_-_7770637_7770637	2.43046	FOX{D1,D2}.p2	BC004703|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	NM_007898|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm9_v1_chr5_-_105668551_105668551	2.42366	FOX{D1,D2}.p2	BC112328|Gbp10|626578|guanylate-binding protein 10	BC114209|Gbp10|626578|guanylate-binding protein 10	DQ985743|Gbp10|626578|guanylate-binding protein 10	NM_001039646|Gbp10|626578|guanylate-binding protein 10
mm9_v1_chr4_-_143998305_143998366	2.42268	FOX{D1,D2}.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr1_-_182160174_182160194	2.41937	FOX{D1,D2}.p2	U57325|Psen2|19165|presenilin 2
mm9_v1_chr14_+_32454236_32454303	2.41822	FOX{D1,D2}.p2	NM_025295|Btd|26363|biotinidase	AK005506|Btd|26363|biotinidase	AK135375|Btd|26363|biotinidase	BC024051|Btd|26363|biotinidase
mm9_v1_chr11_-_6328316_6328333	2.41583	FOX{D1,D2}.p2	
mm9_v1_chr15_+_78778153_78778153	2.41123	FOX{D1,D2}.p2	DQ228000|Triobp|110253|TRIO and F-actin binding protein	DQ228001|Triobp|110253|TRIO and F-actin binding protein	DQ228002|Triobp|110253|TRIO and F-actin binding protein	NM_001039155|Triobp|110253|TRIO and F-actin binding protein	NM_001039156|Triobp|110253|TRIO and F-actin binding protein	NM_138579|Triobp|110253|TRIO and F-actin binding protein
mm9_v1_chr16_+_17406078_17406185	2.40912	FOX{D1,D2}.p2	NM_023348|Snap29|67474|synaptosomal-associated protein 29	AY008722|Snap29|67474|synaptosomal-associated protein 29	AK007065|Snap29|67474|synaptosomal-associated protein 29	AK039203|Snap29|67474|synaptosomal-associated protein 29	AK005042|Snap29|67474|synaptosomal-associated protein 29	BC030066|Snap29|67474|synaptosomal-associated protein 29	AK147845|Snap29|67474|synaptosomal-associated protein 29
mm9_v1_chr1_-_172040621_172040689	2.40485	FOX{D1,D2}.p2	BC138826|Ddr2|18214|discoidin domain receptor family, member 2	BC138827|Ddr2|18214|discoidin domain receptor family, member 2	X76505|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr13_+_119503505_119503505	2.40396	FOX{D1,D2}.p2	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr8_+_46970860_46970893	2.40369	FOX{D1,D2}.p2	AK016447|Pdlim3|53318|PDZ and LIM domain 3	BC070418|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr1_+_40281924_40282018	2.39005	FOX{D1,D2}.p2	M20658|Il1r1|16177|interleukin 1 receptor, type I	NM_008362|Il1r1|16177|interleukin 1 receptor, type I	BC109135|Il1r1|16177|interleukin 1 receptor, type I
mm9_v1_chr10_+_126415973_126416035	2.38893	FOX{D1,D2}.p2	AK049271|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	AK170287|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	AK045068|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr18_+_80315134_80315153	2.38035	FOX{D1,D2}.p2	AK010699|Pard6g|93737|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm9_v1_chr5_+_104728299_104728323	2.37416	FOX{D1,D2}.p2	NM_008318|Ibsp|15891|integrin binding sialoprotein	AK132371|Ibsp|15891|integrin binding sialoprotein	L23801|Ibsp|15891|integrin binding sialoprotein	BC045143|Ibsp|15891|integrin binding sialoprotein	AK162640|Ibsp|15891|integrin binding sialoprotein	L20232|Ibsp|15891|integrin binding sialoprotein
mm9_v1_chr1_-_69732373_69732533	2.37259	FOX{D1,D2}.p2	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chrX_-_71470766_71470914	2.36738	FOX{D1,D2}.p2	BC099506|Flna|192176|filamin, alpha
mm9_v1_chr2_-_60511707_60511810	2.35967	FOX{D1,D2}.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr2_+_152106052_152106158	2.34673	FOX{D1,D2}.p2	AK042898|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr19_-_60842585_60842735	2.34358	FOX{D1,D2}.p2	BC169258|Eif3a|13669|eukaryotic translation initiation factor 3, subunit A
mm9_v1_chr10_+_127303528_127303611	2.34037	FOX{D1,D2}.p2	AY053572|BC089597|216454|cDNA sequence BC089597	NM_145424|BC089597|216454|cDNA sequence BC089597	AK144071|BC089597|216454|cDNA sequence BC089597	BC018263|BC089597|216454|cDNA sequence BC089597	BC089597|BC089597|216454|cDNA sequence BC089597	AY053571|BC089597|216454|cDNA sequence BC089597
mm9_v1_chr6_+_34362388_34362389	2.33016	FOX{D1,D2}.p2	BC086929|Akr1b7|11997|aldo-keto reductase family 1, member B7	J05663|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr15_-_102008126_102008145	2.3268	FOX{D1,D2}.p2	
mm9_v1_chr18_-_39646734_39646900	2.3262	FOX{D1,D2}.p2	AK037733|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	DQ504162|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	HM236293|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13358|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13359|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	NM_008173|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129912|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129913|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X04435|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr1_-_99873795_99873812	2.3235	FOX{D1,D2}.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr1_+_36568707_36568722	2.32264	FOX{D1,D2}.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr13_+_33096402_33096415	2.31482	FOX{D1,D2}.p2	AK161581|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9	NM_009256|Serpinb9|20723|serine (or cysteine) peptidase inhibitor, clade B, member 9
mm9_v1_chr4_-_57928618_57928638	2.3104	FOX{D1,D2}.p2	AK033446|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr18_-_39649411_39649429	2.30815	FOX{D1,D2}.p2	BC008154|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chrX_+_67639051_67639142	2.30803	FOX{D1,D2}.p2	AK169935|1110012L19Rik|68618|RIKEN cDNA 1110012L19 gene	AK003642|1110012L19Rik|68618|RIKEN cDNA 1110012L19 gene	NM_026787|1110012L19Rik|68618|RIKEN cDNA 1110012L19 gene	BC024574|1110012L19Rik|68618|RIKEN cDNA 1110012L19 gene
mm9_v1_chr15_+_101974792_101974939	2.30683	FOX{D1,D2}.p2	X81584|Igfbp6|16012|insulin-like growth factor binding protein 6	BC012723|Igfbp6|16012|insulin-like growth factor binding protein 6	AK157982|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr11_-_115971521_115971577	2.30406	FOX{D1,D2}.p2	AK031572|Trim47|217333|tripartite motif-containing 47	BC100317|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr2_+_26828935_26829056	2.29966	FOX{D1,D2}.p2	AB071302|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	NM_001001322|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AK157459|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AB112362|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	EU034706|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm9_v1_chr11_+_101229029_101229043	2.28328	FOX{D1,D2}.p2	AK050279|G6pc|14377|glucose-6-phosphatase, catalytic	AK052656|G6pc|14377|glucose-6-phosphatase, catalytic	U00445|G6pc|14377|glucose-6-phosphatase, catalytic	BC013448|G6pc|14377|glucose-6-phosphatase, catalytic	NM_008061|G6pc|14377|glucose-6-phosphatase, catalytic
mm9_v1_chr4_+_150302107_150302108	2.28082	FOX{D1,D2}.p2	NM_001077509|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK154625|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr2_+_24831548_24831624	2.27327	FOX{D1,D2}.p2	NM_146251|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK148380|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK088362|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK170417|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC021312|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr2_+_24831667_24831768	2.26885	FOX{D1,D2}.p2	AK038505|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141365|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141366|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr7_-_35070627_35070627	2.26474	FOX{D1,D2}.p2	AK076994|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene	NM_172741|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr9_+_108239210_108239322	2.2629	FOX{D1,D2}.p2	AK177758|Rhoa|11848|ras homolog gene family, member A
mm9_v1_chr1_-_92866005_92866196	2.26016	FOX{D1,D2}.p2	BC013170|Rab17|19329|RAB17, member RAS oncogene family	BC051071|Rab17|19329|RAB17, member RAS oncogene family	AK075591|Rab17|19329|RAB17, member RAS oncogene family	NM_008998|Rab17|19329|RAB17, member RAS oncogene family
mm9_v1_chr15_+_54964990_54964990	2.25059	FOX{D1,D2}.p2	AK139888|Deptor|97998|DEP domain containing MTOR-interacting protein	NM_001037937|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr7_+_100023762_100023966	2.24942	FOX{D1,D2}.p2	NM_028243|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011112|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK051677|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK166282|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011816|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC089575|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK054462|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC055022|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC026424|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)
mm9_v1_chr5_-_98459943_98460087	2.2392	FOX{D1,D2}.p2	BC076595|Antxr2|71914|anthrax toxin receptor 2	NM_133738|Antxr2|71914|anthrax toxin receptor 2	AK155460|Antxr2|71914|anthrax toxin receptor 2
mm9_v1_chr8_+_28233019_28233024	2.2332	FOX{D1,D2}.p2	AK020642|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr17_-_36809141_36809141	2.22683	FOX{D1,D2}.p2	AF539594|H2-M1|224756|histocompatibility 2, M region locus 1	NM_177636|H2-M1|224756|histocompatibility 2, M region locus 1
mm9_v1_chr10_+_92951512_92951516	2.22518	FOX{D1,D2}.p2	AK014518|Hal|15109|histidine ammonia lyase	NM_010401|Hal|15109|histidine ammonia lyase	BC157999|Hal|15109|histidine ammonia lyase
mm9_v1_chr6_-_87759747_87759783	2.2182	FOX{D1,D2}.p2	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr14_+_61386970_61386985	2.21656	FOX{D1,D2}.p2	DQ002401|C1qtnf9|239126|C1q and tumor necrosis factor related protein 9	NM_183175|C1qtnf9|239126|C1q and tumor necrosis factor related protein 9	BC115632|C1qtnf9|239126|C1q and tumor necrosis factor related protein 9	BC115633|C1qtnf9|239126|C1q and tumor necrosis factor related protein 9
mm9_v1_chr13_+_27893522_27893571	2.21629	FOX{D1,D2}.p2	AB032428|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF234636|Prl2a1|56635|prolactin family 2, subfamily a, member 1	NM_019991|Prl2a1|56635|prolactin family 2, subfamily a, member 1	BC099458|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AK005424|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF226610|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF272368|Prl2a1|56635|prolactin family 2, subfamily a, member 1
mm9_v1_chr4_-_44181148_44181210	2.20627	FOX{D1,D2}.p2	AK044324|Rnf38|73469|ring finger protein 38	NM_001038993|Rnf38|73469|ring finger protein 38	AK147608|Rnf38|73469|ring finger protein 38
mm9_v1_chr19_+_7131234_7131258	2.19817	FOX{D1,D2}.p2	NM_134147|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr6_+_34659440_34659540	2.19387	FOX{D1,D2}.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr9_+_123715592_123715616	2.18952	FOX{D1,D2}.p2	AF305709|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	NM_030712|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK153914|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK052901|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AF301018|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK137703|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	BC096491|Cxcr6|80901|chemokine (C-X-C motif) receptor 6
mm9_v1_chr7_+_133920438_133920526	2.1793	FOX{D1,D2}.p2	AK003371|Ypel3|66090|yippee-like 3 (Drosophila)	NM_025347|Ypel3|66090|yippee-like 3 (Drosophila)	NM_026875|Ypel3|66090|yippee-like 3 (Drosophila)	AF523353|Ypel3|66090|yippee-like 3 (Drosophila)	AK002925|Ypel3|66090|yippee-like 3 (Drosophila)	BC009171|Ypel3|66090|yippee-like 3 (Drosophila)
mm9_v1_chr6_-_14705104_14705273	2.17776	FOX{D1,D2}.p2	AK084719|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109007|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109008|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	AK084518|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	NM_080464|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A
mm9_v1_chr7_+_148127464_148127517	2.16991	FOX{D1,D2}.p2	AK085600|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	AK077662|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	NM_145387|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	BC056953|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr13_+_42396638_42396638	2.16378	FOX{D1,D2}.p2	NM_010104|Edn1|13614|endothelin 1
mm9_v1_chr17_+_85357623_85357715	2.16286	FOX{D1,D2}.p2	BC018556|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	D17411|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	D17412|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	D45860|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform
mm9_v1_chr6_+_70676803_70676846	2.15635	FOX{D1,D2}.p2	
mm9_v1_chr9_+_44134859_44135076	2.14704	FOX{D1,D2}.p2	BC010474|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	NM_007875|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008246|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008317|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK164129|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	X65603|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm9_v1_chr2_+_122607734_122607734	2.14563	FOX{D1,D2}.p2	AF174535|Sqrdl|59010|sulfide quinone reductase-like (yeast)	NM_021507|Sqrdl|59010|sulfide quinone reductase-like (yeast)
mm9_v1_chr1_-_157882999_157883288	2.13818	FOX{D1,D2}.p2	AK152751|Tor1aip1|208263|torsin A interacting protein 1	AK139709|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr12_+_53198729_53198769	2.13388	FOX{D1,D2}.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr9_+_75623899_75624064	2.12857	FOX{D1,D2}.p2	L41145|Bmp5|12160|bone morphogenetic protein 5	BC100751|Bmp5|12160|bone morphogenetic protein 5	BC100752|Bmp5|12160|bone morphogenetic protein 5	BC100753|Bmp5|12160|bone morphogenetic protein 5	BC100754|Bmp5|12160|bone morphogenetic protein 5	AK160412|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr11_+_105043195_105043203	2.12298	FOX{D1,D2}.p2	AK014829|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr11_+_58028487_58028540	2.11905	FOX{D1,D2}.p2	AK152870|Irgm2|54396|immunity-related GTPase family M member 2	AK153309|Irgm2|54396|immunity-related GTPase family M member 2	AK165347|Irgm2|54396|immunity-related GTPase family M member 2
mm9_v1_chr5_-_72692122_72692149	2.10454	FOX{D1,D2}.p2	AK005572|Corin|53419|corin
mm9_v1_chr12_-_105392063_105392090	2.09673	FOX{D1,D2}.p2	BC116724|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C	NM_008458|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C
mm9_v1_chr6_+_121296714_121296721	2.0818	FOX{D1,D2}.p2	NM_133661|Slc6a12|14411|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	BC019211|Slc6a12|14411|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
mm9_v1_chr1_-_181476342_181476404	2.07225	FOX{D1,D2}.p2	BC138836|Tfb2m|15278|transcription factor B2, mitochondrial	BC138837|Tfb2m|15278|transcription factor B2, mitochondrial	AK167930|Tfb2m|15278|transcription factor B2, mitochondrial	M74555|Tfb2m|15278|transcription factor B2, mitochondrial	AK090106|Tfb2m|15278|transcription factor B2, mitochondrial	AK168970|Tfb2m|15278|transcription factor B2, mitochondrial	AK169138|Tfb2m|15278|transcription factor B2, mitochondrial	AK166717|Tfb2m|15278|transcription factor B2, mitochondrial	AK146563|Tfb2m|15278|transcription factor B2, mitochondrial	NM_008249|Tfb2m|15278|transcription factor B2, mitochondrial
mm9_v1_chr8_+_74842931_74842964	2.06602	FOX{D1,D2}.p2	U25096|Klf2|16598|Kruppel-like factor 2 (lung)	BC138737|Klf2|16598|Kruppel-like factor 2 (lung)	BC138738|Klf2|16598|Kruppel-like factor 2 (lung)	AK131962|Klf2|16598|Kruppel-like factor 2 (lung)	NM_008452|Klf2|16598|Kruppel-like factor 2 (lung)
mm9_v1_chr6_-_71094313_71094369	2.03856	FOX{D1,D2}.p2	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr19_-_40476799_40476801	2.01973	FOX{D1,D2}.p2	NM_001034964|Sorbs1|20411|sorbin and SH3 domain containing 1	AK146712|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr16_+_22920274_22920459	2.00586	FOX{D1,D2}.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr1_-_167932735_167932770	2.00316	FOX{D1,D2}.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr5_-_77837037_77837125	2.00193	FOX{D1,D2}.p2	L75822|Igfbp7|29817|insulin-like growth factor binding protein 7	AK002277|Igfbp7|29817|insulin-like growth factor binding protein 7	AK148749|Igfbp7|29817|insulin-like growth factor binding protein 7	BC092538|Igfbp7|29817|insulin-like growth factor binding protein 7	AK156315|Igfbp7|29817|insulin-like growth factor binding protein 7	AB012886|Igfbp7|29817|insulin-like growth factor binding protein 7	NM_001159518|Igfbp7|29817|insulin-like growth factor binding protein 7	NM_008048|Igfbp7|29817|insulin-like growth factor binding protein 7
mm9_v1_chr11_-_99496366_99496397	2.00055	FOX{D1,D2}.p2	BC140967|Krtap4-2|68673|keratin associated protein 4-2	AK004055|Krtap4-2|68673|keratin associated protein 4-2	NM_026807|Krtap4-2|68673|keratin associated protein 4-2
mm9_v1_chr8_+_55635683_55635717	1.99951	FOX{D1,D2}.p2	AK003770|Asb5|76294|ankyrin repeat and SOCs box-containing 5	NM_029569|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC120851|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC132007|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr2_+_124978315_124978357	1.99803	FOX{D1,D2}.p2	AK052750|Slc12a1|20495|solute carrier family 12, member 1	AK085455|Slc12a1|20495|solute carrier family 12, member 1	AK128928|Slc12a1|20495|solute carrier family 12, member 1	NM_001079690|Slc12a1|20495|solute carrier family 12, member 1	NM_183354|Slc12a1|20495|solute carrier family 12, member 1	U20973|Slc12a1|20495|solute carrier family 12, member 1	U20974|Slc12a1|20495|solute carrier family 12, member 1	U20975|Slc12a1|20495|solute carrier family 12, member 1	BC016888|Slc12a1|20495|solute carrier family 12, member 1
mm9_v1_chr8_+_55635768_55635781	1.99317	FOX{D1,D2}.p2	BC108405|Asb5|76294|ankyrin repeat and SOCs box-containing 5	AF398966|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr8_-_95861063_95861110	1.98226	FOX{D1,D2}.p2	AK162328|Ces1g|12623|carboxylesterase 1G	BC026897|Ces1g|12623|carboxylesterase 1G	Y12887|Ces1g|12623|carboxylesterase 1G	AK136446|Ces1g|12623|carboxylesterase 1G	AK136588|Ces1g|12623|carboxylesterase 1G	AK149446|Ces1g|12623|carboxylesterase 1G	NM_021456|Ces1g|12623|carboxylesterase 1G
mm9_v1_chr1_+_40141586_40141636	1.97064	FOX{D1,D2}.p2	AK132264|Il1r2|16178|interleukin 1 receptor, type II	NM_010555|Il1r2|16178|interleukin 1 receptor, type II	X59769|Il1r2|16178|interleukin 1 receptor, type II	BC032962|Il1r2|16178|interleukin 1 receptor, type II
mm9_v1_chr5_+_122659745_122659913	1.97027	FOX{D1,D2}.p2	NM_001042489|Hvcn1|74096|hydrogen voltage-gated channel 1	AK154880|Hvcn1|74096|hydrogen voltage-gated channel 1	AK170422|Hvcn1|74096|hydrogen voltage-gated channel 1	AK155123|Hvcn1|74096|hydrogen voltage-gated channel 1	BC021548|Hvcn1|74096|hydrogen voltage-gated channel 1
mm9_v1_chr2_+_158132228_158132404	1.96679	FOX{D1,D2}.p2	AK143562|Lbp|16803|lipopolysaccharide binding protein	NM_008489|Lbp|16803|lipopolysaccharide binding protein	X99347|Lbp|16803|lipopolysaccharide binding protein	BC004795|Lbp|16803|lipopolysaccharide binding protein	AK158105|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr5_-_66543123_66543228	1.96527	FOX{D1,D2}.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr5_-_74023659_74023666	1.96489	FOX{D1,D2}.p2	BC031901|Lrrc66|231296|leucine rich repeat containing 66	NM_153568|Lrrc66|231296|leucine rich repeat containing 66	AK051875|Lrrc66|231296|leucine rich repeat containing 66
mm9_v1_chr17_+_25015186_25015209	1.96484	FOX{D1,D2}.p2	AK220290|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit
mm9_v1_chr15_+_25682945_25682960	1.94856	FOX{D1,D2}.p2	AK161653|Myo10|17909|myosin X
mm9_v1_chr6_-_52154455_52154585	1.94547	FOX{D1,D2}.p2	M36604|Hoxa5|15402|homeobox A5	X16840|Hoxa5|15402|homeobox A5	M28021|Hoxa5|15402|homeobox A5	NM_010453|Hoxa5|15402|homeobox A5
mm9_v1_chr11_+_96143218_96143218	1.94364	FOX{D1,D2}.p2	NM_010461|Hoxb8|15416|homeobox B8	X13721|Hoxb8|15416|homeobox B8
mm9_v1_chr6_+_113408477_113408477	1.92926	FOX{D1,D2}.p2	AK046302|Il17re|57890|interleukin 17 receptor E	NM_145826|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr1_+_136328081_136328132	1.92008	FOX{D1,D2}.p2	AK186237|Adipor1|72674|adiponectin receptor 1	AK204573|Adipor1|72674|adiponectin receptor 1	AK188561|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr3_-_142054771_142054814	1.90376	FOX{D1,D2}.p2	DQ177283|Pdlim5|56376|PDZ and LIM domain 5	HM369794|Pdlim5|56376|PDZ and LIM domain 5	HM369795|Pdlim5|56376|PDZ and LIM domain 5	HM369796|Pdlim5|56376|PDZ and LIM domain 5	HM369797|Pdlim5|56376|PDZ and LIM domain 5	HM369798|Pdlim5|56376|PDZ and LIM domain 5	NM_001190857|Pdlim5|56376|PDZ and LIM domain 5	NM_022554|Pdlim5|56376|PDZ and LIM domain 5	AB016587|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr17_-_31266539_31266557	1.89547	FOX{D1,D2}.p2	BC011042|Tff3|21786|trefoil factor 3, intestinal	AK008538|Tff3|21786|trefoil factor 3, intestinal	D38410|Tff3|21786|trefoil factor 3, intestinal	NM_011575|Tff3|21786|trefoil factor 3, intestinal
mm9_v1_chr1_-_30930715_30930760	1.8937	FOX{D1,D2}.p2	AK133490|Phf3|213109|PHD finger protein 3
mm9_v1_chr4_-_115168741_115168750	1.88838	FOX{D1,D2}.p2	AK098088|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	AK149392|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	AK165452|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	BC089609|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	NM_007822|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14
mm9_v1_chr8_-_46380165_46380188	1.88688	FOX{D1,D2}.p2	NM_008455|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr3_-_37131486_37131557	1.88245	FOX{D1,D2}.p2	AY428162|Il21|60505|interleukin 21	DQ645418|Il21|60505|interleukin 21	BC125414|Il21|60505|interleukin 21	BC125416|Il21|60505|interleukin 21	AF254070|Il21|60505|interleukin 21	NM_021782|Il21|60505|interleukin 21
mm9_v1_chr11_+_21138879_21139023	1.88041	FOX{D1,D2}.p2	NM_139061|Vps54|245944|vacuolar protein sorting 54 (yeast)
mm9_v1_chr5_-_149862867_149863025	1.87333	FOX{D1,D2}.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr4_-_44053229_44053254	1.86546	FOX{D1,D2}.p2	AK033507|Gne|50798|glucosamine	AK202067|Gne|50798|glucosamine
mm9_v1_chr11_+_20125239_20125296	1.84628	FOX{D1,D2}.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr13_-_4149873_4149891	1.84376	FOX{D1,D2}.p2	BC034259|Akr1c18|105349|aldo-keto reductase family 1, member C18	AB059565|Akr1c18|105349|aldo-keto reductase family 1, member C18	NM_134066|Akr1c18|105349|aldo-keto reductase family 1, member C18	AK153898|Akr1c18|105349|aldo-keto reductase family 1, member C18
mm9_v1_chr19_-_46114019_46114148	1.83294	FOX{D1,D2}.p2	NM_010697|Ldb1|16825|LIM domain binding 1	U69270|Ldb1|16825|LIM domain binding 1
mm9_v1_chr12_-_102988510_102988573	1.83232	FOX{D1,D2}.p2	AK203388|Fbln5|23876|fibulin 5	AK212054|Fbln5|23876|fibulin 5
mm9_v1_chr7_+_119167034_119167043	1.82829	FOX{D1,D2}.p2	AK041541|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chrX_+_17739762_17739792	1.82621	FOX{D1,D2}.p2	AK164941|Kdm6a|22289|4lysine (K)-specific demethylase 6A	AK144654|Kdm6a|22289|4lysine (K)-specific demethylase 6A	AK080370|Kdm6a|22289|4lysine (K)-specific demethylase 6A	BC053433|Kdm6a|22289|4lysine (K)-specific demethylase 6A	NM_009483|Kdm6a|22289|4lysine (K)-specific demethylase 6A
mm9_v1_chr1_+_159456274_159456300	1.82313	FOX{D1,D2}.p2	AK132144|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	AB063356|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	NM_001159986|Sec16b|89867|SEC16 homolog B (S. cerevisiae)
mm9_v1_chr2_+_164571458_164571553	1.81754	FOX{D1,D2}.p2	AK018299|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK145239|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168357|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168315|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	BC003486|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	NM_133763|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AB045974|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1
mm9_v1_chr11_-_101026888_101026952	1.81732	FOX{D1,D2}.p2	BC024538|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr13_+_97408920_97408964	1.81594	FOX{D1,D2}.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr16_+_57549340_57549381	1.81102	FOX{D1,D2}.p2	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr10_-_36858671_36858801	1.80808	FOX{D1,D2}.p2	BC046601|Marcks|17118|myristoylated alanine rich protein kinase C substrate	M60474|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC002068|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC039911|Marcks|17118|myristoylated alanine rich protein kinase C substrate	NM_008538|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr15_+_59480204_59480213	1.8042	FOX{D1,D2}.p2	AK033358|Trib1|211770|tribbles homolog 1 (Drosophila)	AK028626|Trib1|211770|tribbles homolog 1 (Drosophila)	AK040738|Trib1|211770|tribbles homolog 1 (Drosophila)	AK041212|Trib1|211770|tribbles homolog 1 (Drosophila)	AK162876|Trib1|211770|tribbles homolog 1 (Drosophila)	NM_144549|Trib1|211770|tribbles homolog 1 (Drosophila)
mm9_v1_chr4_-_138281162_138281179	1.7948	FOX{D1,D2}.p2	AK133185|Ubxn10|212190|UBX domain protein 10	AK161245|Ubxn10|212190|UBX domain protein 10	NM_178671|Ubxn10|212190|UBX domain protein 10	AK077656|Ubxn10|212190|UBX domain protein 10
mm9_v1_chr18_-_60432920_60432925	1.79399	FOX{D1,D2}.p2	BC150900|Gm4841|225594|predicted gene 4841	NM_001034859|Gm4841|225594|predicted gene 4841	AK156469|Gm4841|225594|predicted gene 4841
mm9_v1_chr17_-_66234064_66234193	1.79227	FOX{D1,D2}.p2	AK019116|Ralbp1|19765|ralA binding protein 1	AK159404|Ralbp1|19765|ralA binding protein 1	X80937|Ralbp1|19765|ralA binding protein 1	BC054329|Ralbp1|19765|ralA binding protein 1	BC076636|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr1_-_164828842_164828859	1.79018	FOX{D1,D2}.p2	BC031415|Fmo2|55990|flavin containing monooxygenase 2	NM_018881|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr16_-_21995441_21995614	1.78849	FOX{D1,D2}.p2	AY093499|Liph|239759|lipase, member H	AK048150|Liph|239759|lipase, member H	NM_153404|Liph|239759|lipase, member H	BC037489|Liph|239759|lipase, member H	AK161067|Liph|239759|lipase, member H	AK035498|Liph|239759|lipase, member H	AK134352|Liph|239759|lipase, member H	AK136503|Liph|239759|lipase, member H	AK162492|Liph|239759|lipase, member H	AK137278|Liph|239759|lipase, member H	NM_001083894|Liph|239759|lipase, member H
mm9_v1_chr16_+_23290588_23290591	1.77824	FOX{D1,D2}.p2	D16106|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr12_+_33987379_33987464	1.77797	FOX{D1,D2}.p2	NM_001033436|Atxn7l1|380753|ataxin 7-like 1	AK156016|Atxn7l1|380753|ataxin 7-like 1	BC147479|Atxn7l1|380753|ataxin 7-like 1	BC147483|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr16_+_43247396_43247452	1.77734	FOX{D1,D2}.p2	AK005028|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_019778|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_181058|Zbtb20|56490|zinc finger and BTB domain containing 20	BC031114|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr15_+_99223622_99223695	1.77589	FOX{D1,D2}.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr3_+_32335072_32335127	1.76469	FOX{D1,D2}.p2	BC089038|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	NM_008839|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	BC130228|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	U03279|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm9_v1_chr16_+_95939340_95939483	1.76061	FOX{D1,D2}.p2	AK038001|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	D26063|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr8_-_46380114_46380132	1.76004	FOX{D1,D2}.p2	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr11_-_65083442_65083498	1.7584	FOX{D1,D2}.p2	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr18_+_34918559_34918559	1.75773	FOX{D1,D2}.p2	BC057111|Fam53c|66306|family with sequence similarity 53, member C	NM_175104|Fam53c|66306|family with sequence similarity 53, member C
mm9_v1_chr10_+_79578561_79578596	1.75277	FOX{D1,D2}.p2	AK172528|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr4_-_151363053_151363130	1.75139	FOX{D1,D2}.p2	AK008225|Thap3|69876|THAP domain containing, apoptosis associated protein 3	AK038184|Thap3|69876|THAP domain containing, apoptosis associated protein 3	BC094395|Thap3|69876|THAP domain containing, apoptosis associated protein 3	BC059091|Thap3|69876|THAP domain containing, apoptosis associated protein 3	BC115485|Thap3|69876|THAP domain containing, apoptosis associated protein 3	BC115486|Thap3|69876|THAP domain containing, apoptosis associated protein 3	NM_001145929|Thap3|69876|THAP domain containing, apoptosis associated protein 3	NM_175152|Thap3|69876|THAP domain containing, apoptosis associated protein 3	AK050740|Thap3|69876|THAP domain containing, apoptosis associated protein 3
mm9_v1_chr7_-_150871751_150871781	1.7457	FOX{D1,D2}.p2	AJ278264|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	AY046550|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	BC106828|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	AY165625|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	BC106829|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	AK154786|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	NM_024290|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23	AK170037|Tnfrsf23|79201|tumor necrosis factor receptor superfamily, member 23
mm9_v1_chr16_-_19983049_19983121	1.74112	FOX{D1,D2}.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr6_+_54631644_54631765	1.73965	FOX{D1,D2}.p2	BC042507|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	BC052467|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019120|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019128|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK043452|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	NM_026629|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene
mm9_v1_chr5_+_102910409_102910555	1.73287	FOX{D1,D2}.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr6_-_52108249_52108315	1.72986	FOX{D1,D2}.p2	BC138097|Hoxa1|15394|homeobox A1	BC138098|Hoxa1|15394|homeobox A1	M22115|Hoxa1|15394|homeobox A1	AK143943|Hoxa1|15394|homeobox A1	AK083575|Hoxa1|15394|homeobox A1	NM_010449|Hoxa1|15394|homeobox A1
mm9_v1_chr3_+_130813214_130813388	1.72662	FOX{D1,D2}.p2	BC057543|Lef1|16842|lymphoid enhancer binding factor 1	AK131979|Lef1|16842|lymphoid enhancer binding factor 1	AK158769|Lef1|16842|lymphoid enhancer binding factor 1	NM_010703|Lef1|16842|lymphoid enhancer binding factor 1	X58636|Lef1|16842|lymphoid enhancer binding factor 1
mm9_v1_chr9_+_15309938_15309938	1.72641	FOX{D1,D2}.p2	AF197136|BC017612|170748|cDNA sequence BC017612	NM_133214|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr9_+_44206431_44206438	1.72595	FOX{D1,D2}.p2	AK003620|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF080469|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr1_+_53370483_53370609	1.72215	FOX{D1,D2}.p2	BC030671|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	BC058172|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK045669|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	NM_028091|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137332|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK011265|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137402|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1
mm9_v1_chr9_-_24913234_24913238	1.71581	FOX{D1,D2}.p2	AK208093|Herpud2|80517|HERPUD family member 2
mm9_v1_chr19_+_55816320_55816547	1.71473	FOX{D1,D2}.p2	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr5_-_87335956_87335985	1.71018	FOX{D1,D2}.p2	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr9_-_100407241_100407274	1.70011	FOX{D1,D2}.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr7_+_132695735_132695755	1.70009	FOX{D1,D2}.p2	AK034466|Il4ra|16190|interleukin 4 receptor, alpha
mm9_v1_chr8_+_81033220_81033473	1.69954	FOX{D1,D2}.p2	NM_029736|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK160402|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK079901|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152752|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152849|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK010834|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK165983|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK040517|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116666|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116717|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825926|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825927|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825928|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm9_v1_chr14_+_65977510_65977519	1.68676	FOX{D1,D2}.p2	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr2_+_155576943_155577133	1.68345	FOX{D1,D2}.p2	NM_011171|Procr|19124|protein C receptor, endothelial	AK167302|Procr|19124|protein C receptor, endothelial	X63748|Procr|19124|protein C receptor, endothelial	L39017|Procr|19124|protein C receptor, endothelial	BC028755|Procr|19124|protein C receptor, endothelial	AK136541|Procr|19124|protein C receptor, endothelial	CT010175|Procr|19124|protein C receptor, endothelial
mm9_v1_chr8_-_23272965_23272967	1.68206	FOX{D1,D2}.p2	NM_001162947|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	AF093416|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr15_-_94408654_94408675	1.68186	FOX{D1,D2}.p2	
mm9_v1_chr9_+_5345475_5345506	1.6716	FOX{D1,D2}.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr13_+_113999866_114000016	1.66692	FOX{D1,D2}.p2	BC051919|Esm1|71690|endothelial cell-specific molecule 1	NM_023612|Esm1|71690|endothelial cell-specific molecule 1	AK002913|Esm1|71690|endothelial cell-specific molecule 1	BC020038|Esm1|71690|endothelial cell-specific molecule 1	BC147648|Esm1|71690|endothelial cell-specific molecule 1	BC147650|Esm1|71690|endothelial cell-specific molecule 1	AJ249354|Esm1|71690|endothelial cell-specific molecule 1
mm9_v1_chr7_+_90780446_90780552	1.66331	FOX{D1,D2}.p2	AK077328|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK142503|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK080060|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK085852|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK009980|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	BC031733|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK158178|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	BC058226|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	NM_023377|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AY007808|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AF480302|Stard5|170460|StAR-related lipid transfer (START) domain containing 5
mm9_v1_chr6_-_134741351_134741353	1.66259	FOX{D1,D2}.p2	AK035652|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr17_-_51878720_51878731	1.65853	FOX{D1,D2}.p2	AK081385|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr13_+_9171776_9171813	1.65012	FOX{D1,D2}.p2	AK148903|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr1_-_158869650_158869756	1.64392	FOX{D1,D2}.p2	BC043132|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	BC052663|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK169368|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK018622|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029049|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK033549|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK161080|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029993|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK036803|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159965|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159967|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159968|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_023884|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr11_+_33946927_33946930	1.64066	FOX{D1,D2}.p2	AK170491|Lcp2|16822|lymphocyte cytosolic protein 2
mm9_v1_chr15_-_96291163_96291288	1.64043	FOX{D1,D2}.p2	AK129478|Scaf11|72193|SR-related CTD-associated factor 11	AK034674|Scaf11|72193|SR-related CTD-associated factor 11	BC058682|Scaf11|72193|SR-related CTD-associated factor 11	NM_028148|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr3_-_137644466_137644512	1.63958	FOX{D1,D2}.p2	AF163255|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK145745|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK146180|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AF186023|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK079794|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK169584|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	BC014759|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	NM_011932|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1
mm9_v1_chr3_+_121160714_121160815	1.63302	FOX{D1,D2}.p2	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr7_+_52590612_52590774	1.63138	FOX{D1,D2}.p2	AK017230|Hrc|15464|histidine rich calcium binding protein	NM_010473|Hrc|15464|histidine rich calcium binding protein	AF132218|Hrc|15464|histidine rich calcium binding protein	AF158597|Hrc|15464|histidine rich calcium binding protein	BC141121|Hrc|15464|histidine rich calcium binding protein
mm9_v1_chr2_+_24935818_24936028	1.62992	FOX{D1,D2}.p2	BC031143|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	NM_028093|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AY364442|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AK008590|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8
mm9_v1_chr15_+_80629020_80629144	1.62737	FOX{D1,D2}.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr13_-_67552515_67552559	1.62332	FOX{D1,D2}.p2	BC080824|Zfp874a|238692|zinc finger protein 874a	AK136394|Zfp874a|238692|zinc finger protein 874a	AK049183|Zfp874a|238692|zinc finger protein 874a	AK145787|Zfp874a|238692|zinc finger protein 874a	NM_177712|Zfp874a|238692|zinc finger protein 874a
mm9_v1_chr3_+_85888355_85888355	1.62026	FOX{D1,D2}.p2	NM_001082414|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr7_-_77511242_77511282	1.61891	FOX{D1,D2}.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr12_-_86113816_86113911	1.61424	FOX{D1,D2}.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr14_-_32454146_32454155	1.61315	FOX{D1,D2}.p2	AK041686|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AJ132139|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK050078|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	NM_019975|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr1_-_55044032_55044295	1.60888	FOX{D1,D2}.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr11_-_54769601_54769632	1.60753	FOX{D1,D2}.p2	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr14_-_32454060_32454136	1.60732	FOX{D1,D2}.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr11_-_106649652_106649810	1.60161	FOX{D1,D2}.p2	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr1_-_54983211_54983245	1.59978	FOX{D1,D2}.p2	AK038343|Ankrd44|329154|ankyrin repeat domain 44	NM_001081433|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr7_+_126697853_126697853	1.59122	FOX{D1,D2}.p2	AK140827|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177977|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr7_-_123182257_123182257	1.59038	FOX{D1,D2}.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr4_-_11118342_11118420	1.58793	FOX{D1,D2}.p2	AK080292|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene	AK169448|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene
mm9_v1_chr1_-_186635045_186635085	1.58384	FOX{D1,D2}.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr18_+_3507920_3507972	1.57788	FOX{D1,D2}.p2	AK011305|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	AK143185|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	AK164632|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	AK017303|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	NM_026505|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	AK045192|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	AF153440|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)	BC019378|Bambi|68010|BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis)
mm9_v1_chr2_-_110145870_110145899	1.57434	FOX{D1,D2}.p2	BC019406|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	NM_130452|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	AK050010|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm9_v1_chr6_-_13627853_13628000	1.56646	FOX{D1,D2}.p2	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chr9_+_78463352_78463357	1.56069	FOX{D1,D2}.p2	AY083458|Cd109|235505|CD109 antigen	DQ832284|Cd109|235505|CD109 antigen	NM_153098|Cd109|235505|CD109 antigen
mm9_v1_chr6_-_119338677_119338775	1.55176	FOX{D1,D2}.p2	AK148295|Adipor2|68465|adiponectin receptor 2
mm9_v1_chrX_+_66015013_66015108	1.55127	FOX{D1,D2}.p2	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chr8_+_72897445_72897456	1.54265	FOX{D1,D2}.p2	NM_016685|Comp|12845|cartilage oligomeric matrix protein	AF033530|Comp|12845|cartilage oligomeric matrix protein	BC128368|Comp|12845|cartilage oligomeric matrix protein	BC128369|Comp|12845|cartilage oligomeric matrix protein
mm9_v1_chr1_+_57831651_57831771	1.5412	FOX{D1,D2}.p2	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr10_-_39451772_39451860	1.53267	FOX{D1,D2}.p2	AK049799|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene	AK164126|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene
mm9_v1_chr1_-_127289729_127289773	1.5326	FOX{D1,D2}.p2	
mm9_v1_chr11_-_101026399_101026436	1.53185	FOX{D1,D2}.p2	AK052371|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr4_+_97439255_97439362	1.53126	FOX{D1,D2}.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr14_-_69200119_69200151	1.52937	FOX{D1,D2}.p2	BC046324|Adamdec1|58860|ADAM-like, decysin 1	AJ242912|Adamdec1|58860|ADAM-like, decysin 1	NM_021475|Adamdec1|58860|ADAM-like, decysin 1	AK156586|Adamdec1|58860|ADAM-like, decysin 1	BC026542|Adamdec1|58860|ADAM-like, decysin 1
mm9_v1_chr12_-_78063011_78063244	1.51535	FOX{D1,D2}.p2	S80521|Max|17187|Max protein	BC138671|Max|17187|Max protein	BC138672|Max|17187|Max protein	BC145369|Max|17187|Max protein	M63903|Max|17187|Max protein	AK080431|Max|17187|Max protein	NM_001146176|Max|17187|Max protein	NM_008558|Max|17187|Max protein
mm9_v1_chr4_-_115840142_115840210	1.51338	FOX{D1,D2}.p2	BC003448|Tspan1|66805|tetraspanin 1	AK007428|Tspan1|66805|tetraspanin 1	AK078869|Tspan1|66805|tetraspanin 1	AK162521|Tspan1|66805|tetraspanin 1	NM_133681|Tspan1|66805|tetraspanin 1
mm9_v1_chr1_+_90303576_90303673	1.51333	FOX{D1,D2}.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr11_-_99412144_99412178	1.5109	FOX{D1,D2}.p2	BC120760|Krtap3-3|66380|keratin associated protein 3-3	BC120762|Krtap3-3|66380|keratin associated protein 3-3	AK009410|Krtap3-3|66380|keratin associated protein 3-3	AK010142|Krtap3-3|66380|keratin associated protein 3-3	NM_025524|Krtap3-3|66380|keratin associated protein 3-3	AK009052|Krtap3-3|66380|keratin associated protein 3-3
mm9_v1_chr19_+_55816299_55816310	1.50752	FOX{D1,D2}.p2	NM_001142918|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142919|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142920|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142921|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142922|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142923|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_009333|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	BC011397|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr5_+_119214502_119214629	1.50325	FOX{D1,D2}.p2	AK018557|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr10_+_110943412_110943638	1.5003	FOX{D1,D2}.p2	AK158890|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	AK148063|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr17_-_46381025_46381091	1.49628	FOX{D1,D2}.p2	
mm9_v1_chr11_+_120094240_120094260	1.49601	FOX{D1,D2}.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr2_-_152223710_152223930	1.49185	FOX{D1,D2}.p2	BC067019|Sox12|20667|SRY-box containing gene 12	NM_011438|Sox12|20667|SRY-box containing gene 12
mm9_v1_chr4_+_104829951_104829954	1.48916	FOX{D1,D2}.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr10_-_44178474_44178587	1.48902	FOX{D1,D2}.p2	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr5_+_120120870_120121055	1.488	FOX{D1,D2}.p2	BC096551|Tbx3|21386|T-box 3	AK052453|Tbx3|21386|T-box 3
mm9_v1_chr2_-_24775083_24775154	1.4856	FOX{D1,D2}.p2	AK054555|Ehmt1|77683|euchromatic histone methyltransferase 1	AK052174|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001012518|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001109686|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001109687|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_172545|Ehmt1|77683|euchromatic histone methyltransferase 1	AK084994|Ehmt1|77683|euchromatic histone methyltransferase 1	AK043898|Ehmt1|77683|euchromatic histone methyltransferase 1	AK082062|Ehmt1|77683|euchromatic histone methyltransferase 1	AB205007|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr12_+_85758140_85758149	1.477	FOX{D1,D2}.p2	AK009420|Rnf113a2|66381|ring finger protein 113A2	NM_025525|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr2_+_153968612_153968634	1.47519	FOX{D1,D2}.p2	NM_011126|Plunc|18843|palate, lung, and nasal epithelium associated	U69172|Plunc|18843|palate, lung, and nasal epithelium associated	BC054375|Plunc|18843|palate, lung, and nasal epithelium associated
mm9_v1_chr8_+_122223908_122223946	1.4668	FOX{D1,D2}.p2	AK137687|Atp2c2|69047|ATPase, Ca++ transporting, type 2C, member 2	NM_026922|Atp2c2|69047|ATPase, Ca++ transporting, type 2C, member 2
mm9_v1_chr7_+_119166928_119167032	1.46424	FOX{D1,D2}.p2	AK151051|Usp47|74996|ubiquitin specific peptidase 47	NM_133758|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr4_-_55545211_55545278	1.45891	FOX{D1,D2}.p2	BC010301|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr5_+_136363769_136363791	1.44981	FOX{D1,D2}.p2	NM_013560|Hspb1|15507|heat shock protein 1
mm9_v1_chr1_-_75130450_75130463	1.44965	FOX{D1,D2}.p2	BC117790|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	BC117791|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	BC094893|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	NM_194333|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	U25739|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3
mm9_v1_chrX_+_160577257_160577273	1.44673	FOX{D1,D2}.p2	NM_001130513|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr19_+_41904459_41904605	1.44579	FOX{D1,D2}.p2	NM_008043|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	AK015680|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	BC140987|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	U58974|Frat1|14296|frequently rearranged in advanced T-cell lymphomas
mm9_v1_chr17_+_34169289_34169362	1.44518	FOX{D1,D2}.p2	M84818|Rxrb|20182|retinoid X receptor beta	BC019432|Rxrb|20182|retinoid X receptor beta
mm9_v1_chr16_+_91677879_91677930	1.44282	FOX{D1,D2}.p2	BC029990|Son|20658|Son DNA binding protein
mm9_v1_chr7_+_132695758_132695826	1.43773	FOX{D1,D2}.p2	AK088086|Il4ra|16190|interleukin 4 receptor, alpha	AK137827|Il4ra|16190|interleukin 4 receptor, alpha	AK149603|Il4ra|16190|interleukin 4 receptor, alpha	AK149717|Il4ra|16190|interleukin 4 receptor, alpha	AK150584|Il4ra|16190|interleukin 4 receptor, alpha	AK151998|Il4ra|16190|interleukin 4 receptor, alpha	AK159375|Il4ra|16190|interleukin 4 receptor, alpha	AK153186|Il4ra|16190|interleukin 4 receptor, alpha	AK160016|Il4ra|16190|interleukin 4 receptor, alpha	BC112911|Il4ra|16190|interleukin 4 receptor, alpha	NM_001008700|Il4ra|16190|interleukin 4 receptor, alpha	AK042342|Il4ra|16190|interleukin 4 receptor, alpha	M27959|Il4ra|16190|interleukin 4 receptor, alpha	M27960|Il4ra|16190|interleukin 4 receptor, alpha	M29854|Il4ra|16190|interleukin 4 receptor, alpha
mm9_v1_chr11_-_54769546_54769594	1.43714	FOX{D1,D2}.p2	BC008186|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr1_+_59538966_59539075	1.43358	FOX{D1,D2}.p2	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr5_-_148706377_148706412	1.43293	FOX{D1,D2}.p2	AK156898|Slc46a3|71706|solute carrier family 46, member 3	NM_027872|Slc46a3|71706|solute carrier family 46, member 3	BC006902|Slc46a3|71706|solute carrier family 46, member 3	AK004609|Slc46a3|71706|solute carrier family 46, member 3
mm9_v1_chr11_-_33047217_33047399	1.43181	FOX{D1,D2}.p2	AK078245|Fgf18|14172|fibroblast growth factor 18	AB004639|Fgf18|14172|fibroblast growth factor 18	AF211187|Fgf18|14172|fibroblast growth factor 18	AF075291|Fgf18|14172|fibroblast growth factor 18	NM_008005|Fgf18|14172|fibroblast growth factor 18
mm9_v1_chrX_-_71618556_71618610	1.42399	FOX{D1,D2}.p2	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr12_-_74214214_74214231	1.4199	FOX{D1,D2}.p2	BC137931|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	BC137934|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	D50416|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	NM_011382|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)
mm9_v1_chr6_-_115568804_115568831	1.41807	FOX{D1,D2}.p2	AK189599|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr11_-_101087738_101087767	1.41252	FOX{D1,D2}.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr2_+_12845713_12845788	1.41112	FOX{D1,D2}.p2	AK012076|Pter|19212|phosphotriesterase related	AK135948|Pter|19212|phosphotriesterase related	AK075604|Pter|19212|phosphotriesterase related	U28016|Pter|19212|phosphotriesterase related	BC003793|Pter|19212|phosphotriesterase related	AK178461|Pter|19212|phosphotriesterase related	AK178809|Pter|19212|phosphotriesterase related	AK182714|Pter|19212|phosphotriesterase related	AK207887|Pter|19212|phosphotriesterase related	AK216138|Pter|19212|phosphotriesterase related
mm9_v1_chr11_+_108256590_108256640	1.40873	FOX{D1,D2}.p2	Y11356|Apoh|11818|apolipoprotein H	NM_013475|Apoh|11818|apolipoprotein H	BC011037|Apoh|11818|apolipoprotein H	BC019811|Apoh|11818|apolipoprotein H	AK010926|Apoh|11818|apolipoprotein H	S70439|Apoh|11818|apolipoprotein H	BC053338|Apoh|11818|apolipoprotein H	D10056|Apoh|11818|apolipoprotein H
mm9_v1_chrX_+_160577312_160577325	1.40748	FOX{D1,D2}.p2	EF408739|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	EF408740|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr10_-_44178372_44178385	1.4013	FOX{D1,D2}.p2	AK149344|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr6_+_88674398_88674540	1.40067	FOX{D1,D2}.p2	NM_001166249|Mgll|23945|monoglyceride lipase	NM_011844|Mgll|23945|monoglyceride lipase	AK131645|Mgll|23945|monoglyceride lipase	AK028008|Mgll|23945|monoglyceride lipase	AK148242|Mgll|23945|monoglyceride lipase	AK148395|Mgll|23945|monoglyceride lipase	AJ001118|Mgll|23945|monoglyceride lipase	BC057965|Mgll|23945|monoglyceride lipase	AK215869|Mgll|23945|monoglyceride lipase	AK185666|Mgll|23945|monoglyceride lipase	AK188627|Mgll|23945|monoglyceride lipase	AK206822|Mgll|23945|monoglyceride lipase	AK208240|Mgll|23945|monoglyceride lipase	AK211363|Mgll|23945|monoglyceride lipase
mm9_v1_chr11_-_121084021_121084125	1.40058	FOX{D1,D2}.p2	AK215969|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr1_-_55135054_55135143	1.39359	FOX{D1,D2}.p2	AK206123|Hspd1|15510|heat shock protein 1 (chaperonin)	AK180922|Hspd1|15510|heat shock protein 1 (chaperonin)	AK208190|Hspd1|15510|heat shock protein 1 (chaperonin)	AK213559|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr11_+_117127762_117127806	1.39296	FOX{D1,D2}.p2	AK122415|Sept9|53860|septin 9
mm9_v1_chr6_-_88791829_88791867	1.39269	FOX{D1,D2}.p2	AB053477|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1	BC003234|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1
mm9_v1_chr1_+_82335623_82335683	1.39216	FOX{D1,D2}.p2	AK076751|Rhbdd1|76867|rhomboid domain containing 1	NM_001122685|Rhbdd1|76867|rhomboid domain containing 1	AK015167|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr3_+_135488454_135488592	1.38896	FOX{D1,D2}.p2	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr15_+_99223377_99223451	1.38081	FOX{D1,D2}.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr7_+_26696262_26696351	1.38078	FOX{D1,D2}.p2	AF129405|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr8_+_122223953_122224064	1.37947	FOX{D1,D2}.p2	EF688288|Atp2c2|69047|ATPase, Ca++ transporting, type 2C, member 2
mm9_v1_chr11_+_3931731_3931881	1.3791	FOX{D1,D2}.p2	BC026948|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	NM_146013|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	AK028954|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)
mm9_v1_chr3_+_135488617_135488753	1.37262	FOX{D1,D2}.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr11_+_96132643_96132643	1.35905	FOX{D1,D2}.p2	NM_008270|Hoxb9|15417|homeobox B9
mm9_v1_chr2_+_112106470_112106612	1.35173	FOX{D1,D2}.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr11_+_74433092_74433113	1.34867	FOX{D1,D2}.p2	AK143211|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene	NM_001013784|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene
mm9_v1_chr13_-_12892317_12892348	1.34853	FOX{D1,D2}.p2	BC100299|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC058816|Prl2c4|26421|prolactin family 2, subfamily c, member 4	NM_011954|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC064772|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC132078|Prl2c3|18812|prolactin family 2, subfamily c, member 3	BC132080|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK145995|Prl2c3|18812|prolactin family 2, subfamily c, member 3	K03235|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK164068|Prl2c3|18812|prolactin family 2, subfamily c, member 3	NM_011118|Prl2c3|18812|prolactin family 2, subfamily c, member 3
mm9_v1_chr19_+_23215817_23215902	1.34642	FOX{D1,D2}.p2	BC138724|Klf9|16601|Kruppel-like factor 9	BC138725|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr12_-_55796770_55796822	1.34472	FOX{D1,D2}.p2	AY882557|Eapp|66266|E2F-associated phosphoprotein	AK007442|Eapp|66266|E2F-associated phosphoprotein	AK012800|Eapp|66266|E2F-associated phosphoprotein
mm9_v1_chr19_+_23215725_23215754	1.33404	FOX{D1,D2}.p2	BC106117|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr14_+_79601537_79601578	1.333	FOX{D1,D2}.p2	
mm9_v1_chr17_+_34375847_34375923	1.3301	FOX{D1,D2}.p2	AK172191|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155650|H2-Ob|15002|histocompatibility 2, O region beta locus	NM_010389|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172273|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172299|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155144|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127027|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127028|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100707|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100710|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100709|H2-Ob|15002|histocompatibility 2, O region beta locus
mm9_v1_chr7_+_138712015_138712162	1.3265	FOX{D1,D2}.p2	AK039977|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK079742|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr15_-_101363197_101363254	1.32216	FOX{D1,D2}.p2	AY028607|Krt84|16680|keratin 84	BC114971|Krt84|16680|keratin 84	NM_008474|Krt84|16680|keratin 84
mm9_v1_chr9_-_44610921_44611015	1.31631	FOX{D1,D2}.p2	BC021608|Ttc36|192653|tetratricopeptide repeat domain 36	AK165811|Ttc36|192653|tetratricopeptide repeat domain 36	BC026825|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr1_+_39044599_39044675	1.31592	FOX{D1,D2}.p2	AK168509|Pdcl3|68833|phosducin-like 3	BC005601|Pdcl3|68833|phosducin-like 3	AK078372|Pdcl3|68833|phosducin-like 3	NM_026850|Pdcl3|68833|phosducin-like 3	AK004334|Pdcl3|68833|phosducin-like 3	AK169572|Pdcl3|68833|phosducin-like 3
mm9_v1_chr14_+_102239673_102239864	1.31536	FOX{D1,D2}.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr9_+_53698053_53698076	1.30698	FOX{D1,D2}.p2	AK009005|Sln|66402|sarcolipin	AK008896|Sln|66402|sarcolipin	NM_025540|Sln|66402|sarcolipin	AK008863|Sln|66402|sarcolipin	BC028496|Sln|66402|sarcolipin
mm9_v1_chr13_-_27808594_27808605	1.29759	FOX{D1,D2}.p2	BC099470|Prl7d1|18814|prolactin family 7, subfamily d, member 1	AK005421|Prl7d1|18814|prolactin family 7, subfamily d, member 1	AK005557|Prl7d1|18814|prolactin family 7, subfamily d, member 1	AK019461|Prl7d1|18814|prolactin family 7, subfamily d, member 1	NM_011120|Prl7d1|18814|prolactin family 7, subfamily d, member 1	X02594|Prl7d1|18814|prolactin family 7, subfamily d, member 1
mm9_v1_chr18_-_65553541_65553541	1.29481	FOX{D1,D2}.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr10_-_127999933_127999966	1.29385	FOX{D1,D2}.p2	AK205907|Pa2g4|18813|proliferation-associated 2G4	AK207779|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr1_+_61034757_61034802	1.28971	FOX{D1,D2}.p2	NM_017480|Icos|54167|inducible T-cell co-stimulator	AK030827|Icos|54167|inducible T-cell co-stimulator	AJ250559|Icos|54167|inducible T-cell co-stimulator	BC034852|Icos|54167|inducible T-cell co-stimulator	AB023132|Icos|54167|inducible T-cell co-stimulator	AF257230|Icos|54167|inducible T-cell co-stimulator	AF216748|Icos|54167|inducible T-cell co-stimulator
mm9_v1_chr2_+_60047917_60048030	1.28316	FOX{D1,D2}.p2	AK034109|March7|57438|membrane-associated ring finger (C3HC4) 7	AK143177|March7|57438|membrane-associated ring finger (C3HC4) 7	AK166666|March7|57438|membrane-associated ring finger (C3HC4) 7	AK168555|March7|57438|membrane-associated ring finger (C3HC4) 7	AF155739|March7|57438|membrane-associated ring finger (C3HC4) 7	NM_020575|March7|57438|membrane-associated ring finger (C3HC4) 7	AK167246|March7|57438|membrane-associated ring finger (C3HC4) 7
mm9_v1_chr13_-_67433435_67433495	1.27839	FOX{D1,D2}.p2	BC141018|Zfp595|218314|zinc finger protein 595	AK134150|Zfp595|218314|zinc finger protein 595	AK154058|Zfp595|218314|zinc finger protein 595	AK136304|Zfp595|218314|zinc finger protein 595	AK038563|Zfp595|218314|zinc finger protein 595	NM_177622|Zfp595|218314|zinc finger protein 595
mm9_v1_chr2_-_84265422_84265424	1.27657	FOX{D1,D2}.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr11_+_58020859_58020933	1.27438	FOX{D1,D2}.p2	AF071427|Igtp|16145|interferon gamma induced GTPase
mm9_v1_chr4_-_119088052_119088125	1.27248	FOX{D1,D2}.p2	AK078362|Ccdc30|73332|coiled-coil domain containing 30	BC114436|Ccdc30|73332|coiled-coil domain containing 30	AK163185|Ccdc30|73332|coiled-coil domain containing 30	AK225009|Ccdc30|73332|coiled-coil domain containing 30	AK005616|Ccdc30|73332|coiled-coil domain containing 30	AK148014|Ccdc30|73332|coiled-coil domain containing 30	AK225018|Ccdc30|73332|coiled-coil domain containing 30	AK079015|Ccdc30|73332|coiled-coil domain containing 30	NM_029286|Ccdc30|73332|coiled-coil domain containing 30
mm9_v1_chr7_+_52882857_52882906	1.27237	FOX{D1,D2}.p2	AK156602|Rasip1|69903|Ras interacting protein 1	BC127059|Rasip1|69903|Ras interacting protein 1	BC028483|Rasip1|69903|Ras interacting protein 1	BC150766|Rasip1|69903|Ras interacting protein 1	NM_028544|Rasip1|69903|Ras interacting protein 1
mm9_v1_chr2_-_34678700_34678700	1.26716	FOX{D1,D2}.p2	AF140683|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164768|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr3_-_98566258_98566332	1.26599	FOX{D1,D2}.p2	M77015|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	AK149452|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	BC089581|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001012306|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161744|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161745|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
mm9_v1_chr13_-_13097649_13097665	1.26529	FOX{D1,D2}.p2	BC064771|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC080826|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr3_+_123058707_123058740	1.26208	FOX{D1,D2}.p2	AK009425|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr12_+_33535650_33535652	1.25911	FOX{D1,D2}.p2	AK004117|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr11_+_114713142_114713183	1.25732	FOX{D1,D2}.p2	AK128950|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C
mm9_v1_chr5_-_87964170_87964216	1.25675	FOX{D1,D2}.p2	BC024361|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr6_+_117857771_117857856	1.25559	FOX{D1,D2}.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr14_+_56178853_56178921	1.25522	FOX{D1,D2}.p2	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr19_+_30104914_30105033	1.25519	FOX{D1,D2}.p2	AK082518|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK031036|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK042321|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK051743|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK080925|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK041564|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	BC060241|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	NM_144873|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2
mm9_v1_chr17_-_33855557_33855658	1.24877	FOX{D1,D2}.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr14_-_105576480_105576547	1.24725	FOX{D1,D2}.p2	BC066051|Rbm26|74213|RNA binding motif protein 26	AK051686|Rbm26|74213|RNA binding motif protein 26	BC049360|Rbm26|74213|RNA binding motif protein 26	AK172039|Rbm26|74213|RNA binding motif protein 26	AK139077|Rbm26|74213|RNA binding motif protein 26	NM_134077|Rbm26|74213|RNA binding motif protein 26
mm9_v1_chr2_+_139319648_139319745	1.24697	FOX{D1,D2}.p2	AK054240|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078686|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	NM_175467|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078679|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr11_-_102666332_102666332	1.24258	FOX{D1,D2}.p2	AK085224|Gjc1|14615|gap junction protein, gamma 1	AK085236|Gjc1|14615|gap junction protein, gamma 1	NM_008122|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr1_+_157882793_157883024	1.24148	FOX{D1,D2}.p2	NM_172843|Tor1aip2|240832|torsin A interacting protein 2	AK150117|Tor1aip2|240832|torsin A interacting protein 2	NM_001160180|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr9_-_123893240_123893240	1.23348	FOX{D1,D2}.p2	BC127143|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	BC128466|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	NM_007718|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1
mm9_v1_chr6_-_88791875_88791901	1.22688	FOX{D1,D2}.p2	AK049100|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1	AK155432|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1	AK155505|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1	AK155644|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1	AK088437|Abtb1|80283|ankyrin repeat and BTB (POZ) domain containing 1
mm9_v1_chr3_+_19857375_19857397	1.22679	FOX{D1,D2}.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chrX_-_34708836_34708836	1.22163	FOX{D1,D2}.p2	AK133120|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147265|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147494|Akap14|434756|A kinase (PRKA) anchor protein 14	NM_001033785|Akap14|434756|A kinase (PRKA) anchor protein 14
mm9_v1_chr4_-_129317895_129318048	1.22035	FOX{D1,D2}.p2	AK135290|Txlna|109658|taxilin alpha	AK160829|Txlna|109658|taxilin alpha	AK168418|Txlna|109658|taxilin alpha
mm9_v1_chr10_+_21698470_21698479	1.21932	FOX{D1,D2}.p2	NM_001161847|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr8_-_107779027_107779052	1.21839	FOX{D1,D2}.p2	AK169360|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	NM_178879|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	AK032108|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene
mm9_v1_chr8_-_37631772_37631789	1.21676	FOX{D1,D2}.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr10_+_127691240_127691249	1.21479	FOX{D1,D2}.p2	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chr11_+_46624300_46624301	1.21315	FOX{D1,D2}.p2	AK080212|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	NM_178759|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK046560|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK079787|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK080042|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376716|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376717|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4
mm9_v1_chr2_-_110145819_110145855	1.20721	FOX{D1,D2}.p2	AY033514|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm9_v1_chr17_-_34764290_34764395	1.20657	FOX{D1,D2}.p2	BC052330|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr15_+_6249788_6249867	1.20542	FOX{D1,D2}.p2	NM_001008702|Dab2|13132|disabled homolog 2 (Drosophila)	AK002850|Dab2|13132|disabled homolog 2 (Drosophila)	AK165519|Dab2|13132|disabled homolog 2 (Drosophila)	BC016887|Dab2|13132|disabled homolog 2 (Drosophila)	AK052613|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr5_+_150331253_150331253	1.20381	FOX{D1,D2}.p2	AK087389|Wdr95|381693|WD40 repeat domain 95	NM_029440|Wdr95|381693|WD40 repeat domain 95
mm9_v1_chr18_-_4352916_4352956	1.1986	FOX{D1,D2}.p2	AK157123|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK140334|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149624|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149846|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	D13759|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	NM_007746|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK171403|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8
mm9_v1_chr15_-_96529998_96530181	1.1972	FOX{D1,D2}.p2	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chrX_-_104035877_104035981	1.1927	FOX{D1,D2}.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr3_+_142223027_142223114	1.19077	FOX{D1,D2}.p2	BC019195|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr16_+_22920486_22920556	1.19017	FOX{D1,D2}.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr10_-_88969371_88969402	1.18035	FOX{D1,D2}.p2	U09416|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	BC015261|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK050566|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK002513|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK132255|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163700|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_009108|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr9_-_108551631_108551731	1.17598	FOX{D1,D2}.p2	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr7_-_108729674_108729685	1.17557	FOX{D1,D2}.p2	AF016463|Art2b|11872|ADP-ribosyltransferase 2b	AF016465|Art2b|11872|ADP-ribosyltransferase 2b	NM_019915|Art2b|11872|ADP-ribosyltransferase 2b	X87612|Art2b|11872|ADP-ribosyltransferase 2b	S79913|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr5_+_32761560_32761602	1.17506	FOX{D1,D2}.p2	AK169379|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr17_-_34941343_34941505	1.17121	FOX{D1,D2}.p2	BC127167|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1	NM_009995|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1	AK146565|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1
mm9_v1_chr15_-_82184631_82184726	1.17092	FOX{D1,D2}.p2	AK002749|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK010988|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK012328|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	BC048451|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	NM_025987|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm9_v1_chr9_-_107516538_107516684	1.16847	FOX{D1,D2}.p2	
mm9_v1_chr2_-_60590923_60591029	1.16756	FOX{D1,D2}.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr17_-_66234198_66234307	1.16101	FOX{D1,D2}.p2	BC075732|Ralbp1|19765|ralA binding protein 1	NM_001198949|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr14_-_49865069_49865102	1.15796	FOX{D1,D2}.p2	AK005866|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	BC026534|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	AK007176|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	NM_025956|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene
mm9_v1_chr1_-_157883424_157883442	1.15428	FOX{D1,D2}.p2	BC010841|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr12_-_105143089_105143106	1.15217	FOX{D1,D2}.p2	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr11_-_106650166_106650257	1.15172	FOX{D1,D2}.p2	AK166698|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr15_-_78298904_78298909	1.14376	FOX{D1,D2}.p2	AK004939|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr19_+_45101318_45101473	1.14075	FOX{D1,D2}.p2	AK202462|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK203408|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK205448|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK210216|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215584|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215776|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK217660|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr17_+_78599556_78599594	1.13293	FOX{D1,D2}.p2	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr16_+_91373153_91373272	1.13054	FOX{D1,D2}.p2	AF013486|Ifnar2|15976|interferon (alpha and beta) receptor 2	Y09813|Ifnar2|15976|interferon (alpha and beta) receptor 2	AF013274|Ifnar2|15976|interferon (alpha and beta) receptor 2
mm9_v1_chr10_-_3557441_3557947	1.12965	FOX{D1,D2}.p2	AY397681|Oprm1|18390|opioid receptor, mu 1	AF062754|Oprm1|18390|opioid receptor, mu 1	DQ363376|Oprm1|18390|opioid receptor, mu 1	DQ363377|Oprm1|18390|opioid receptor, mu 1	AB441734|Oprm1|18390|opioid receptor, mu 1	AB441735|Oprm1|18390|opioid receptor, mu 1	AB441736|Oprm1|18390|opioid receptor, mu 1	AB441737|Oprm1|18390|opioid receptor, mu 1	AB441738|Oprm1|18390|opioid receptor, mu 1	AB441739|Oprm1|18390|opioid receptor, mu 1	AB441740|Oprm1|18390|opioid receptor, mu 1	AB441741|Oprm1|18390|opioid receptor, mu 1	AB441742|Oprm1|18390|opioid receptor, mu 1	AB441743|Oprm1|18390|opioid receptor, mu 1	AK038389|Oprm1|18390|opioid receptor, mu 1	AF062753|Oprm1|18390|opioid receptor, mu 1	AF074973|Oprm1|18390|opioid receptor, mu 1	AF074974|Oprm1|18390|opioid receptor, mu 1	AF167565|Oprm1|18390|opioid receptor, mu 1	AF167566|Oprm1|18390|opioid receptor, mu 1	AF167567|Oprm1|18390|opioid receptor, mu 1	AF167568|Oprm1|18390|opioid receptor, mu 1	AF346812|Oprm1|18390|opioid receptor, mu 1	AF346813|Oprm1|18390|opioid receptor, mu 1	AF346814|Oprm1|18390|opioid receptor, mu 1	AY036621|Oprm1|18390|opioid receptor, mu 1	AY160190|Oprm1|18390|opioid receptor, mu 1	AY923181|Oprm1|18390|opioid receptor, mu 1	AY923183|Oprm1|18390|opioid receptor, mu 1	BC119545|Oprm1|18390|opioid receptor, mu 1	DQ868787|Oprm1|18390|opioid receptor, mu 1	DQ868788|Oprm1|18390|opioid receptor, mu 1	EF105311|Oprm1|18390|opioid receptor, mu 1	EF105312|Oprm1|18390|opioid receptor, mu 1	EF105313|Oprm1|18390|opioid receptor, mu 1	EF105314|Oprm1|18390|opioid receptor, mu 1	AY923182|Oprm1|18390|opioid receptor, mu 1	AB047546|Oprm1|18390|opioid receptor, mu 1	U19380|Oprm1|18390|opioid receptor, mu 1	NM_001039652|Oprm1|18390|opioid receptor, mu 1	U26915|Oprm1|18390|opioid receptor, mu 1
mm9_v1_chr2_+_127680363_127680363	1.12804	FOX{D1,D2}.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr16_+_4639921_4640005	1.12133	FOX{D1,D2}.p2	AK132325|Vasn|246154|vasorin	NM_139307|Vasn|246154|vasorin	AK083684|Vasn|246154|vasorin	AK012169|Vasn|246154|vasorin	BC050274|Vasn|246154|vasorin	AJ458938|Vasn|246154|vasorin
mm9_v1_chr19_-_4877874_4877883	1.11825	FOX{D1,D2}.p2	BC111890|Actn3|11474|actinin alpha 3	AF093775|Actn3|11474|actinin alpha 3	NM_013456|Actn3|11474|actinin alpha 3
mm9_v1_chr14_+_3224445_3224445	1.11222	FOX{D1,D2}.p2	AK085928|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene	NM_177135|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene
mm9_v1_chr10_+_23571267_23571295	1.10865	FOX{D1,D2}.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr2_+_32390780_32390878	1.10847	FOX{D1,D2}.p2	AK131145|Fam102a|98952|family with sequence similarity 102, member A	AK170536|Fam102a|98952|family with sequence similarity 102, member A	AK049032|Fam102a|98952|family with sequence similarity 102, member A	NM_153560|Fam102a|98952|family with sequence similarity 102, member A
mm9_v1_chr15_+_101303908_101304071	1.10645	FOX{D1,D2}.p2	AK161149|Krt86|16679|keratin 86	NM_010667|Krt86|16679|keratin 86	BC139222|Krt86|16679|keratin 86	X99143|Krt86|16679|keratin 86
mm9_v1_chr15_+_102797226_102797241	1.10625	FOX{D1,D2}.p2	BC053405|Hoxc10|209448|homeobox C10	AK138664|Hoxc10|209448|homeobox C10
mm9_v1_chr8_-_107779002_107779023	1.10569	FOX{D1,D2}.p2	BC108347|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	BC047209|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene
mm9_v1_chr10_+_127529818_127529845	1.10278	FOX{D1,D2}.p2	AK133149|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	BC048415|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	NM_054078|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A
mm9_v1_chr12_-_15823536_15823550	1.10274	FOX{D1,D2}.p2	BC037387|Trib2|217410|tribbles homolog 2 (Drosophila)	AK044747|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr1_-_138856866_138857085	1.10138	FOX{D1,D2}.p2	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr8_+_111482660_111482698	1.09984	FOX{D1,D2}.p2	AK031741|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chr19_+_46781921_46781932	1.09889	FOX{D1,D2}.p2	NM_020577|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr1_-_173211220_173211350	1.09751	FOX{D1,D2}.p2	AK134341|Ppox|19044|protoporphyrinogen oxidase	AK142632|Ppox|19044|protoporphyrinogen oxidase	BC002047|Ppox|19044|protoporphyrinogen oxidase	U25114|Ppox|19044|protoporphyrinogen oxidase	NM_008911|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr13_+_4573320_4573394	1.09251	FOX{D1,D2}.p2	AK020439|Akr1c21|77337|aldo-keto reductase family 1, member C21	NM_029901|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC061057|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC013531|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC091761|Akr1c21|77337|aldo-keto reductase family 1, member C21	AB178898|Akr1c21|77337|aldo-keto reductase family 1, member C21	AY742217|Akr1c21|77337|aldo-keto reductase family 1, member C21
mm9_v1_chr6_-_87800966_87801099	1.08712	FOX{D1,D2}.p2	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr11_+_78006893_78006893	1.0767	FOX{D1,D2}.p2	AK160258|Proca1|216974|protein interacting with cyclin A1	NM_001045516|Proca1|216974|protein interacting with cyclin A1
mm9_v1_chr6_+_83692983_83693062	1.07554	FOX{D1,D2}.p2	AK078810|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK168980|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AF435091|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085549|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	NM_134157|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC017127|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC080796|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052604|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC062202|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052707|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085469|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC058584|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC013168|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1
mm9_v1_chr11_+_49477111_49477127	1.07454	FOX{D1,D2}.p2	AF313456|Scgb3a1|68662|secretoglobin, family 3A, member 1	AF313457|Scgb3a1|68662|secretoglobin, family 3A, member 1	NM_054037|Scgb3a1|68662|secretoglobin, family 3A, member 1	NM_170727|Scgb3a1|68662|secretoglobin, family 3A, member 1	AK003988|Scgb3a1|68662|secretoglobin, family 3A, member 1	BC086910|Scgb3a1|68662|secretoglobin, family 3A, member 1	AF436840|Scgb3a1|68662|secretoglobin, family 3A, member 1
mm9_v1_chr2_+_146681579_146681639	1.07246	FOX{D1,D2}.p2	BC150844|Plk1s1|228730|polo-like kinase 1 substrate 1	BC150845|Plk1s1|228730|polo-like kinase 1 substrate 1	AK135486|Plk1s1|228730|polo-like kinase 1 substrate 1	NM_001033298|Plk1s1|228730|polo-like kinase 1 substrate 1
mm9_v1_chr16_+_33500899_33501016	1.07072	FOX{D1,D2}.p2	AK037342|Zfp148|22661|zinc finger protein 148
mm9_v1_chr8_-_37631532_37631612	1.06915	FOX{D1,D2}.p2	BC096052|Dlc1|50768|deleted in liver cancer 1	BC028562|Dlc1|50768|deleted in liver cancer 1	BC056230|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr1_-_30930538_30930588	1.06023	FOX{D1,D2}.p2	AK045780|Phf3|213109|PHD finger protein 3
mm9_v1_chr7_+_29325883_29325903	1.05999	FOX{D1,D2}.p2	AK003083|Sycn|68416|syncollin	BC019567|Sycn|68416|syncollin	NM_026716|Sycn|68416|syncollin
mm9_v1_chr4_+_134479542_134479573	1.05949	FOX{D1,D2}.p2	BC002142|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC045256|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC051556|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC032060|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC043057|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AB041555|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK152736|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC054728|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr11_+_117127516_117127564	1.05868	FOX{D1,D2}.p2	NM_001113487|Sept9|53860|septin 9
mm9_v1_chr5_+_136363810_136363893	1.05717	FOX{D1,D2}.p2	BC018257|Hspb1|15507|heat shock protein 1	AK003119|Hspb1|15507|heat shock protein 1	AK168927|Hspb1|15507|heat shock protein 1	AK010663|Hspb1|15507|heat shock protein 1	X14686|Hspb1|15507|heat shock protein 1	BC090388|Hspb1|15507|heat shock protein 1	BC099463|Hspb1|15507|heat shock protein 1
mm9_v1_chr3_-_35828995_35828995	1.05474	FOX{D1,D2}.p2	AK139845|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	NM_033623|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
mm9_v1_chr10_+_126938744_126938772	1.04904	FOX{D1,D2}.p2	BC067208|Stac3|237611|SH3 and cysteine rich domain 3	AK036516|Stac3|237611|SH3 and cysteine rich domain 3	NM_177707|Stac3|237611|SH3 and cysteine rich domain 3
mm9_v1_chr12_-_84938063_84938077	1.04726	FOX{D1,D2}.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr9_+_118415358_118415568	1.0426	FOX{D1,D2}.p2	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr11_+_106650565_106650638	1.03913	FOX{D1,D2}.p2	NM_001166685|Ccdc45|320162|coiled-coil domain containing 45	NM_177088|Ccdc45|320162|coiled-coil domain containing 45	AK076400|Ccdc45|320162|coiled-coil domain containing 45	AK165351|Ccdc45|320162|coiled-coil domain containing 45	BC116308|Ccdc45|320162|coiled-coil domain containing 45	BC116309|Ccdc45|320162|coiled-coil domain containing 45	BC090675|Ccdc45|320162|coiled-coil domain containing 45	AK052705|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr4_+_15885171_15885371	1.03781	FOX{D1,D2}.p2	AB016988|Nbn|27354|nibrin
mm9_v1_chr11_+_105846442_105846551	1.03658	FOX{D1,D2}.p2	BC052531|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr9_-_121825407_121825416	1.03227	FOX{D1,D2}.p2	BC049969|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	AF090317|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010973|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010974|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr14_+_102237708_102237728	1.03021	FOX{D1,D2}.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr10_-_62255007_62255115	1.02885	FOX{D1,D2}.p2	BC034174|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC051052|Ccar1|67500|cell division cycle and apoptosis regulator 1	NM_026201|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr2_+_122573252_122573297	1.02317	FOX{D1,D2}.p2	AK206166|Pldn|18457|pallidin
mm9_v1_chr6_+_15135505_15135508	1.02105	FOX{D1,D2}.p2	BC062926|Foxp2|114142|forkhead box P2	NM_212435|Foxp2|114142|forkhead box P2	BC058960|Foxp2|114142|forkhead box P2
mm9_v1_chr8_+_107694536_107694875	1.01008	FOX{D1,D2}.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr8_+_108380603_108380698	1.00867	FOX{D1,D2}.p2	AK210001|Thap11|59016|THAP domain containing 11
mm9_v1_chr7_-_90803895_90803940	1.00822	FOX{D1,D2}.p2	AF017111|Il16|16170|interleukin 16	AK137802|Il16|16170|interleukin 16	AK169551|Il16|16170|interleukin 16	AK038319|Il16|16170|interleukin 16
mm9_v1_chr2_+_145648290_145648325	1.00741	FOX{D1,D2}.p2	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr4_-_94316806_94316834	1.00614	FOX{D1,D2}.p2	BC061228|Lrrc19|100061|leucine rich repeat containing 19	AK033594|Lrrc19|100061|leucine rich repeat containing 19	NM_175305|Lrrc19|100061|leucine rich repeat containing 19
mm9_v1_chr17_+_45704145_45704512	1.00571	FOX{D1,D2}.p2	AK211181|Slc35b2|73836|solute carrier family 35, member B2	AK212100|Slc35b2|73836|solute carrier family 35, member B2	AK207266|Slc35b2|73836|solute carrier family 35, member B2	AK212091|Slc35b2|73836|solute carrier family 35, member B2	AK214463|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr2_+_155576833_155576871	1.00525	FOX{D1,D2}.p2	AK143719|Procr|19124|protein C receptor, endothelial
mm9_v1_chr11_-_55233354_55233357	0.999894	FOX{D1,D2}.p2	BC004638|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr6_+_59158860_59158986	0.994079	FOX{D1,D2}.p2	NM_001081145|Tigd2|68140|tigger transposable element derived 2	AK019456|Tigd2|68140|tigger transposable element derived 2	AK005391|Tigd2|68140|tigger transposable element derived 2
mm9_v1_chr9_-_61874565_61874622	0.98784	FOX{D1,D2}.p2	AK002481|Paqr5|74090|progestin and adipoQ receptor family member V	AY424294|Paqr5|74090|progestin and adipoQ receptor family member V	AK085411|Paqr5|74090|progestin and adipoQ receptor family member V	NM_028748|Paqr5|74090|progestin and adipoQ receptor family member V	AK035475|Paqr5|74090|progestin and adipoQ receptor family member V	AK052776|Paqr5|74090|progestin and adipoQ receptor family member V	AK086679|Paqr5|74090|progestin and adipoQ receptor family member V	BC054855|Paqr5|74090|progestin and adipoQ receptor family member V
mm9_v1_chr7_+_29767872_29767891	0.987509	FOX{D1,D2}.p2	NM_008279|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1	AK146273|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1	BC005433|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1
mm9_v1_chr11_+_70460758_70460819	0.982995	FOX{D1,D2}.p2	AK017523|Rnf167|70510|ring finger protein 167
mm9_v1_chrX_+_130442964_130443234	0.980958	FOX{D1,D2}.p2	NM_001083895|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	NM_026838|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	AK136935|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	BC028307|Srpx2|68792|sushi-repeat-containing protein, X-linked 2
mm9_v1_chr4_+_134479583_134479637	0.980408	FOX{D1,D2}.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chrX_+_100516736_100516748	0.976117	FOX{D1,D2}.p2	L08061|Cdx4|12592|caudal type homeobox 4	NM_007674|Cdx4|12592|caudal type homeobox 4	BC119158|Cdx4|12592|caudal type homeobox 4
mm9_v1_chr2_-_25483295_25483445	0.974833	FOX{D1,D2}.p2	AB222271|Fcna|14133|ficolin A	CT010383|Fcna|14133|ficolin A	AB007813|Fcna|14133|ficolin A	BC019180|Fcna|14133|ficolin A	AK138752|Fcna|14133|ficolin A
mm9_v1_chr11_-_116711807_116712035	0.972768	FOX{D1,D2}.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr17_+_23797470_23797489	0.967914	FOX{D1,D2}.p2	AK133729|Ccdc64b|212733|coiled-coil domain containing 64B	AK036793|Ccdc64b|212733|coiled-coil domain containing 64B	BC038613|Ccdc64b|212733|coiled-coil domain containing 64B	NM_153784|Ccdc64b|212733|coiled-coil domain containing 64B
mm9_v1_chr11_-_115884712_115884736	0.966286	FOX{D1,D2}.p2	AK213191|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr4_-_150422072_150422126	0.963494	FOX{D1,D2}.p2	
mm9_v1_chr6_-_148894953_148895000	0.9588	FOX{D1,D2}.p2	BC076599|Fam60a|56306|family with sequence similarity 60, member A	NM_019643|Fam60a|56306|family with sequence similarity 60, member A	AK166569|Fam60a|56306|family with sequence similarity 60, member A	AK145384|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr5_+_106039499_106039528	0.950972	FOX{D1,D2}.p2	AK081556|Lrrc8c|100604|leucine rich repeat containing 8 family, member C
mm9_v1_chr5_-_137041850_137041964	0.949253	FOX{D1,D2}.p2	BC079570|Cux1|13047|cut-like homeobox 1
mm9_v1_chr9_+_92437056_92437289	0.94808	FOX{D1,D2}.p2	AK046364|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_001142916|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_011961|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK033363|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK157207|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK042433|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	BC021352|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AF080572|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr1_+_140864297_140864301	0.947407	FOX{D1,D2}.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr3_+_60432922_60432975	0.946654	FOX{D1,D2}.p2	AK166145|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr11_-_106640755_106640876	0.945895	FOX{D1,D2}.p2	AF177202|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC119131|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC144810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK042777|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK041591|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK164730|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK169977|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	NM_015810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit
mm9_v1_chrX_+_109424956_109425024	0.944628	FOX{D1,D2}.p2	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr13_+_13274982_13275048	0.944098	FOX{D1,D2}.p2	AK145824|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132514|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132516|Prl2c5|107849|prolactin family 2, subfamily c, member 5	AF128884|Prl2c5|107849|prolactin family 2, subfamily c, member 5	NM_181852|Prl2c5|107849|prolactin family 2, subfamily c, member 5
mm9_v1_chr18_+_44264117_44264290	0.94009	FOX{D1,D2}.p2	DQ437332|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK136616|Spink12|78242|serine peptidase inhibitor, Kazal type 11	NM_030061|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK020352|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145914|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145916|Spink12|78242|serine peptidase inhibitor, Kazal type 11
mm9_v1_chr3_+_95465860_95465866	0.936239	FOX{D1,D2}.p2	AK160634|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr9_-_56995928_56996111	0.934371	FOX{D1,D2}.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr14_-_46008425_46008617	0.928477	FOX{D1,D2}.p2	BC092047|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	BC031116|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK018499|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK050266|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AJ001006|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	NM_019425|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007722|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK167870|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK168074|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007647|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK008566|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK002466|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK028693|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007764|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK011098|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1
mm9_v1_chr4_+_15885062_15885148	0.92811	FOX{D1,D2}.p2	AK132302|Nbn|27354|nibrin	AK134805|Nbn|27354|nibrin	AK134960|Nbn|27354|nibrin	AK159790|Nbn|27354|nibrin	BC013190|Nbn|27354|nibrin	NM_013752|Nbn|27354|nibrin	BC044773|Nbn|27354|nibrin	AF076687|Nbn|27354|nibrin	BC055061|Nbn|27354|nibrin	AK031933|Nbn|27354|nibrin	AF092840|Nbn|27354|nibrin	AK160614|Nbn|27354|nibrin
mm9_v1_chr1_-_36864987_36865029	0.927956	FOX{D1,D2}.p2	BC120906|Tmem131|56030|transmembrane protein 131	BC139734|Tmem131|56030|transmembrane protein 131
mm9_v1_chr18_-_3281709_3281744	0.926606	FOX{D1,D2}.p2	AJ292222|Crem|12916|cAMP responsive element modulator	AJ311667|Crem|12916|cAMP responsive element modulator	S67786|Crem|12916|cAMP responsive element modulator	NM_001110854|Crem|12916|cAMP responsive element modulator	NM_001110855|Crem|12916|cAMP responsive element modulator
mm9_v1_chr10_+_52111413_52111541	0.926465	FOX{D1,D2}.p2	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr5_-_65323937_65324139	0.924635	FOX{D1,D2}.p2	AY009154|Tlr1|21897|toll-like receptor 1	NM_030682|Tlr1|21897|toll-like receptor 1	BC141319|Tlr1|21897|toll-like receptor 1	BC141321|Tlr1|21897|toll-like receptor 1
mm9_v1_chr9_-_121825422_121825428	0.92425	FOX{D1,D2}.p2	NM_010012|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr4_+_104829963_104829965	0.923913	FOX{D1,D2}.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr9_+_72584532_72584702	0.921752	FOX{D1,D2}.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr6_-_129573858_129573881	0.9201	FOX{D1,D2}.p2	AF030313|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_001083322|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK170499|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr16_+_91373008_91373145	0.91961	FOX{D1,D2}.p2	NM_001110498|Ifnar2|15976|interferon (alpha and beta) receptor 2	NM_010509|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK139169|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK010952|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK003185|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK150386|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK152878|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK153317|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151474|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151777|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151493|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK150597|Ifnar2|15976|interferon (alpha and beta) receptor 2	Y09864|Ifnar2|15976|interferon (alpha and beta) receptor 2	Y09865|Ifnar2|15976|interferon (alpha and beta) receptor 2
mm9_v1_chr16_+_62814501_62814570	0.913329	FOX{D1,D2}.p2	BC023414|Stx19|68159|syntaxin 19	NM_026588|Stx19|68159|syntaxin 19	AK020701|Stx19|68159|syntaxin 19	AK076337|Stx19|68159|syntaxin 19
mm9_v1_chr4_-_118951578_118951709	0.911337	FOX{D1,D2}.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr4_-_14548903_14548926	0.911049	FOX{D1,D2}.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr4_-_96330738_96330780	0.910728	FOX{D1,D2}.p2	AK098119|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	U62294|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	BC021624|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	AK149552|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr6_-_43616140_43616276	0.902965	FOX{D1,D2}.p2	BC023354|Tpk1|29807|thiamine pyrophosphokinase	AK052225|Tpk1|29807|thiamine pyrophosphokinase	AB027568|Tpk1|29807|thiamine pyrophosphokinase	AK035044|Tpk1|29807|thiamine pyrophosphokinase	AK136486|Tpk1|29807|thiamine pyrophosphokinase	NM_013861|Tpk1|29807|thiamine pyrophosphokinase	AK034521|Tpk1|29807|thiamine pyrophosphokinase	BC015246|Tpk1|29807|thiamine pyrophosphokinase	AK028431|Tpk1|29807|thiamine pyrophosphokinase	AK039131|Tpk1|29807|thiamine pyrophosphokinase	AK087844|Tpk1|29807|thiamine pyrophosphokinase
mm9_v1_chr2_-_119980243_119980354	0.901764	FOX{D1,D2}.p2	BC012272|Ehd4|98878|EH-domain containing 4	AK149760|Ehd4|98878|EH-domain containing 4	AK163835|Ehd4|98878|EH-domain containing 4	AK147186|Ehd4|98878|EH-domain containing 4	AK159235|Ehd4|98878|EH-domain containing 4	AK159597|Ehd4|98878|EH-domain containing 4	NM_133838|Ehd4|98878|EH-domain containing 4	AK166101|Ehd4|98878|EH-domain containing 4	AK169343|Ehd4|98878|EH-domain containing 4
mm9_v1_chr10_-_67741461_67741487	0.901176	FOX{D1,D2}.p2	AK029818|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AK031596|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AK017396|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	NM_023598|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AF280065|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr3_-_94910786_94910815	0.898497	FOX{D1,D2}.p2	AK158062|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK098097|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK150898|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK151984|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr3_-_103546233_103546253	0.896658	FOX{D1,D2}.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr3_-_51081421_51081435	0.895115	FOX{D1,D2}.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr7_+_54110611_54110615	0.892053	FOX{D1,D2}.p2	AK200978|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr11_+_69906145_69906162	0.88991	FOX{D1,D2}.p2	BC011197|Asgr2|11890|asialoglycoprotein receptor 2	NM_007493|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr11_-_99505377_99505402	0.888151	FOX{D1,D2}.p2	BC115508|Krtap4-7|76444|keratin associated protein 4-7	BC115509|Krtap4-7|76444|keratin associated protein 4-7	AK009665|Krtap4-7|76444|keratin associated protein 4-7	NM_029613|Krtap4-7|76444|keratin associated protein 4-7
mm9_v1_chr5_+_32761533_32761558	0.887929	FOX{D1,D2}.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr3_+_142223007_142223016	0.887823	FOX{D1,D2}.p2	AK132266|Gbp3|55932|guanylate binding protein 3	NM_018734|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr15_-_78299035_78299081	0.886105	FOX{D1,D2}.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr7_+_97575023_97575086	0.880943	FOX{D1,D2}.p2	BC060150|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr1_-_183111470_183111575	0.880137	FOX{D1,D2}.p2	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr17_-_51965912_51965912	0.873465	FOX{D1,D2}.p2	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr13_-_13097596_13097637	0.869583	FOX{D1,D2}.p2	K02245|Prl2c2|18811|prolactin family 2, subfamily c, member 2	NM_031191|Prl2c2|18811|prolactin family 2, subfamily c, member 2	X75557|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC145439|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC100300|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC056203|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr9_+_43552516_43552726	0.868905	FOX{D1,D2}.p2	BC060694|Pvrl1|58235|poliovirus receptor-related 1	NM_021424|Pvrl1|58235|poliovirus receptor-related 1	AF297665|Pvrl1|58235|poliovirus receptor-related 1	AF239762|Pvrl1|58235|poliovirus receptor-related 1	AF270977|Pvrl1|58235|poliovirus receptor-related 1
mm9_v1_chr12_+_85758189_85758266	0.866994	FOX{D1,D2}.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr5_-_109104587_109104667	0.865967	FOX{D1,D2}.p2	AY093420|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1	NM_174870|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1
mm9_v1_chr7_+_127987068_127987113	0.863293	FOX{D1,D2}.p2	AK080915|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr18_-_32071556_32071556	0.859818	FOX{D1,D2}.p2	NM_026006|Sft2d3|67158|SFT2 domain containing 3
mm9_v1_chrX_+_91480268_91480342	0.859811	FOX{D1,D2}.p2	AK081546|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039059|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039060|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039061|Klhl15|236904|kelch-like 15 (Drosophila)	NM_153165|Klhl15|236904|kelch-like 15 (Drosophila)	AK169500|Klhl15|236904|kelch-like 15 (Drosophila)	AK030432|Klhl15|236904|kelch-like 15 (Drosophila)	AK078112|Klhl15|236904|kelch-like 15 (Drosophila)	BC036978|Klhl15|236904|kelch-like 15 (Drosophila)
mm9_v1_chr7_-_48755259_48755259	0.859266	FOX{D1,D2}.p2	AK164198|AW146154|101835|expressed sequence AW146154	NM_001033530|AW146154|101835|expressed sequence AW146154
mm9_v1_chr13_+_74543843_74543994	0.858789	FOX{D1,D2}.p2	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene
mm9_v1_chr1_+_82313139_82313186	0.851278	FOX{D1,D2}.p2	NM_029777|Rhbdd1|76867|rhomboid domain containing 1	AK142277|Rhbdd1|76867|rhomboid domain containing 1	AK029751|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr3_+_67178016_67178018	0.850134	FOX{D1,D2}.p2	AK007292|Mlf1|17349|myeloid leukemia factor 1	AK133448|Mlf1|17349|myeloid leukemia factor 1	NM_001039543|Mlf1|17349|myeloid leukemia factor 1	NM_010801|Mlf1|17349|myeloid leukemia factor 1
mm9_v1_chr6_-_87793898_87794088	0.847856	FOX{D1,D2}.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr17_-_46575337_46575389	0.846332	FOX{D1,D2}.p2	AB069965|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026598|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026597|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC024119|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr5_+_143105467_143105567	0.840386	FOX{D1,D2}.p2	AK010881|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK043857|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK155113|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	BC044894|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	NM_178398|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK169051|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK172030|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2
mm9_v1_chr9_+_110235922_110235986	0.838015	FOX{D1,D2}.p2	AK035432|Scap|235623|SREBF chaperone
mm9_v1_chr10_+_74674793_74674887	0.837439	FOX{D1,D2}.p2	AK035500|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AY884297|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_153406|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK052716|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK172502|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr9_-_71743854_71743929	0.834197	FOX{D1,D2}.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr11_+_105043224_105043367	0.833925	FOX{D1,D2}.p2	BC066198|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	AK089925|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr19_+_30105077_30105267	0.83353	FOX{D1,D2}.p2	AK172682|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AF274047|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AB116653|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2
mm9_v1_chr5_-_129514313_129514509	0.832365	FOX{D1,D2}.p2	BC046279|Stx2|13852|syntaxin 2	AK165552|Stx2|13852|syntaxin 2	AK146462|Stx2|13852|syntaxin 2	AK167577|Stx2|13852|syntaxin 2	AK168067|Stx2|13852|syntaxin 2	NM_007941|Stx2|13852|syntaxin 2	D10475|Stx2|13852|syntaxin 2
mm9_v1_chr5_+_16059312_16059745	0.829345	FOX{D1,D2}.p2	AK052289|Hgf|15234|hepatocyte growth factor	AK042121|Hgf|15234|hepatocyte growth factor	NM_010427|Hgf|15234|hepatocyte growth factor	AK142159|Hgf|15234|hepatocyte growth factor	BC119228|Hgf|15234|hepatocyte growth factor	BC144764|Hgf|15234|hepatocyte growth factor	AK082461|Hgf|15234|hepatocyte growth factor	X72307|Hgf|15234|hepatocyte growth factor	X84046|Hgf|15234|hepatocyte growth factor	AF042856|Hgf|15234|hepatocyte growth factor	D10212|Hgf|15234|hepatocyte growth factor	D10213|Hgf|15234|hepatocyte growth factor	S71816|Hgf|15234|hepatocyte growth factor
mm9_v1_chr9_-_100935259_100935321	0.828944	FOX{D1,D2}.p2	BC026531|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AF327060|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC037082|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC055946|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK050366|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK004976|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	NM_025835|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK134437|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide
mm9_v1_chr7_+_28284335_28284344	0.827901	FOX{D1,D2}.p2	AJ222968|Prx|19153|periaxin	AJ222969|Prx|19153|periaxin	NM_019412|Prx|19153|periaxin	NM_198048|Prx|19153|periaxin
mm9_v1_chr8_-_73046985_73047078	0.824566	FOX{D1,D2}.p2	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr11_-_100355280_100355392	0.821204	FOX{D1,D2}.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr19_+_46781939_46782006	0.82097	FOX{D1,D2}.p2	AK006571|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AF166383|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK011320|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC145663|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK002801|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC013468|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr10_+_127691166_127691233	0.817797	FOX{D1,D2}.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr9_-_115152261_115152330	0.816222	FOX{D1,D2}.p2	
mm9_v1_chr10_-_94786634_94786766	0.815447	FOX{D1,D2}.p2	AK052304|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK136561|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AJ224738|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	NM_009950|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK163112|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK144648|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr5_+_77694506_77694565	0.814598	FOX{D1,D2}.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr6_+_90569209_90569239	0.812204	FOX{D1,D2}.p2	NM_001037493|Slc41a3|71699|solute carrier family 41, member 3	AK003140|Slc41a3|71699|solute carrier family 41, member 3
mm9_v1_chr12_-_58646914_58647013	0.811311	FOX{D1,D2}.p2	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chr18_+_3435267_3435359	0.811301	FOX{D1,D2}.p2	AK162910|Cul2|71745|cullin 2
mm9_v1_chr1_-_16094459_16094513	0.810415	FOX{D1,D2}.p2	BC086786|Rpl7|19989|ribosomal protein L7	M85235|Rpl7|19989|ribosomal protein L7	BC025909|Rpl7|19989|ribosomal protein L7	BC096452|Rpl7|19989|ribosomal protein L7	BC051261|Rpl7|19989|ribosomal protein L7	AK168137|Rpl7|19989|ribosomal protein L7	AK017074|Rpl7|19989|ribosomal protein L7	AK135460|Rpl7|19989|ribosomal protein L7	AK150943|Rpl7|19989|ribosomal protein L7	AK167124|Rpl7|19989|ribosomal protein L7	AK168227|Rpl7|19989|ribosomal protein L7	M29016|Rpl7|19989|ribosomal protein L7	AK146219|Rpl7|19989|ribosomal protein L7	AK050656|Rpl7|19989|ribosomal protein L7	AK088291|Rpl7|19989|ribosomal protein L7	NM_011291|Rpl7|19989|ribosomal protein L7
mm9_v1_chr10_+_79578849_79578946	0.808507	FOX{D1,D2}.p2	AF129870|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr1_-_138130840_138130840	0.808481	FOX{D1,D2}.p2	BC052416|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	BC053100|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	NM_028872|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene
mm9_v1_chr5_-_122017844_122017859	0.806562	FOX{D1,D2}.p2	AK178107|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK201448|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK219951|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr9_-_48772926_48773094	0.805826	FOX{D1,D2}.p2	AF155045|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	BC046990|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	AK085213|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	NM_020274|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B
mm9_v1_chr9_-_61918412_61918412	0.805568	FOX{D1,D2}.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr17_-_34764041_34764054	0.803883	FOX{D1,D2}.p2	BC013462|Ppt2|54397|palmitoyl-protein thioesterase 2	NM_019441|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr14_+_48740495_48740543	0.802674	FOX{D1,D2}.p2	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr11_+_102294276_102294332	0.801931	FOX{D1,D2}.p2	BC037047|Grn|14824|granulin	X62321|Grn|14824|granulin	AK196399|Grn|14824|granulin	AK205747|Grn|14824|granulin
mm9_v1_chr16_-_50432421_50432504	0.801677	FOX{D1,D2}.p2	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr19_+_8816292_8816349	0.801475	FOX{D1,D2}.p2	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr14_+_32021497_32021503	0.801377	FOX{D1,D2}.p2	M29793|Tnnc1|21924|troponin C, cardiac/slow skeletal	NM_009393|Tnnc1|21924|troponin C, cardiac/slow skeletal	BC061172|Tnnc1|21924|troponin C, cardiac/slow skeletal
mm9_v1_chr10_-_59414516_59414582	0.797316	FOX{D1,D2}.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr4_+_48197852_48197907	0.797248	FOX{D1,D2}.p2	AK018158|Stx17|67727|syntaxin 17
mm9_v1_chr9_-_36540210_36540345	0.796113	FOX{D1,D2}.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr10_-_94878117_94878117	0.792643	FOX{D1,D2}.p2	NM_001168656|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr11_-_102268716_102268747	0.792273	FOX{D1,D2}.p2	BC115661|Slc25a39|68066|solute carrier family 25, member 39	BC115662|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr5_-_124315478_124315522	0.791337	FOX{D1,D2}.p2	BC120715|Niacr1|80885|niacin receptor 1	BC125296|Niacr1|80885|niacin receptor 1	AJ300198|Niacr1|80885|niacin receptor 1	AK150795|Niacr1|80885|niacin receptor 1	AK169956|Niacr1|80885|niacin receptor 1	NM_030701|Niacr1|80885|niacin receptor 1
mm9_v1_chr5_-_33560819_33560886	0.789047	FOX{D1,D2}.p2	BC017616|Spon2|100689|spondin 2, extracellular matrix protein	AK028987|Spon2|100689|spondin 2, extracellular matrix protein	AK042840|Spon2|100689|spondin 2, extracellular matrix protein	NM_133903|Spon2|100689|spondin 2, extracellular matrix protein
mm9_v1_chr17_-_46290499_46290503	0.784269	FOX{D1,D2}.p2	AK156569|Mad2l1bp|66591|MAD2L1 binding protein	NM_025649|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr2_-_3283840_3283862	0.78233	FOX{D1,D2}.p2	BC025001|Olah|99035|oleoyl-ACP hydrolase	NM_145921|Olah|99035|oleoyl-ACP hydrolase	AK087571|Olah|99035|oleoyl-ACP hydrolase
mm9_v1_chr1_+_24685556_24685610	0.777541	FOX{D1,D2}.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr6_-_113678282_113678406	0.77685	FOX{D1,D2}.p2	
mm9_v1_chr1_+_95405907_95405920	0.776693	FOX{D1,D2}.p2	
mm9_v1_chr7_-_31397445_31397492	0.772335	FOX{D1,D2}.p2	AF262335|Upk1a|109637|uroplakin 1A	AK004014|Upk1a|109637|uroplakin 1A	NM_026815|Upk1a|109637|uroplakin 1A
mm9_v1_chr5_+_28492235_28492251	0.771207	FOX{D1,D2}.p2	AK157766|En2|13799|engrailed 2	NM_010134|En2|13799|engrailed 2
mm9_v1_chr6_-_25759187_25759219	0.770161	FOX{D1,D2}.p2	BC016121|Pot1a|101185|protection of telomeres 1A	AK135346|Pot1a|101185|protection of telomeres 1A	AK137376|Pot1a|101185|protection of telomeres 1A	AK075661|Pot1a|101185|protection of telomeres 1A	AK085041|Pot1a|101185|protection of telomeres 1A	AK040864|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr5_-_109104394_109104400	0.767108	FOX{D1,D2}.p2	AK143528|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1
mm9_v1_chr11_-_32122259_32122296	0.767003	FOX{D1,D2}.p2	AK144437|Rhbdf1|13650|rhomboid family 1 (Drosophila)	NM_010117|Rhbdf1|13650|rhomboid family 1 (Drosophila)
mm9_v1_chr9_-_123760686_123760944	0.76375	FOX{D1,D2}.p2	AJ428065|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_148925|Fyco1|17281|FYVE and coiled-coil domain containing 1	BC053712|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr7_+_117916117_117916304	0.760349	FOX{D1,D2}.p2	BC040366|Ampd3|11717|adenosine monophosphate deaminase 3	NM_009667|Ampd3|11717|adenosine monophosphate deaminase 3	AK133465|Ampd3|11717|adenosine monophosphate deaminase 3	BC056380|Ampd3|11717|adenosine monophosphate deaminase 3	AK171276|Ampd3|11717|adenosine monophosphate deaminase 3
mm9_v1_chr7_-_139508762_139508845	0.760339	FOX{D1,D2}.p2	AK019474|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	BC031443|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	AK083614|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	NM_029935|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm9_v1_chr12_+_82047269_82047362	0.75575	FOX{D1,D2}.p2	AK088358|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr4_-_151235758_151235857	0.754707	FOX{D1,D2}.p2	AK076589|Camta1|100072|calmodulin binding transcription activator 1	BC150740|Camta1|100072|calmodulin binding transcription activator 1	AK034038|Camta1|100072|calmodulin binding transcription activator 1	AK144150|Camta1|100072|calmodulin binding transcription activator 1	AK009988|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr17_+_72022808_72022818	0.746484	FOX{D1,D2}.p2	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr6_-_39068241_39068254	0.746353	FOX{D1,D2}.p2	AK053205|Parp12|243771|poly (ADP-ribose) polymerase family, member 12	AK081528|Parp12|243771|poly (ADP-ribose) polymerase family, member 12
mm9_v1_chr9_-_99617685_99617685	0.745944	FOX{D1,D2}.p2	AF349451|Cldn18|56492|claudin 18	AF349453|Cldn18|56492|claudin 18	AK033657|Cldn18|56492|claudin 18	NM_001194921|Cldn18|56492|claudin 18	NM_001194923|Cldn18|56492|claudin 18
mm9_v1_chr12_+_9036802_9036858	0.744824	FOX{D1,D2}.p2	AK078146|Ttc32|75516|tetratricopeptide repeat domain 32	NM_029321|Ttc32|75516|tetratricopeptide repeat domain 32	AK005950|Ttc32|75516|tetratricopeptide repeat domain 32	BC119273|Ttc32|75516|tetratricopeptide repeat domain 32	AK144458|Ttc32|75516|tetratricopeptide repeat domain 32
mm9_v1_chr12_-_55796825_55796870	0.743929	FOX{D1,D2}.p2	NM_025456|Eapp|66266|E2F-associated phosphoprotein	BC037622|Eapp|66266|E2F-associated phosphoprotein	AK145027|Eapp|66266|E2F-associated phosphoprotein	AK145041|Eapp|66266|E2F-associated phosphoprotein
mm9_v1_chr13_+_42396844_42396991	0.743854	FOX{D1,D2}.p2	BC029547|Edn1|13614|endothelin 1	AK040778|Edn1|13614|endothelin 1	AK153437|Edn1|13614|endothelin 1	AK152647|Edn1|13614|endothelin 1
mm9_v1_chr7_+_116084192_116084237	0.74302	FOX{D1,D2}.p2	
mm9_v1_chr2_-_118375365_118375421	0.742656	FOX{D1,D2}.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr7_-_29383163_29383177	0.739792	FOX{D1,D2}.p2	BC048238|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr11_+_118884275_118884425	0.738193	FOX{D1,D2}.p2	X62537|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	BC035199|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	NM_007623|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	AK157869|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	Y13274|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)
mm9_v1_chrX_+_65931956_65932015	0.735428	FOX{D1,D2}.p2	AF461114|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK205186|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK208300|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr11_-_55233366_55233456	0.732835	FOX{D1,D2}.p2	AK049692|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK082283|Sparc|20692|secreted acidic cysteine rich glycoprotein	X04017|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK148670|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK161229|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK089114|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK159249|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr11_-_102268771_102268870	0.731593	FOX{D1,D2}.p2	AK160922|Slc25a39|68066|solute carrier family 25, member 39	AK007934|Slc25a39|68066|solute carrier family 25, member 39	AK002381|Slc25a39|68066|solute carrier family 25, member 39	AK010272|Slc25a39|68066|solute carrier family 25, member 39	AK007276|Slc25a39|68066|solute carrier family 25, member 39	AK084116|Slc25a39|68066|solute carrier family 25, member 39	AK161289|Slc25a39|68066|solute carrier family 25, member 39	AK019396|Slc25a39|68066|solute carrier family 25, member 39	AK078417|Slc25a39|68066|solute carrier family 25, member 39	NM_026542|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr1_+_157887985_157888091	0.726794	FOX{D1,D2}.p2	NM_001160181|Tor1aip2|240832|torsin A interacting protein 2	NM_022329|Tor1aip2|240832|torsin A interacting protein 2	AK152137|Tor1aip2|240832|torsin A interacting protein 2	AK080959|Tor1aip2|240832|torsin A interacting protein 2	AK150303|Tor1aip2|240832|torsin A interacting protein 2	AK151453|Tor1aip2|240832|torsin A interacting protein 2	AJ251363|Tor1aip2|240832|torsin A interacting protein 2	BC064017|Tor1aip2|240832|torsin A interacting protein 2	BC092059|Tor1aip2|240832|torsin A interacting protein 2	AK216254|Tor1aip2|240832|torsin A interacting protein 2	BC039927|Tor1aip2|240832|torsin A interacting protein 2	AK003852|Tor1aip2|240832|torsin A interacting protein 2	AK032697|Tor1aip2|240832|torsin A interacting protein 2	BC053726|Tor1aip2|240832|torsin A interacting protein 2	AK182358|Tor1aip2|240832|torsin A interacting protein 2	AK203799|Tor1aip2|240832|torsin A interacting protein 2	AK212068|Tor1aip2|240832|torsin A interacting protein 2	AK212760|Tor1aip2|240832|torsin A interacting protein 2	AK214292|Tor1aip2|240832|torsin A interacting protein 2	AK218632|Tor1aip2|240832|torsin A interacting protein 2	AK219881|Tor1aip2|240832|torsin A interacting protein 2	AK177027|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr5_+_73797316_73797488	0.725192	FOX{D1,D2}.p2	AK081976|Cwh43|231293|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)	NM_181323|Cwh43|231293|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)	AK035550|Cwh43|231293|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)	BC016523|Cwh43|231293|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)
mm9_v1_chr12_+_60230704_60230799	0.723457	FOX{D1,D2}.p2	NM_001165254|Ctage5|217615|CTAGE family, member 5	NM_146034|Ctage5|217615|CTAGE family, member 5	AK029466|Ctage5|217615|CTAGE family, member 5	AK080312|Ctage5|217615|CTAGE family, member 5	BC026864|Ctage5|217615|CTAGE family, member 5	AK087188|Ctage5|217615|CTAGE family, member 5	AK053010|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr18_+_61204798_61204855	0.723389	FOX{D1,D2}.p2	BC055311|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_001146268|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_008809|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK143247|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK134785|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr11_+_69906223_69906270	0.721005	FOX{D1,D2}.p2	X53042|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr4_-_153534748_153534817	0.720119	FOX{D1,D2}.p2	BC019544|Tprgl|67808|transformation related protein 63 regulated like	AK004777|Tprgl|67808|transformation related protein 63 regulated like	AK155413|Tprgl|67808|transformation related protein 63 regulated like	NM_026388|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr9_-_58097422_58097566	0.719376	FOX{D1,D2}.p2	AK193824|Pml|18854|promyelocytic leukemia	AK156054|Pml|18854|promyelocytic leukemia	AK157346|Pml|18854|promyelocytic leukemia	AK156279|Pml|18854|promyelocytic leukemia	U33626|Pml|18854|promyelocytic leukemia	AK156175|Pml|18854|promyelocytic leukemia	BC020990|Pml|18854|promyelocytic leukemia	AK137538|Pml|18854|promyelocytic leukemia	AK157035|Pml|18854|promyelocytic leukemia
mm9_v1_chrY_-_582062_582201	0.718582	FOX{D1,D2}.p2	AK162410|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK220463|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK155922|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AF057367|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	BC053061|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK043154|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	NM_009484|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142344|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142512|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm9_v1_chr11_-_11927973_11927973	0.718483	FOX{D1,D2}.p2	BC016111|Grb10|14783|growth factor receptor bound protein 10	NM_001177629|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr3_-_51129908_51129958	0.718176	FOX{D1,D2}.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr7_-_29383180_29383213	0.716478	FOX{D1,D2}.p2	AK129298|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4	NM_027470|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr5_+_32761610_32761706	0.713481	FOX{D1,D2}.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr4_+_134479504_134479540	0.70842	FOX{D1,D2}.p2	AK028145|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK003799|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK012363|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150024|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK160993|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169598|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169760|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	NM_023665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK029529|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr7_-_97278443_97278523	0.708397	FOX{D1,D2}.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr8_-_23235509_23235538	0.707262	FOX{D1,D2}.p2	AK165108|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	BC053516|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK032672|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	NM_177898|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK054168|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5
mm9_v1_chr3_+_5090275_5090294	0.702418	FOX{D1,D2}.p2	
mm9_v1_chr4_+_147320793_147320843	0.700009	FOX{D1,D2}.p2	AK183513|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK197606|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK209381|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr1_-_75138905_75138941	0.696445	FOX{D1,D2}.p2	BC028815|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK029090|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	NM_026977|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr19_+_23241546_23241602	0.695976	FOX{D1,D2}.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr11_-_4494790_4494809	0.69579	FOX{D1,D2}.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr4_+_104830022_104830255	0.691865	FOX{D1,D2}.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr11_+_3230733_3230843	0.689421	FOX{D1,D2}.p2	NM_178149|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK028419|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK029304|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK154842|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK005141|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK160300|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528081|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC055920|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC079641|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528078|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC028479|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1
mm9_v1_chr1_-_162083624_162083705	0.686193	FOX{D1,D2}.p2	AJ580920|Tnn|329278|tenascin N	BC138335|Tnn|329278|tenascin N	BC138336|Tnn|329278|tenascin N	AF455756|Tnn|329278|tenascin N	NM_177839|Tnn|329278|tenascin N
mm9_v1_chr3_-_144512249_144512265	0.686107	FOX{D1,D2}.p2	BC058766|Clca4|229927|chloride channel calcium activated 4	AY008277|Clca4|229927|chloride channel calcium activated 4	NM_139148|Clca4|229927|chloride channel calcium activated 4
mm9_v1_chr7_+_119167048_119167104	0.684194	FOX{D1,D2}.p2	AK082114|Usp47|74996|ubiquitin specific peptidase 47	BC108425|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chrX_-_43809499_43809524	0.682519	FOX{D1,D2}.p2	NM_001085510|Gm4987|245405|predicted gene 4987
mm9_v1_chr2_+_181572558_181572632	0.679412	FOX{D1,D2}.p2	AK031335|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	BC040385|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	NM_153594|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK146080|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AB182640|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK088800|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
mm9_v1_chr5_-_65324796_65324842	0.677234	FOX{D1,D2}.p2	AK143721|Tlr1|21897|toll-like receptor 1
mm9_v1_chr11_-_76592473_76592508	0.676248	FOX{D1,D2}.p2	AK052903|Cpd|12874|carboxypeptidase D
mm9_v1_chr18_+_67959756_67959787	0.673511	FOX{D1,D2}.p2	AK052420|Cep192|70799|centrosomal protein 192	NM_027556|Cep192|70799|centrosomal protein 192	AK089253|Cep192|70799|centrosomal protein 192	AK158414|Cep192|70799|centrosomal protein 192
mm9_v1_chr13_+_27288527_27288540	0.671744	FOX{D1,D2}.p2	AF150740|Prl3c1|27372|prolactin family 3, subfamily c, member 1	AF234637|Prl3c1|27372|prolactin family 3, subfamily c, member 1	NM_013766|Prl3c1|27372|prolactin family 3, subfamily c, member 1	AB019118|Prl3c1|27372|prolactin family 3, subfamily c, member 1	BC120576|Prl3c1|27372|prolactin family 3, subfamily c, member 1	BC120578|Prl3c1|27372|prolactin family 3, subfamily c, member 1
mm9_v1_chr2_+_101464874_101464960	0.6713	FOX{D1,D2}.p2	AK089075|Rag2|19374|recombination activating gene 2	AK031014|Rag2|19374|recombination activating gene 2	AK040375|Rag2|19374|recombination activating gene 2	NM_009020|Rag2|19374|recombination activating gene 2	BC120548|Rag2|19374|recombination activating gene 2	BC125473|Rag2|19374|recombination activating gene 2	BC144856|Rag2|19374|recombination activating gene 2	M64796|Rag2|19374|recombination activating gene 2
mm9_v1_chr15_-_37162666_37162676	0.670443	FOX{D1,D2}.p2	AK017454|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr6_-_122232849_122232899	0.663743	FOX{D1,D2}.p2	BC101953|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103546|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103547|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103548|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	AF097357|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	NM_016970|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	AJ010751|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1
mm9_v1_chr17_+_25023618_25023724	0.661663	FOX{D1,D2}.p2	NM_001163750|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	NM_001163751|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	BC072556|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK076170|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK082768|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK220234|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK156579|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK167474|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3
mm9_v1_chr14_+_124059330_124059403	0.661366	FOX{D1,D2}.p2	AK051773|Itgbl1|223272|integrin, beta-like 1	NM_145467|Itgbl1|223272|integrin, beta-like 1	BC020152|Itgbl1|223272|integrin, beta-like 1	AK029068|Itgbl1|223272|integrin, beta-like 1
mm9_v1_chr7_-_135039020_135039157	0.659348	FOX{D1,D2}.p2	AK008509|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK008578|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK002742|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	BC031732|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK013996|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK003237|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	NM_178600|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1
mm9_v1_chr17_-_46575402_46575425	0.657791	FOX{D1,D2}.p2	BC013474|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK143949|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK082865|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	NM_144856|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr9_+_89106018_89106027	0.656005	FOX{D1,D2}.p2	AK158264|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase	AK004092|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase	NM_026829|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase
mm9_v1_chr14_-_51490216_51490230	0.655238	FOX{D1,D2}.p2	U86137|Tep1|21745|telomerase associated protein 1	NM_009351|Tep1|21745|telomerase associated protein 1	BC082996|Tep1|21745|telomerase associated protein 1
mm9_v1_chr2_+_162757228_162757280	0.654955	FOX{D1,D2}.p2	NM_026499|Srsf6|67996|serine/arginine-rich splicing factor 6	AK004831|Srsf6|67996|serine/arginine-rich splicing factor 6	AK133872|Srsf6|67996|serine/arginine-rich splicing factor 6	AK171709|Srsf6|67996|serine/arginine-rich splicing factor 6	AK146293|Srsf6|67996|serine/arginine-rich splicing factor 6	AK159519|Srsf6|67996|serine/arginine-rich splicing factor 6	BC012039|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr3_-_106592919_106593066	0.653099	FOX{D1,D2}.p2	BC052905|Cd53|12508|CD53 antigen	AK160326|Cd53|12508|CD53 antigen	BC021310|Cd53|12508|CD53 antigen	AK156510|Cd53|12508|CD53 antigen	NM_007651|Cd53|12508|CD53 antigen
mm9_v1_chrX_+_104115963_104116162	0.648984	FOX{D1,D2}.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr15_-_78360039_78360054	0.643327	FOX{D1,D2}.p2	DQ002399|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	NM_028331|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC071187|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK154407|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chr12_-_70825804_70825839	0.639479	FOX{D1,D2}.p2	BC016226|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase	AK168429|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase	AK152450|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase
mm9_v1_chr19_-_39537540_39537568	0.639372	FOX{D1,D2}.p2	AF047725|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	AK050051|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	BC150721|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	NM_010002|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38
mm9_v1_chr19_-_5661634_5661648	0.638245	FOX{D1,D2}.p2	D11374|Sipa1|20469|signal-induced proliferation associated gene 1
mm9_v1_chr8_-_90886051_90886133	0.638118	FOX{D1,D2}.p2	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr4_-_49421014_49421022	0.636723	FOX{D1,D2}.p2	AK050357|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	AK050308|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	NM_145368|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2
mm9_v1_chr2_+_84890611_84890701	0.632874	FOX{D1,D2}.p2	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr16_+_23609986_23610176	0.632804	FOX{D1,D2}.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr4_-_34136995_34137041	0.629122	FOX{D1,D2}.p2	AK007270|Spaca1|67652|sperm acrosome associated 1	AK016011|Spaca1|67652|sperm acrosome associated 1	BC147079|Spaca1|67652|sperm acrosome associated 1	BC147080|Spaca1|67652|sperm acrosome associated 1	AK006187|Spaca1|67652|sperm acrosome associated 1	NM_026293|Spaca1|67652|sperm acrosome associated 1
mm9_v1_chr8_+_46593141_46593271	0.629052	FOX{D1,D2}.p2	AK171632|Sorbs2|234214|sorbin and SH3 domain containing 2	NM_172752|Sorbs2|234214|sorbin and SH3 domain containing 2	AK139388|Sorbs2|234214|sorbin and SH3 domain containing 2	BC151038|Sorbs2|234214|sorbin and SH3 domain containing 2	BC172140|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr5_+_32761471_32761527	0.628141	FOX{D1,D2}.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr8_-_124999921_124999977	0.62633	FOX{D1,D2}.p2	AK079883|Rnf166|68718|ring finger protein 166	BC131924|Rnf166|68718|ring finger protein 166	BC132281|Rnf166|68718|ring finger protein 166	AK151813|Rnf166|68718|ring finger protein 166	NM_001033142|Rnf166|68718|ring finger protein 166
mm9_v1_chr6_+_86992796_86992906	0.624716	FOX{D1,D2}.p2	AK087173|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	NM_013528|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK019852|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK039792|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC050762|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AF334736|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC010516|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr2_-_120911477_120911576	0.623973	FOX{D1,D2}.p2	BC116266|Tgm5|74176|transglutaminase 5	BC116267|Tgm5|74176|transglutaminase 5	AK009196|Tgm5|74176|transglutaminase 5	NM_028799|Tgm5|74176|transglutaminase 5	AK037074|Tgm5|74176|transglutaminase 5	AK079431|Tgm5|74176|transglutaminase 5	AK132482|Tgm5|74176|transglutaminase 5
mm9_v1_chr1_-_157883515_157883643	0.618784	FOX{D1,D2}.p2	AK149727|Tor1aip1|208263|torsin A interacting protein 1	AB251963|Tor1aip1|208263|torsin A interacting protein 1	NM_001160018|Tor1aip1|208263|torsin A interacting protein 1	NM_144791|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr3_+_65332306_65332400	0.618115	FOX{D1,D2}.p2	AK163347|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK162094|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	U55178|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK028529|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	NM_178892|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK032453|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK150248|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	BC068173|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase
mm9_v1_chr11_-_106649811_106649871	0.617243	FOX{D1,D2}.p2	AK132779|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr4_-_124742875_124742900	0.614276	FOX{D1,D2}.p2	BC118619|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	BC122552|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	AK077109|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	NM_175223|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1
mm9_v1_chr2_+_156698083_156698153	0.6113	FOX{D1,D2}.p2	AK184175|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK189929|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr5_+_87429884_87429898	0.607937	FOX{D1,D2}.p2	AK083294|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	NM_172881|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	BC113789|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	AK149501|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35
mm9_v1_chr13_+_36209724_36209798	0.607276	FOX{D1,D2}.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr8_+_86247034_86247066	0.604803	FOX{D1,D2}.p2	
mm9_v1_chr10_+_127691272_127691399	0.602555	FOX{D1,D2}.p2	BC022137|Apon|28194|apolipoprotein N	BC030734|Apon|28194|apolipoprotein N
mm9_v1_chr19_+_46782153_46782204	0.602361	FOX{D1,D2}.p2	AK009814|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr6_+_34334201_34334334	0.600961	FOX{D1,D2}.p2	AK075865|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	NM_172398|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	BC026843|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK087002|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK082777|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK019906|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK169490|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)
mm9_v1_chr9_-_20325813_20325863	0.59558	FOX{D1,D2}.p2	BC048701|Zfp266|77519|zinc finger protein 266	BC061209|Zfp266|77519|zinc finger protein 266	AK081787|Zfp266|77519|zinc finger protein 266	AK019992|Zfp266|77519|zinc finger protein 266	BC089552|Zfp266|77519|zinc finger protein 266	NM_001082485|Zfp266|77519|zinc finger protein 266	NM_001135019|Zfp266|77519|zinc finger protein 266
mm9_v1_chr3_-_100773571_100773587	0.593501	FOX{D1,D2}.p2	BC096625|Ttf2|74044|transcription termination factor, RNA polymerase II	AK014607|Ttf2|74044|transcription termination factor, RNA polymerase II	BC087733|Ttf2|74044|transcription termination factor, RNA polymerase II	AK078759|Ttf2|74044|transcription termination factor, RNA polymerase II	AK087352|Ttf2|74044|transcription termination factor, RNA polymerase II	NM_001013026|Ttf2|74044|transcription termination factor, RNA polymerase II
mm9_v1_chr3_-_81779636_81779675	0.588256	FOX{D1,D2}.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr5_-_109104366_109104390	0.584743	FOX{D1,D2}.p2	AK085280|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1	BC032151|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1	AK128888|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1
mm9_v1_chr7_-_134170532_134170710	0.584633	FOX{D1,D2}.p2	BC004758|Maz|17188|MYC-associated zinc finger protein (purine-binding transcription factor)
mm9_v1_chr3_+_102799653_102799657	0.584612	FOX{D1,D2}.p2	AK014247|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr1_+_169298077_169298107	0.580943	FOX{D1,D2}.p2	AK208220|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr4_-_129318264_129318285	0.577765	FOX{D1,D2}.p2	AK150240|Txlna|109658|taxilin alpha	AK161649|Txlna|109658|taxilin alpha	AK171101|Txlna|109658|taxilin alpha	AK078192|Txlna|109658|taxilin alpha
mm9_v1_chr19_+_34175422_34175462	0.577638	FOX{D1,D2}.p2	AK019504|Lipm|78753|lipase, family member M	AK037091|Lipm|78753|lipase, family member M	NM_023903|Lipm|78753|lipase, family member M	AK037214|Lipm|78753|lipase, family member M	AK085719|Lipm|78753|lipase, family member M	BC031933|Lipm|78753|lipase, family member M
mm9_v1_chr11_-_59850365_59850382	0.575031	FOX{D1,D2}.p2	AY334571|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chr16_-_57754816_57754849	0.570023	FOX{D1,D2}.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr5_-_52541869_52541943	0.568589	FOX{D1,D2}.p2	AK208682|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr3_+_146162758_146162924	0.568434	FOX{D1,D2}.p2	NM_010318|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5	BC002316|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5	BC010725|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5	BC087872|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5	AK146065|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5	U38498|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5
mm9_v1_chr8_+_113580224_113580286	0.566393	FOX{D1,D2}.p2	AK012102|Exosc6|72544|exosome component 6	AK088532|Exosc6|72544|exosome component 6	BC116985|Exosc6|72544|exosome component 6	BC119082|Exosc6|72544|exosome component 6	NM_028274|Exosc6|72544|exosome component 6
mm9_v1_chr15_+_54242324_54242328	0.565363	FOX{D1,D2}.p2	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr8_+_131028275_131028322	0.564783	FOX{D1,D2}.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chr15_+_99409485_99409583	0.563987	FOX{D1,D2}.p2	AK002689|Aqp2|11827|aquaporin 2	AK142567|Aqp2|11827|aquaporin 2	NM_009699|Aqp2|11827|aquaporin 2	BC019966|Aqp2|11827|aquaporin 2	AF020519|Aqp2|11827|aquaporin 2
mm9_v1_chr2_+_148221133_148221148	0.562494	FOX{D1,D2}.p2	BC138487|Sstr4|20608|somatostatin receptor 4	BC138488|Sstr4|20608|somatostatin receptor 4
mm9_v1_chr14_-_103498719_103498784	0.560131	FOX{D1,D2}.p2	AK142007|Fbxl3|50789|F-box and leucine-rich repeat protein 3	NM_015822|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080863|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080802|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chr2_+_145647868_145648056	0.559894	FOX{D1,D2}.p2	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr7_-_29383178_29383179	0.55907	FOX{D1,D2}.p2	AK088512|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr6_-_52190771_52190869	0.558212	FOX{D1,D2}.p2	L08758|Hoxa10|15395|homeobox A10	NM_001122950|Hoxa10|15395|homeobox A10
mm9_v1_chr8_-_122082604_122082665	0.556615	FOX{D1,D2}.p2	AK147336|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC011533|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC057198|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK029048|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK147495|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_001167910|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_019709|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr13_+_23625779_23625779	0.556276	FOX{D1,D2}.p2	BC125011|Hist1h2af|319173|histone cluster 1, H2af	NM_175661|Hist1h2af|319173|histone cluster 1, H2af
mm9_v1_chr8_+_36740640_36740782	0.55509	FOX{D1,D2}.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr5_+_125029125_125029191	0.554946	FOX{D1,D2}.p2	NM_181410|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	AK050227|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	BC017515|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	AK133941|Gtf2h3|209357|general transcription factor IIH, polypeptide 3
mm9_v1_chr15_-_79363346_79363346	0.554772	FOX{D1,D2}.p2	NM_152806|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr3_-_144695718_144695741	0.55212	FOX{D1,D2}.p2	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr11_+_97660946_97661134	0.550423	FOX{D1,D2}.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr3_+_157610182_157610429	0.550091	FOX{D1,D2}.p2	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr11_-_55209320_55209338	0.550005	FOX{D1,D2}.p2	AK192259|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr5_-_122017937_122018000	0.545959	FOX{D1,D2}.p2	
mm9_v1_chr4_-_96330818_96330832	0.544738	FOX{D1,D2}.p2	AK165404|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr8_-_42502362_42502487	0.544205	FOX{D1,D2}.p2	AK079229|Frg1|14300|FSHD region gene 1	AK077107|Frg1|14300|FSHD region gene 1	BC002027|Frg1|14300|FSHD region gene 1	U62105|Frg1|14300|FSHD region gene 1	NM_013522|Frg1|14300|FSHD region gene 1
mm9_v1_chr19_+_53403902_53404133	0.541723	FOX{D1,D2}.p2	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr5_+_31350991_31351042	0.536891	FOX{D1,D2}.p2	NM_027855|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151307|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151366|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC049637|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AB009018|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK002276|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK169267|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC057097|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene
mm9_v1_chr10_+_126415772_126415772	0.536474	FOX{D1,D2}.p2	BC085142|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_001113470|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr10_+_18189773_18189786	0.536368	FOX{D1,D2}.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr4_-_6917628_6917956	0.535776	FOX{D1,D2}.p2	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr12_-_57636046_57636092	0.533909	FOX{D1,D2}.p2	AB221567|Nkx2-1|21869|NK2 homeobox 1	NM_001146198|Nkx2-1|21869|NK2 homeobox 1
mm9_v1_chr9_-_20619426_20619525	0.533106	FOX{D1,D2}.p2	BC024367|Col5a3|53867|collagen, type V, alpha 3	BC138417|Col5a3|53867|collagen, type V, alpha 3	BC138419|Col5a3|53867|collagen, type V, alpha 3	BC145269|Col5a3|53867|collagen, type V, alpha 3	AF176645|Col5a3|53867|collagen, type V, alpha 3	NM_016919|Col5a3|53867|collagen, type V, alpha 3	AB040491|Col5a3|53867|collagen, type V, alpha 3
mm9_v1_chr1_+_89346303_89346444	0.533089	FOX{D1,D2}.p2	AK044009|Gigyf2|227331|GRB10 interacting GYF protein 2
mm9_v1_chr12_+_85350438_85350464	0.532079	FOX{D1,D2}.p2	AK053680|Acot1|26897|acyl-CoA thioesterase 1	BC028261|Acot1|26897|acyl-CoA thioesterase 1	NM_012006|Acot1|26897|acyl-CoA thioesterase 1	Y14004|Acot1|26897|acyl-CoA thioesterase 1	BC003911|Acot1|26897|acyl-CoA thioesterase 1
mm9_v1_chr3_-_94863548_94863564	0.527007	FOX{D1,D2}.p2	AK052310|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr1_-_163748523_163748605	0.52635	FOX{D1,D2}.p2	AK033720|AI848100|226551|expressed sequence AI848100
mm9_v1_chr11_+_87551052_87551101	0.525625	FOX{D1,D2}.p2	AK146235|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK168229|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK167941|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK002990|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC061174|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_009296|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC024391|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC087923|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43154|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)
mm9_v1_chr4_+_128688217_128688363	0.524648	FOX{D1,D2}.p2	
mm9_v1_chr1_-_197002841_197002908	0.523389	FOX{D1,D2}.p2	BC109344|Cr2|12902|complement receptor 2	BC109345|Cr2|12902|complement receptor 2	AK003072|Cr2|12902|complement receptor 2	NM_007758|Cr2|12902|complement receptor 2
mm9_v1_chr1_-_158869401_158869517	0.523375	FOX{D1,D2}.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr19_+_38911056_38911166	0.523002	FOX{D1,D2}.p2	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr4_+_99322989_99322989	0.521022	FOX{D1,D2}.p2	AF067421|Foxd3|15221|forkhead box D3	NM_010425|Foxd3|15221|forkhead box D3	U41047|Foxd3|15221|forkhead box D3
mm9_v1_chr6_-_39156609_39156661	0.520981	FOX{D1,D2}.p2	AK136209|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145216|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145848|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr9_-_37519864_37519864	0.520097	FOX{D1,D2}.p2	BC130240|Olfr160|80706|olfactory receptor 160	NM_030553|Olfr160|80706|olfactory receptor 160
mm9_v1_chr15_+_58731646_58731691	0.520057	FOX{D1,D2}.p2	AK016137|Rnf139|75841|ring finger protein 139
mm9_v1_chr19_+_8815893_8816001	0.51882	FOX{D1,D2}.p2	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr17_-_46290473_46290486	0.518169	FOX{D1,D2}.p2	AK002377|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr9_-_88614635_88614635	0.515607	FOX{D1,D2}.p2	NM_001128601|Gm2382|100039707|predicted gene 2382
mm9_v1_chr3_-_89856250_89856452	0.515499	FOX{D1,D2}.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr5_-_109104347_109104356	0.514228	FOX{D1,D2}.p2	BC022130|Slc26a1|231583|solute carrier family 26 (sulfate transporter), member 1
mm9_v1_chr8_+_73988823_73988883	0.514016	FOX{D1,D2}.p2	NM_053162|Mrpl34|94065|mitochondrial ribosomal protein L34	BC052086|Mrpl34|94065|mitochondrial ribosomal protein L34	AB049653|Mrpl34|94065|mitochondrial ribosomal protein L34	BC056979|Mrpl34|94065|mitochondrial ribosomal protein L34	AK018724|Mrpl34|94065|mitochondrial ribosomal protein L34	AK170156|Mrpl34|94065|mitochondrial ribosomal protein L34
mm9_v1_chr6_-_25759225_25759245	0.512509	FOX{D1,D2}.p2	AK036052|Pot1a|101185|protection of telomeres 1A	NM_133931|Pot1a|101185|protection of telomeres 1A	AK005318|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr1_+_189039382_189039433	0.512506	FOX{D1,D2}.p2	AK167826|Gpatch2|67769|G patch domain containing 2	AK169660|Gpatch2|67769|G patch domain containing 2	NM_026367|Gpatch2|67769|G patch domain containing 2	AK053781|Gpatch2|67769|G patch domain containing 2	AK011727|Gpatch2|67769|G patch domain containing 2	AK029990|Gpatch2|67769|G patch domain containing 2	AK032734|Gpatch2|67769|G patch domain containing 2	BC054810|Gpatch2|67769|G patch domain containing 2	AK017975|Gpatch2|67769|G patch domain containing 2
mm9_v1_chr8_-_109407905_109408045	0.51137	FOX{D1,D2}.p2	AK193837|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chrX_+_98835386_98835624	0.508366	FOX{D1,D2}.p2	AK076418|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_139144|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AK163296|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC025097|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC057319|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC037194|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC055851|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AF363030|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr4_+_138281239_138281239	0.50819	FOX{D1,D2}.p2	NM_008868|Pla2g2c|18781|phospholipase A2, group IIC
mm9_v1_chr6_+_42211957_42211968	0.507823	FOX{D1,D2}.p2	AK053212|Tmem139|109218|transmembrane protein 139	NM_175408|Tmem139|109218|transmembrane protein 139
mm9_v1_chr7_-_149482973_149482973	0.50769	FOX{D1,D2}.p2	BC104355|Krtap5-1|50774|keratin associated protein 5-1	NM_015808|Krtap5-1|50774|keratin associated protein 5-1
mm9_v1_chr4_-_138281116_138281156	0.507549	FOX{D1,D2}.p2	AK045964|Ubxn10|212190|UBX domain protein 10	AK161296|Ubxn10|212190|UBX domain protein 10	AK080662|Ubxn10|212190|UBX domain protein 10
mm9_v1_chr15_+_28133520_28133520	0.506606	FOX{D1,D2}.p2	AF466704|Dnahc5|110082|dynein, axonemal, heavy chain 5	AK054152|Dnahc5|110082|dynein, axonemal, heavy chain 5	NM_133365|Dnahc5|110082|dynein, axonemal, heavy chain 5
mm9_v1_chr14_-_58017351_58017365	0.505547	FOX{D1,D2}.p2	AF351609|Cryl1|68631|crystallin, lambda 1	AK003913|Cryl1|68631|crystallin, lambda 1	AK043569|Cryl1|68631|crystallin, lambda 1
mm9_v1_chr3_+_102799658_102799677	0.505276	FOX{D1,D2}.p2	AK014113|Sike1|66641|suppressor of IKBKE 1	AK033553|Sike1|66641|suppressor of IKBKE 1	NM_025679|Sike1|66641|suppressor of IKBKE 1	AK017452|Sike1|66641|suppressor of IKBKE 1	AK017694|Sike1|66641|suppressor of IKBKE 1	BC004090|Sike1|66641|suppressor of IKBKE 1	AK019264|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr15_-_100518324_100518351	0.50413	FOX{D1,D2}.p2	BC011218|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007931|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007392|Cela1|109901|chymotrypsin-like elastase family, member 1	NM_033612|Cela1|109901|chymotrypsin-like elastase family, member 1
mm9_v1_chr19_-_45309725_45309963	0.504024	FOX{D1,D2}.p2	AB108497|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	NM_010691|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	BC119177|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	BC120586|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)
mm9_v1_chr6_-_52590285_52590317	0.502924	FOX{D1,D2}.p2	BC003914|Hibadh|58875|3-hydroxyisobutyrate dehydrogenase	NM_145567|Hibadh|58875|3-hydroxyisobutyrate dehydrogenase
mm9_v1_chr6_-_123368078_123368078	0.502256	FOX{D1,D2}.p2	NM_001104634|Vmn2r20|667180|vomeronasal 2, receptor 20
mm9_v1_chr4_-_116666956_116667029	0.500875	FOX{D1,D2}.p2	AK002844|Urod|22275|uroporphyrinogen decarboxylase	AK007470|Urod|22275|uroporphyrinogen decarboxylase	AK135090|Urod|22275|uroporphyrinogen decarboxylase	BC008109|Urod|22275|uroporphyrinogen decarboxylase	NM_009478|Urod|22275|uroporphyrinogen decarboxylase	AK172426|Urod|22275|uroporphyrinogen decarboxylase
mm9_v1_chr17_-_24833089_24833122	0.494221	FOX{D1,D2}.p2	BC023941|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	AK146579|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	NM_023040|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm9_v1_chr7_+_28376578_28376874	0.493986	FOX{D1,D2}.p2	AK158792|Akt2|11652|thymoma viral proto-oncogene 2	NM_001110208|Akt2|11652|thymoma viral proto-oncogene 2	AK144217|Akt2|11652|thymoma viral proto-oncogene 2	U22445|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr3_+_53959956_53960294	0.493184	FOX{D1,D2}.p2	AK084109|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK080670|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK084139|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	NM_016984|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50921|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50922|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC120729|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC131915|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK044265|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF190646|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF011543|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF019663|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK049788|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4
mm9_v1_chr5_+_119010687_119010751	0.492879	FOX{D1,D2}.p2	AK088795|Med13l|76199|mediator complex subunit 13-like	NM_172424|Med13l|76199|mediator complex subunit 13-like	AK154895|Med13l|76199|mediator complex subunit 13-like	AY338464|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr13_-_31911790_31911820	0.492514	FOX{D1,D2}.p2	
mm9_v1_chr11_+_49607656_49607690	0.486802	FOX{D1,D2}.p2	NM_013529|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	AK053670|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	BC031928|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	AB016780|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2
mm9_v1_chr10_+_19432392_19432408	0.482747	FOX{D1,D2}.p2	AK054215|Il20ra|237313|interleukin 20 receptor, alpha	NM_172786|Il20ra|237313|interleukin 20 receptor, alpha	BC056628|Il20ra|237313|interleukin 20 receptor, alpha
mm9_v1_chr4_-_117169519_117169656	0.477174	FOX{D1,D2}.p2	BC056359|Rnf220|66743|ring finger protein 220	BC058415|Rnf220|66743|ring finger protein 220	NM_025739|Rnf220|66743|ring finger protein 220	AK028975|Rnf220|66743|ring finger protein 220	AK041785|Rnf220|66743|ring finger protein 220
mm9_v1_chr15_+_37162790_37162813	0.477019	FOX{D1,D2}.p2	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr18_-_36829750_36829972	0.475987	FOX{D1,D2}.p2	AF092039|Sra1|24068|steroid receptor RNA activator 1	AK136702|Sra1|24068|steroid receptor RNA activator 1	AK154232|Sra1|24068|steroid receptor RNA activator 1	BC048362|Sra1|24068|steroid receptor RNA activator 1	AK007302|Sra1|24068|steroid receptor RNA activator 1	AK010375|Sra1|24068|steroid receptor RNA activator 1	NM_001164406|Sra1|24068|steroid receptor RNA activator 1	NM_025291|Sra1|24068|steroid receptor RNA activator 1
mm9_v1_chr15_-_78359994_78360032	0.475646	FOX{D1,D2}.p2	AK051058|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC025489|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK012868|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chr11_-_5442157_5442220	0.473166	FOX{D1,D2}.p2	BC034558|Ccdc117|104479|coiled-coil domain containing 117	BC059888|Ccdc117|104479|coiled-coil domain containing 117	BC018601|Ccdc117|104479|coiled-coil domain containing 117	NM_134033|Ccdc117|104479|coiled-coil domain containing 117
mm9_v1_chr17_+_47928985_47929151	0.472676	FOX{D1,D2}.p2	
mm9_v1_chr17_-_36779586_36779610	0.472323	FOX{D1,D2}.p2	BC106996|H2-M9|14997|histocompatibility 2, M region locus 9	AF469488|H2-M9|14997|histocompatibility 2, M region locus 9	AF539595|H2-M9|14997|histocompatibility 2, M region locus 9	NM_008205|H2-M9|14997|histocompatibility 2, M region locus 9	AK080256|H2-M9|14997|histocompatibility 2, M region locus 9
mm9_v1_chr2_-_79969429_79969614	0.470559	FOX{D1,D2}.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr11_-_79337178_79337240	0.470095	FOX{D1,D2}.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr16_-_22857557_22857644	0.469973	FOX{D1,D2}.p2	AK133804|Tbccd1|70573|TBCC domain containing 1	BC082558|Tbccd1|70573|TBCC domain containing 1	AK039905|Tbccd1|70573|TBCC domain containing 1	AK040787|Tbccd1|70573|TBCC domain containing 1	AK043059|Tbccd1|70573|TBCC domain containing 1	AK035909|Tbccd1|70573|TBCC domain containing 1	AK017705|Tbccd1|70573|TBCC domain containing 1	NM_001081368|Tbccd1|70573|TBCC domain containing 1
mm9_v1_chr7_+_111392998_111393087	0.46905	FOX{D1,D2}.p2	AK171840|Trim34a|94094|tripartite motif-containing 34A	AK172135|Trim34a|94094|tripartite motif-containing 34A	AF220139|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chr10_-_78180902_78181043	0.468784	FOX{D1,D2}.p2	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr11_-_55233339_55233353	0.468425	FOX{D1,D2}.p2	AK003162|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK133377|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK139473|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK146935|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr7_-_97129450_97129518	0.468345	FOX{D1,D2}.p2	BC012966|Eed|13626|embryonic ectoderm development	U78103|Eed|13626|embryonic ectoderm development	NM_021876|Eed|13626|embryonic ectoderm development	U97675|Eed|13626|embryonic ectoderm development
mm9_v1_chr9_-_89594389_89594428	0.468012	FOX{D1,D2}.p2	AK208137|Tmed3|66111|transmembrane emp24 domain containing 3	AK211505|Tmed3|66111|transmembrane emp24 domain containing 3	AK212102|Tmed3|66111|transmembrane emp24 domain containing 3	AK217166|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr5_+_123093892_123094082	0.467508	FOX{D1,D2}.p2	AK144585|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038839|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038845|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038887|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_011027|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK171132|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC062808|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC141120|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145211|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145050|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ009823|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489296|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489297|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128303|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128304|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7
mm9_v1_chr10_+_3134299_3134312	0.465045	FOX{D1,D2}.p2	AK033015|Cnksr3|215748|Cnksr family member 3	NM_172546|Cnksr3|215748|Cnksr family member 3
mm9_v1_chr15_-_3945704_3945774	0.464131	FOX{D1,D2}.p2	AK045350|AW549877|106064|expressed sequence AW549877	AK154940|AW549877|106064|expressed sequence AW549877	NM_145930|AW549877|106064|expressed sequence AW549877
mm9_v1_chr6_-_51416921_51416984	0.463398	FOX{D1,D2}.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr11_-_96777696_96777844	0.461943	FOX{D1,D2}.p2	AK153951|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK077853|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	BC002318|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	NM_030248|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075791|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK165494|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075771|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK050014|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK149765|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK166476|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3
mm9_v1_chr6_-_114871769_114871855	0.461098	FOX{D1,D2}.p2	BC048841|Vgll4|232334|vestigial like 4 (Drosophila)	NM_177683|Vgll4|232334|vestigial like 4 (Drosophila)	BC060305|Vgll4|232334|vestigial like 4 (Drosophila)	AK144447|Vgll4|232334|vestigial like 4 (Drosophila)	AK078466|Vgll4|232334|vestigial like 4 (Drosophila)
mm9_v1_chr6_+_124780226_124780272	0.460602	FOX{D1,D2}.p2	AK008606|Cdca3|14793|cell division cycle associated 3	AK169792|Cdca3|14793|cell division cycle associated 3	AK010409|Cdca3|14793|cell division cycle associated 3	AK028159|Cdca3|14793|cell division cycle associated 3	AK145537|Cdca3|14793|cell division cycle associated 3	BC002006|Cdca3|14793|cell division cycle associated 3	BC027172|Cdca3|14793|cell division cycle associated 3
mm9_v1_chr8_+_34887177_34887229	0.460284	FOX{D1,D2}.p2	AK178391|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr15_-_101381089_101381097	0.460013	FOX{D1,D2}.p2	BC108971|Krt82|114566|keratin 82	NM_053249|Krt82|114566|keratin 82	AY028606|Krt82|114566|keratin 82
mm9_v1_chr3_-_53267127_53267244	0.458612	FOX{D1,D2}.p2	AK133986|Nhlrc3|212114|NHL repeat containing 3	BC087903|Nhlrc3|212114|NHL repeat containing 3	BC107356|Nhlrc3|212114|NHL repeat containing 3	AK029465|Nhlrc3|212114|NHL repeat containing 3	AK033167|Nhlrc3|212114|NHL repeat containing 3	NM_172501|Nhlrc3|212114|NHL repeat containing 3	AK162824|Nhlrc3|212114|NHL repeat containing 3	AK220477|Nhlrc3|212114|NHL repeat containing 3
mm9_v1_chr9_+_122076647_122076688	0.457556	FOX{D1,D2}.p2	
mm9_v1_chr4_+_8533630_8533662	0.456015	FOX{D1,D2}.p2	AK213817|Rab2a|59021|RAB2A, member RAS oncogene family	AK218701|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr11_+_114713196_114713368	0.453854	FOX{D1,D2}.p2	NM_147217|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C	BC031439|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C
mm9_v1_chr17_-_18020889_18020919	0.453486	FOX{D1,D2}.p2	NM_013521|Fpr1|14293|formyl peptide receptor 1	AK137714|Fpr1|14293|formyl peptide receptor 1
mm9_v1_chr2_-_21126852_21126991	0.452224	FOX{D1,D2}.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr10_+_41607235_41607307	0.449655	FOX{D1,D2}.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr12_+_106801381_106801438	0.448576	FOX{D1,D2}.p2	NM_009747|Bdkrb2|12062|bradykinin receptor, beta 2	X78438|Bdkrb2|12062|bradykinin receptor, beta 2	X69682|Bdkrb2|12062|bradykinin receptor, beta 2	AK132469|Bdkrb2|12062|bradykinin receptor, beta 2	BC137755|Bdkrb2|12062|bradykinin receptor, beta 2	BC137756|Bdkrb2|12062|bradykinin receptor, beta 2
mm9_v1_chr3_+_28704357_28704400	0.446422	FOX{D1,D2}.p2	BC120716|Rpl22l1|68028|ribosomal protein L22 like 1	BC120718|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr4_+_135242371_135242456	0.443717	FOX{D1,D2}.p2	AK141338|Il28ra|242700|interleukin 28 receptor alpha	NM_174851|Il28ra|242700|interleukin 28 receptor alpha	BC057856|Il28ra|242700|interleukin 28 receptor alpha	AY184376|Il28ra|242700|interleukin 28 receptor alpha
mm9_v1_chr11_+_54251680_54251744	0.443138	FOX{D1,D2}.p2	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr1_-_154725297_154725297	0.442703	FOX{D1,D2}.p2	AK129101|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001160257|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr9_+_72833379_72833456	0.440839	FOX{D1,D2}.p2	AK076325|Ccpg1|72278|cell cycle progression 1	AK128894|Ccpg1|72278|cell cycle progression 1	AK148864|Ccpg1|72278|cell cycle progression 1	BC082602|Ccpg1|72278|cell cycle progression 1	BC043049|Ccpg1|72278|cell cycle progression 1	AK007973|Ccpg1|72278|cell cycle progression 1	AK134675|Ccpg1|72278|cell cycle progression 1	AK032645|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr14_-_37748753_37748753	0.439879	FOX{D1,D2}.p2	AK005931|Gcap14|72972|granule cell antiserum positive 14	BC048641|Gcap14|72972|granule cell antiserum positive 14	BC060947|Gcap14|72972|granule cell antiserum positive 14	NM_028407|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr3_+_129581477_129581610	0.438225	FOX{D1,D2}.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr16_+_32271553_32271694	0.438073	FOX{D1,D2}.p2	AK009281|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene	NM_183283|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene
mm9_v1_chr1_-_141456740_141456821	0.43676	FOX{D1,D2}.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr11_-_4494815_4494822	0.436307	FOX{D1,D2}.p2	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr9_-_77391865_77391878	0.431983	FOX{D1,D2}.p2	AK082721|Lrrc1|214345|leucine rich repeat containing 1	NM_172528|Lrrc1|214345|leucine rich repeat containing 1	AK053293|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr9_+_51856117_51856219	0.426505	FOX{D1,D2}.p2	BC034438|Rdx|19684|radixin
mm9_v1_chr3_+_27883092_27883235	0.426389	FOX{D1,D2}.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr14_-_66627993_66628046	0.425806	FOX{D1,D2}.p2	BC019856|Gulo|268756|gulonolactone (L-) oxidase	BC028822|Gulo|268756|gulonolactone (L-) oxidase	BC028828|Gulo|268756|gulonolactone (L-) oxidase	AK167460|Gulo|268756|gulonolactone (L-) oxidase	AK077740|Gulo|268756|gulonolactone (L-) oxidase	NM_178747|Gulo|268756|gulonolactone (L-) oxidase
mm9_v1_chr19_-_17912073_17912162	0.423716	FOX{D1,D2}.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr1_-_187153212_187153265	0.419214	FOX{D1,D2}.p2	AK164435|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK051778|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK088965|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK036182|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK008042|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043729|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	BC052403|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK050358|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK166832|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr11_+_33947115_33947287	0.417331	FOX{D1,D2}.p2	AK036727|Lcp2|16822|lymphocyte cytosolic protein 2	AK037970|Lcp2|16822|lymphocyte cytosolic protein 2	U20159|Lcp2|16822|lymphocyte cytosolic protein 2	AK168134|Lcp2|16822|lymphocyte cytosolic protein 2	AK153374|Lcp2|16822|lymphocyte cytosolic protein 2	BC006948|Lcp2|16822|lymphocyte cytosolic protein 2	NM_010696|Lcp2|16822|lymphocyte cytosolic protein 2
mm9_v1_chr1_+_192752368_192752423	0.416132	FOX{D1,D2}.p2	AK158731|Angel2|52477|angel homolog 2 (Drosophila)	NM_021421|Angel2|52477|angel homolog 2 (Drosophila)	AK077039|Angel2|52477|angel homolog 2 (Drosophila)	AB041602|Angel2|52477|angel homolog 2 (Drosophila)	AK017545|Angel2|52477|angel homolog 2 (Drosophila)	BC024907|Angel2|52477|angel homolog 2 (Drosophila)
mm9_v1_chr3_+_89862664_89862687	0.415153	FOX{D1,D2}.p2	BC022598|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr5_+_43907004_43907024	0.415047	FOX{D1,D2}.p2	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr11_-_58977197_58977301	0.41453	FOX{D1,D2}.p2	AK172525|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK038625|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK133203|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	NM_173785|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	BC094909|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene
mm9_v1_chr7_-_72516109_72516162	0.412619	FOX{D1,D2}.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr5_+_122855939_122855963	0.411047	FOX{D1,D2}.p2	AK207142|Arpc3|56378|actin related protein 2/3 complex, subunit 3
mm9_v1_chr10_+_97106701_97106701	0.410762	FOX{D1,D2}.p2	AK005684|Epyc|13516|epiphycan	AK015223|Epyc|13516|epiphycan	NM_007884|Epyc|13516|epiphycan
mm9_v1_chr15_+_100183579_100183639	0.410119	FOX{D1,D2}.p2	AB110950|Higd1c|380975|HIG1 domain family, member 1C	BC139180|AB099516|554292|cDNA sequence AB099516	BC139182|AB099516|554292|cDNA sequence AB099516	BC145570|AB099516|554292|cDNA sequence AB099516	AK143923|Mettl7a2|393082|methyltransferase like 7A2	AK144032|AB099516|554292|cDNA sequence AB099516	BC087869|Mettl7a2|393082|methyltransferase like 7A2	BC090971|Mettl7a2|393082|methyltransferase like 7A2	NM_001024672|AB099516|554292|cDNA sequence AB099516	NM_199477|Mettl7a2|393082|methyltransferase like 7A2	AB253944|Mettl7a2|393082|methyltransferase like 7A2
mm9_v1_chr17_-_56416148_56416230	0.409897	FOX{D1,D2}.p2	AK054219|Ticam1|106759|toll-like receptor adaptor molecule 1	AK089679|Ticam1|106759|toll-like receptor adaptor molecule 1	AK083836|Ticam1|106759|toll-like receptor adaptor molecule 1	AK086237|Ticam1|106759|toll-like receptor adaptor molecule 1	BC037048|Ticam1|106759|toll-like receptor adaptor molecule 1	AK155906|Ticam1|106759|toll-like receptor adaptor molecule 1	AK171578|Ticam1|106759|toll-like receptor adaptor molecule 1	AK143766|Ticam1|106759|toll-like receptor adaptor molecule 1	AK150150|Ticam1|106759|toll-like receptor adaptor molecule 1	AK155245|Ticam1|106759|toll-like receptor adaptor molecule 1	NM_174989|Ticam1|106759|toll-like receptor adaptor molecule 1
mm9_v1_chr1_+_70772288_70772496	0.408259	FOX{D1,D2}.p2	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chr1_+_82313187_82313198	0.40599	FOX{D1,D2}.p2	AK079448|Rhbdd1|76867|rhomboid domain containing 1	AK161153|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr17_+_3115197_3115372	0.405144	FOX{D1,D2}.p2	AK171078|Scaf8|106583|SR-related CTD-associated factor 8	AK050652|Scaf8|106583|SR-related CTD-associated factor 8	BC038363|Scaf8|106583|SR-related CTD-associated factor 8	AK207242|Scaf8|106583|SR-related CTD-associated factor 8	AK211575|Scaf8|106583|SR-related CTD-associated factor 8	AK213588|Scaf8|106583|SR-related CTD-associated factor 8	AK213688|Scaf8|106583|SR-related CTD-associated factor 8	AK218304|Scaf8|106583|SR-related CTD-associated factor 8	AK215751|Scaf8|106583|SR-related CTD-associated factor 8
mm9_v1_chr19_+_21354915_21354945	0.404019	FOX{D1,D2}.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr5_+_3928177_3928370	0.401738	FOX{D1,D2}.p2	AK031740|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	NM_194462|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK168404|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK008727|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK017707|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AJ582913|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK080442|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9
mm9_v1_chr11_+_70461024_70461106	0.400748	FOX{D1,D2}.p2	AK075579|Rnf167|70510|ring finger protein 167	BC010777|Rnf167|70510|ring finger protein 167	NM_027445|Rnf167|70510|ring finger protein 167	AK154071|Rnf167|70510|ring finger protein 167
mm9_v1_chr18_-_39078304_39078358	0.399877	FOX{D1,D2}.p2	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr1_-_187153269_187153279	0.399543	FOX{D1,D2}.p2	AK085714|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043590|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK048653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK078183|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	NM_198653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr5_-_31210160_31210170	0.397837	FOX{D1,D2}.p2	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr7_-_29999001_29999053	0.396832	FOX{D1,D2}.p2	AK133307|Catsperg1|320225|cation channel, sperm-associated, gamma 1	NM_001164658|Catsperg1|320225|cation channel, sperm-associated, gamma 1	AK039202|Catsperg1|320225|cation channel, sperm-associated, gamma 1
mm9_v1_chrX_-_133267605_133267741	0.391714	FOX{D1,D2}.p2	
mm9_v1_chr4_-_45024999_45025283	0.390885	FOX{D1,D2}.p2	AK160003|Zbtb5|230119|zinc finger and BTB domain containing 5	BC054551|Zbtb5|230119|zinc finger and BTB domain containing 5	AK031172|Zbtb5|230119|zinc finger and BTB domain containing 5	AY635051|Zbtb5|230119|zinc finger and BTB domain containing 5	BC057545|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163283|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163284|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_173399|Zbtb5|230119|zinc finger and BTB domain containing 5
mm9_v1_chr3_+_102799635_102799652	0.390278	FOX{D1,D2}.p2	AK035590|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr11_-_118025722_118025748	0.388874	FOX{D1,D2}.p2	AK210975|Cyth1|19157|cytohesin 1
mm9_v1_chrX_-_91368427_91368500	0.388579	FOX{D1,D2}.p2	BC028506|Zfx|22764|zinc finger protein X-linked	M32308|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr8_-_8690519_8690552	0.387496	FOX{D1,D2}.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr1_+_157883131_157883262	0.385999	FOX{D1,D2}.p2	NM_001160182|Tor1aip2|240832|torsin A interacting protein 2	BC060258|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr14_+_99697896_99697918	0.385882	FOX{D1,D2}.p2	AK051409|Klf5|12224|Kruppel-like factor 5	NM_009769|Klf5|12224|Kruppel-like factor 5	BC011307|Klf5|12224|Kruppel-like factor 5	BC012958|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr3_+_95039985_95040105	0.384275	FOX{D1,D2}.p2	
mm9_v1_chr7_-_59117613_59117656	0.381777	FOX{D1,D2}.p2	NM_001115087|Fancf|100040608|Fanconi anemia, complementation group F
mm9_v1_chr2_+_145685882_145685886	0.379869	FOX{D1,D2}.p2	AK163047|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr15_+_88919467_88919574	0.376834	FOX{D1,D2}.p2	BC141293|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK088096|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK054432|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK161059|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK005048|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117817|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117818|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	NM_027905|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene
mm9_v1_chr7_-_25545329_25545329	0.376457	FOX{D1,D2}.p2	BC027283|Cd177|68891|CD177 antigen	NM_026862|Cd177|68891|CD177 antigen
mm9_v1_chr9_+_78463569_78463695	0.374452	FOX{D1,D2}.p2	AK076475|Cd109|235505|CD109 antigen	AK029247|Cd109|235505|CD109 antigen	BC052443|Cd109|235505|CD109 antigen	AK036799|Cd109|235505|CD109 antigen
mm9_v1_chr5_+_31224206_31224267	0.373718	FOX{D1,D2}.p2	BC013464|Khk|16548|ketohexokinase	NM_008439|Khk|16548|ketohexokinase
mm9_v1_chr19_+_6298046_6298161	0.372116	FOX{D1,D2}.p2	AK213323|Ehd1|13660|EH-domain containing 1	BC018268|Ehd1|13660|EH-domain containing 1	AK186064|Ehd1|13660|EH-domain containing 1
mm9_v1_chr6_+_113408650_113408888	0.371269	FOX{D1,D2}.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr19_-_24355054_24355107	0.370356	FOX{D1,D2}.p2	BC058533|Fxn|14297|frataxin	BC125337|Fxn|14297|frataxin	BC132337|Fxn|14297|frataxin	NM_008044|Fxn|14297|frataxin	U95736|Fxn|14297|frataxin	AK160458|Fxn|14297|frataxin	AK148147|Fxn|14297|frataxin
mm9_v1_chr8_+_11556679_11556909	0.369713	FOX{D1,D2}.p2	BC147770|Ing1|26356|inhibitor of growth family, member 1	BC147784|Ing1|26356|inhibitor of growth family, member 1	AB221554|Ing1|26356|inhibitor of growth family, member 1	AF149820|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chrX_-_45562050_45562056	0.369529	FOX{D1,D2}.p2	BC090832|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr2_-_155979971_155980032	0.367339	FOX{D1,D2}.p2	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr13_-_25112189_25112247	0.36712	FOX{D1,D2}.p2	NM_001013389|Mrs2|380836|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
mm9_v1_chrX_-_133268136_133268249	0.365625	FOX{D1,D2}.p2	AK211563|Morf4l2|56397|mortality factor 4 like 2	AK211831|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr14_-_58017264_58017339	0.365511	FOX{D1,D2}.p2	AB359906|Cryl1|68631|crystallin, lambda 1	BC004074|Cryl1|68631|crystallin, lambda 1	NM_030004|Cryl1|68631|crystallin, lambda 1	AK020717|Cryl1|68631|crystallin, lambda 1	AK135834|Cryl1|68631|crystallin, lambda 1	BC027064|Cryl1|68631|crystallin, lambda 1	AK080625|Cryl1|68631|crystallin, lambda 1
mm9_v1_chr1_-_13364092_13364163	0.359284	FOX{D1,D2}.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr11_-_88579392_88579430	0.357965	FOX{D1,D2}.p2	AK051269|Msi2|76626|Musashi homolog 2 (Drosophila)	AK031365|Msi2|76626|Musashi homolog 2 (Drosophila)	AK153928|Msi2|76626|Musashi homolog 2 (Drosophila)	AK169846|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr19_-_40525876_40525887	0.357429	FOX{D1,D2}.p2	AF078666|Sorbs1|20411|sorbin and SH3 domain containing 1	AF078667|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_001034962|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_001034963|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr18_-_78320014_78320074	0.35572	FOX{D1,D2}.p2	AK012066|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AJ420967|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC058594|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC100570|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC086673|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AK153891|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr1_-_36330235_36330291	0.354688	FOX{D1,D2}.p2	BC056622|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AF321278|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	NM_153408|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AK040949|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AK156207|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)
mm9_v1_chr10_-_82085891_82085972	0.353929	FOX{D1,D2}.p2	NM_001135567|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135568|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135569|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr14_-_55560793_55560834	0.352742	FOX{D1,D2}.p2	
mm9_v1_chr7_-_126666995_126666995	0.351895	FOX{D1,D2}.p2	AK005692|Pdilt|71830|protein disulfide isomerase-like, testis expressed	NM_027943|Pdilt|71830|protein disulfide isomerase-like, testis expressed
mm9_v1_chr3_-_51144470_51144612	0.350942	FOX{D1,D2}.p2	AK160118|Elf2|69257|E74-like factor 2	AK139199|Elf2|69257|E74-like factor 2	BC069901|Elf2|69257|E74-like factor 2	AK146819|Elf2|69257|E74-like factor 2
mm9_v1_chr8_-_28266926_28267017	0.349703	FOX{D1,D2}.p2	BC091001|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)
mm9_v1_chr10_+_42580317_42580598	0.349026	FOX{D1,D2}.p2	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr14_-_21271443_21271446	0.348552	FOX{D1,D2}.p2	AK029536|Ttc18|76670|tetratricopeptide repeat domain 18	BC138269|Ttc18|76670|tetratricopeptide repeat domain 18	BC145225|Ttc18|76670|tetratricopeptide repeat domain 18	BC145226|Ttc18|76670|tetratricopeptide repeat domain 18	NM_001163638|Ttc18|76670|tetratricopeptide repeat domain 18	NM_001163639|Ttc18|76670|tetratricopeptide repeat domain 18	NM_029698|Ttc18|76670|tetratricopeptide repeat domain 18
mm9_v1_chr17_-_26978355_26978414	0.346263	FOX{D1,D2}.p2	BC139299|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	BC139303|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	AK142146|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr11_-_54965186_54965209	0.346102	FOX{D1,D2}.p2	AY211261|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	AK132910|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	AF453745|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	NM_172258|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	BC049682|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3
mm9_v1_chr3_-_36470904_36470919	0.344625	FOX{D1,D2}.p2	NM_009828|Ccna2|12428|cyclin A2	AK044924|Ccna2|12428|cyclin A2
mm9_v1_chr13_-_112280018_112280262	0.342875	FOX{D1,D2}.p2	BC067075|Gpbp1|73274|GC-rich promoter binding protein 1	AK136894|Gpbp1|73274|GC-rich promoter binding protein 1	AK161928|Gpbp1|73274|GC-rich promoter binding protein 1	BC094888|Gpbp1|73274|GC-rich promoter binding protein 1	AK169406|Gpbp1|73274|GC-rich promoter binding protein 1	AY382529|Gpbp1|73274|GC-rich promoter binding protein 1	AK082704|Gpbp1|73274|GC-rich promoter binding protein 1	BC096442|Gpbp1|73274|GC-rich promoter binding protein 1	BC076635|Gpbp1|73274|GC-rich promoter binding protein 1	AK163370|Gpbp1|73274|GC-rich promoter binding protein 1	AK135728|Gpbp1|73274|GC-rich promoter binding protein 1	AK145318|Gpbp1|73274|GC-rich promoter binding protein 1	AK163390|Gpbp1|73274|GC-rich promoter binding protein 1	NM_001122963|Gpbp1|73274|GC-rich promoter binding protein 1	NM_028487|Gpbp1|73274|GC-rich promoter binding protein 1	AK006608|Gpbp1|73274|GC-rich promoter binding protein 1
mm9_v1_chr7_+_109214226_109214271	0.342306	FOX{D1,D2}.p2	AK040538|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	NM_011644|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK013894|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK041300|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2
mm9_v1_chr8_+_13159112_13159277	0.341855	FOX{D1,D2}.p2	NM_010684|Lamp1|16783|lysosomal-associated membrane protein 1	BC049097|Lamp1|16783|lysosomal-associated membrane protein 1	AY069968|Lamp1|16783|lysosomal-associated membrane protein 1	AK172007|Lamp1|16783|lysosomal-associated membrane protein 1	AK159096|Lamp1|16783|lysosomal-associated membrane protein 1	AK004637|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr2_-_120389527_120389553	0.340146	FOX{D1,D2}.p2	BC025424|Zfp106|20402|zinc finger protein 106
mm9_v1_chr5_-_137041588_137041697	0.338668	FOX{D1,D2}.p2	AB041595|Cux1|13047|cut-like homeobox 1
mm9_v1_chr13_+_73468441_73468488	0.337857	FOX{D1,D2}.p2	AK160778|Mrpl36|94066|mitochondrial ribosomal protein L36	BC009166|Mrpl36|94066|mitochondrial ribosomal protein L36	NM_053163|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131597|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131601|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131604|Mrpl36|94066|mitochondrial ribosomal protein L36	AK075780|Mrpl36|94066|mitochondrial ribosomal protein L36	AB049655|Mrpl36|94066|mitochondrial ribosomal protein L36
mm9_v1_chr16_+_17331507_17331521	0.336034	FOX{D1,D2}.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr4_+_94260340_94260340	0.335604	FOX{D1,D2}.p2	NM_001081019|Gm12657|667250|predicted gene 12657
mm9_v1_chr1_-_146096156_146096233	0.334169	FOX{D1,D2}.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chrX_-_91368238_91368406	0.333655	FOX{D1,D2}.p2	M32309|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr14_-_37690597_37690679	0.332614	FOX{D1,D2}.p2	AK084686|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr17_-_66234633_66234667	0.331476	FOX{D1,D2}.p2	AK145387|Ralbp1|19765|ralA binding protein 1	BC028516|Ralbp1|19765|ralA binding protein 1	AK133613|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr3_-_9833502_9833678	0.330811	FOX{D1,D2}.p2	BC145328|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145761|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145763|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK172106|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156986|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK040230|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK041695|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK089329|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156000|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_001195031|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_053182|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1
mm9_v1_chr10_-_60609031_60609082	0.330708	FOX{D1,D2}.p2	CT010214|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr10_+_19890580_19890589	0.324626	FOX{D1,D2}.p2	AK138516|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene	AK138667|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene
mm9_v1_chr3_+_93246251_93246251	0.323656	FOX{D1,D2}.p2	NM_001163098|Tchh|99681|trichohyalin
mm9_v1_chr17_-_25023253_25023304	0.322203	FOX{D1,D2}.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr19_+_4006795_4006924	0.32217	FOX{D1,D2}.p2	
mm9_v1_chr19_-_57193391_57193513	0.32062	FOX{D1,D2}.p2	AK078723|Ablim1|226251|actin-binding LIM protein 1	AK165766|Ablim1|226251|actin-binding LIM protein 1	AK172605|Ablim1|226251|actin-binding LIM protein 1	AF404776|Ablim1|226251|actin-binding LIM protein 1	NM_001103178|Ablim1|226251|actin-binding LIM protein 1	AK008893|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr14_+_26484518_26484659	0.318238	FOX{D1,D2}.p2	AK132106|Gm10397|100038401|predicted gene 10397
mm9_v1_chr16_+_94085504_94085555	0.315375	FOX{D1,D2}.p2	NM_011377|Sim2|20465|single-minded homolog 2 (Drosophila)	D63383|Sim2|20465|single-minded homolog 2 (Drosophila)	D64135|Sim2|20465|single-minded homolog 2 (Drosophila)
mm9_v1_chr10_-_127648817_127648880	0.3106	FOX{D1,D2}.p2	BC014757|Spryd4|66701|SPRY domain containing 4	NM_025716|Spryd4|66701|SPRY domain containing 4	AK014623|Spryd4|66701|SPRY domain containing 4	AK080726|Spryd4|66701|SPRY domain containing 4	AK082745|Spryd4|66701|SPRY domain containing 4
mm9_v1_chr9_+_44448105_44448130	0.309329	FOX{D1,D2}.p2	AK003265|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr15_-_88564636_88564674	0.307667	FOX{D1,D2}.p2	NM_001033274|Brd1|223770|bromodomain containing 1	AK149714|Brd1|223770|bromodomain containing 1
mm9_v1_chr5_+_148241736_148241750	0.303711	FOX{D1,D2}.p2	AK153632|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr15_-_37909575_37909591	0.303166	FOX{D1,D2}.p2	BC064751|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr4_-_96330805_96330814	0.301467	FOX{D1,D2}.p2	AK143932|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	NM_010007|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr9_+_109735261_109735329	0.301369	FOX{D1,D2}.p2	AK004201|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	AF051942|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	BC002007|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	NM_018757|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr1_-_64167818_64167853	0.300885	FOX{D1,D2}.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr1_+_145487825_145487990	0.298224	FOX{D1,D2}.p2	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chrX_-_7258126_7258153	0.298194	FOX{D1,D2}.p2	BC132580|Magix|54634|MAGI family member, X-linked	BC132582|Magix|54634|MAGI family member, X-linked
mm9_v1_chr11_-_86539846_86539984	0.298141	FOX{D1,D2}.p2	AK049578|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr11_-_65083322_65083378	0.296977	FOX{D1,D2}.p2	BC141281|Myocd|214384|myocardin	BC145607|Myocd|214384|myocardin
mm9_v1_chr2_+_80171439_80171527	0.294843	FOX{D1,D2}.p2	AK190686|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK204346|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK206826|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC002207|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr9_-_82869034_82869071	0.294308	FOX{D1,D2}.p2	BC022102|Phip|83946|pleckstrin homology domain interacting protein	BC039765|Phip|83946|pleckstrin homology domain interacting protein	AK050025|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr4_+_83171448_83171542	0.293889	FOX{D1,D2}.p2	NM_001081012|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK170886|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015166|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK029637|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015563|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK041005|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC023323|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC172165|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene
mm9_v1_chr10_-_66747843_66748097	0.292532	FOX{D1,D2}.p2	AK181810|Nrbf2|641340|nuclear receptor binding factor 2	AK189272|Nrbf2|641340|nuclear receptor binding factor 2	AK205591|Nrbf2|641340|nuclear receptor binding factor 2	AK004200|Nrbf2|641340|nuclear receptor binding factor 2	BC019448|Nrbf2|641340|nuclear receptor binding factor 2	NM_001036293|Nrbf2|641340|nuclear receptor binding factor 2	AK002810|Nrbf2|641340|nuclear receptor binding factor 2
mm9_v1_chr16_-_35769389_35769480	0.292211	FOX{D1,D2}.p2	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr1_-_180259336_180259529	0.291194	FOX{D1,D2}.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr10_+_80783847_80783975	0.290713	FOX{D1,D2}.p2	BC150986|2510012J08Rik|70312|RIKEN cDNA 2510012J08 gene	BC151180|2510012J08Rik|70312|RIKEN cDNA 2510012J08 gene	NM_027381|2510012J08Rik|70312|RIKEN cDNA 2510012J08 gene	AY934504|2510012J08Rik|70312|RIKEN cDNA 2510012J08 gene
mm9_v1_chr10_-_126959397_126959444	0.286781	FOX{D1,D2}.p2	BC051396|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK012355|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK169192|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr1_+_79772668_79772831	0.285897	FOX{D1,D2}.p2	AK156814|Mrpl44|69163|mitochondrial ribosomal protein L44	AK019986|Mrpl44|69163|mitochondrial ribosomal protein L44	AK146024|Mrpl44|69163|mitochondrial ribosomal protein L44	AK150537|Mrpl44|69163|mitochondrial ribosomal protein L44	AK151854|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr11_-_99949426_99949428	0.282828	FOX{D1,D2}.p2	BC118064|Krt32|16670|keratin 32	BC117553|Krt32|16670|keratin 32	NM_001159374|Krt32|16670|keratin 32	X75649|Krt32|16670|keratin 32
mm9_v1_chr17_-_26978455_26978553	0.280251	FOX{D1,D2}.p2	NM_008700|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	X75415|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr10_+_21015762_21015859	0.280222	FOX{D1,D2}.p2	NM_001042593|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_001145209|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_019702|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK006626|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK146678|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK166140|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK168671|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK169281|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK012856|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK173091|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC085235|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC010251|Hbs1l|56422|Hbs1-like (S. cerevisiae)
mm9_v1_chr2_+_34262387_34262397	0.27998	FOX{D1,D2}.p2	BC096618|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr17_+_35390491_35390518	0.279511	FOX{D1,D2}.p2	AK196028|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr5_-_31482270_31482315	0.27934	FOX{D1,D2}.p2	AK083636|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	BC034369|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK151300|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK035792|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK043944|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK152439|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK149771|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK159938|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK088596|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK138760|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK004895|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK154056|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta
mm9_v1_chr3_+_146113449_146113466	0.279234	FOX{D1,D2}.p2	AK008791|Ctbs|74245|chitobiase, di-N-acetyl-	DQ100384|Ctbs|74245|chitobiase, di-N-acetyl-	NM_028836|Ctbs|74245|chitobiase, di-N-acetyl-
mm9_v1_chr13_+_27186058_27186083	0.27846	FOX{D1,D2}.p2	AK082929|Prl3d1|18775|prolactin family 3, subfamily d, member 1	NM_008864|Prl3d1|18775|prolactin family 3, subfamily d, member 1	BC064736|Prl3d1|18775|prolactin family 3, subfamily d, member 1	M35662|Prl3d1|18775|prolactin family 3, subfamily d, member 1	AF525162|Prl3d1|18775|prolactin family 3, subfamily d, member 1
mm9_v1_chr19_-_60302398_60302548	0.273295	FOX{D1,D2}.p2	BC061459|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK162079|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr10_-_126959446_126959510	0.266937	FOX{D1,D2}.p2	AK037339|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	BC004825|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK051207|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	NM_028230|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK162421|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr1_+_9838330_9838477	0.266856	FOX{D1,D2}.p2	AK030314|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_001037759|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166531|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK146561|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031328|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171959|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr4_+_108520389_108520516	0.264131	FOX{D1,D2}.p2	BC021493|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK003197|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	NM_029571|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK148185|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK150178|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK156755|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)
mm9_v1_chr15_-_101784712_101784719	0.262403	FOX{D1,D2}.p2	AK146611|Krt78|332131|keratin 78	NM_212487|Krt78|332131|keratin 78
mm9_v1_chr5_+_16078748_16078768	0.260431	FOX{D1,D2}.p2	AK164241|Hgf|15234|hepatocyte growth factor
mm9_v1_chr8_-_125222837_125223008	0.26021	FOX{D1,D2}.p2	BC141396|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	BC151156|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	AF038029|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	NM_009824|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm9_v1_chr4_-_115747606_115747639	0.259873	FOX{D1,D2}.p2	AK003539|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	BC011388|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK019085|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK003266|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK088185|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK054005|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr2_-_129627180_129627194	0.258181	FOX{D1,D2}.p2	AB041802|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK016906|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK030036|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene
mm9_v1_chr7_-_109248742_109248742	0.256599	FOX{D1,D2}.p2	AK132854|Art5|11875|ADP-ribosyltransferase 5	NM_007491|Art5|11875|ADP-ribosyltransferase 5
mm9_v1_chr11_+_106649938_106649986	0.254499	FOX{D1,D2}.p2	AK089185|Ccdc45|320162|coiled-coil domain containing 45	AK084665|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr15_+_37163001_37163168	0.254156	FOX{D1,D2}.p2	BC055035|Grhl2|252973|grainyhead-like 2 (Drosophila)	AF411213|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr4_+_153544821_153544830	0.253818	FOX{D1,D2}.p2	NM_001162977|Megf6|230971|multiple EGF-like-domains 6
mm9_v1_chr16_-_17561311_17561339	0.252309	FOX{D1,D2}.p2	AK143245|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK039092|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115678|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115679|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK132588|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK161226|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_001145435|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_029053|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene
mm9_v1_chrX_-_140261831_140261910	0.251881	FOX{D1,D2}.p2	BC052167|Capn6|12338|calpain 6	Y12582|Capn6|12338|calpain 6	AK048028|Capn6|12338|calpain 6
mm9_v1_chr8_-_89269823_89269841	0.25123	FOX{D1,D2}.p2	Z19579|Siah1a|20437|seven in absentia 1A
mm9_v1_chr4_-_94645735_94645794	0.250178	FOX{D1,D2}.p2	AK164103|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK081684|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK145221|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK166402|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC150946|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC151172|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK043802|Mysm1|320713|myb-like, SWIRM and MPN domains 1	NM_177239|Mysm1|320713|myb-like, SWIRM and MPN domains 1
mm9_v1_chr17_+_35978442_35978442	0.249515	FOX{D1,D2}.p2	NM_001010833|Mdc1|240087|mediator of DNA damage checkpoint 1
mm9_v1_chr14_-_27353156_27353225	0.246886	FOX{D1,D2}.p2	AK129403|Slmap|83997|sarcolemma associated protein	NM_032008|Slmap|83997|sarcolemma associated protein
mm9_v1_chr13_+_40955500_40955723	0.24627	FOX{D1,D2}.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr16_+_18498805_18498912	0.245729	FOX{D1,D2}.p2	AK087954|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	NM_001081682|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK016952|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK171253|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AF301595|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr8_+_4248213_4248213	0.244981	FOX{D1,D2}.p2	NM_001195258|Gm14378|100044509|predicted gene 14378
mm9_v1_chr10_+_41530379_41530379	0.244228	FOX{D1,D2}.p2	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr1_-_189039299_189039343	0.242062	FOX{D1,D2}.p2	AY747687|Spata17|74717|spermatogenesis associated 17	BC089520|Spata17|74717|spermatogenesis associated 17	AK050925|Spata17|74717|spermatogenesis associated 17	NM_028848|Spata17|74717|spermatogenesis associated 17	NM_029067|Spata17|74717|spermatogenesis associated 17
mm9_v1_chr1_+_59030365_59030647	0.239165	FOX{D1,D2}.p2	AK140272|Stradb|227154|STE20-related kinase adaptor beta	NM_172656|Stradb|227154|STE20-related kinase adaptor beta	AK036678|Stradb|227154|STE20-related kinase adaptor beta	BC055814|Stradb|227154|STE20-related kinase adaptor beta	AK046790|Stradb|227154|STE20-related kinase adaptor beta	AK080096|Stradb|227154|STE20-related kinase adaptor beta	AK035207|Stradb|227154|STE20-related kinase adaptor beta	AK086974|Stradb|227154|STE20-related kinase adaptor beta	BC037003|Stradb|227154|STE20-related kinase adaptor beta	BC060956|Stradb|227154|STE20-related kinase adaptor beta	AK146079|Stradb|227154|STE20-related kinase adaptor beta	AB057666|Stradb|227154|STE20-related kinase adaptor beta	AB057667|Stradb|227154|STE20-related kinase adaptor beta
mm9_v1_chr8_+_26707480_26707573	0.235229	FOX{D1,D2}.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr16_-_15637390_15637492	0.234973	FOX{D1,D2}.p2	AK089999|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK135422|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK157725|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK220442|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	D26089|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK083618|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK151499|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK088796|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK146662|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK011743|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	BC013094|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK036653|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK141132|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	AK141644|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)	NM_008565|Mcm4|17217|minichromosome maintenance deficient 4 homolog (S. cerevisiae)
mm9_v1_chr13_-_64468380_64468393	0.234529	FOX{D1,D2}.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr12_-_84938095_84938119	0.233146	FOX{D1,D2}.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr5_-_93611701_93611836	0.232224	FOX{D1,D2}.p2	
mm9_v1_chr7_-_81429262_81429274	0.227755	FOX{D1,D2}.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr6_-_131197295_131197381	0.227648	FOX{D1,D2}.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr13_+_17787239_17787293	0.226505	FOX{D1,D2}.p2	AK030630|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	NM_025479|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK012770|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK011919|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK141333|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139338|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139341|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene
mm9_v1_chr1_+_180168023_180168042	0.222871	FOX{D1,D2}.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr9_-_37464614_37464896	0.222804	FOX{D1,D2}.p2	AK185995|Tbrg1|21376|transforming growth factor beta regulated gene 1	DQ144541|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK131638|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151075|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151209|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC054057|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC037145|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151457|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC040813|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC065795|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC043022|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK166547|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011268|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK150549|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK003270|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011614|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK010925|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC021331|Tbrg1|21376|transforming growth factor beta regulated gene 1	NM_025289|Tbrg1|21376|transforming growth factor beta regulated gene 1
mm9_v1_chr2_-_120389559_120389604	0.221606	FOX{D1,D2}.p2	AK147887|Zfp106|20402|zinc finger protein 106	AK089359|Zfp106|20402|zinc finger protein 106	AK155019|Zfp106|20402|zinc finger protein 106	NM_011743|Zfp106|20402|zinc finger protein 106
mm9_v1_chr16_+_17331463_17331501	0.218866	FOX{D1,D2}.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr2_+_20211539_20211581	0.218595	FOX{D1,D2}.p2	NM_001081006|Etl4|208618|enhancer trap locus 4
mm9_v1_chr19_-_10630215_10630267	0.217871	FOX{D1,D2}.p2	BC052053|Tmem216|68642|transmembrane protein 216	AK080725|Tmem216|68642|transmembrane protein 216	AK013286|Tmem216|68642|transmembrane protein 216
mm9_v1_chr11_+_62875160_62875262	0.216322	FOX{D1,D2}.p2	AK016718|Tekt3|71062|tektin 3	AY252101|Tekt3|71062|tektin 3	NM_027660|Tekt3|71062|tektin 3	BC139074|Tekt3|71062|tektin 3	BC139075|Tekt3|71062|tektin 3	BC127605|Tekt3|71062|tektin 3	BC128270|Tekt3|71062|tektin 3
mm9_v1_chrX_-_7258190_7258376	0.211571	FOX{D1,D2}.p2	BC099459|Magix|54634|MAGI family member, X-linked	NM_018832|Magix|54634|MAGI family member, X-linked	AK158091|Magix|54634|MAGI family member, X-linked	AK077898|Magix|54634|MAGI family member, X-linked
mm9_v1_chr14_-_65059694_65059876	0.209698	FOX{D1,D2}.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr3_+_88940542_88940546	0.207035	FOX{D1,D2}.p2	AK149508|Pklr|18770|pyruvate kinase liver and red blood cell	NM_001099779|Pklr|18770|pyruvate kinase liver and red blood cell	AK149524|Pklr|18770|pyruvate kinase liver and red blood cell
mm9_v1_chr5_+_88314719_88314719	0.204781	FOX{D1,D2}.p2	EF113909|Odam|69592|odontogenic, ameloblast asssociated	NM_027128|Odam|69592|odontogenic, ameloblast asssociated
mm9_v1_chr12_+_75028976_75029036	0.20335	FOX{D1,D2}.p2	AK076395|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr18_+_14941735_14941757	0.202661	FOX{D1,D2}.p2	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr17_+_40948047_40948124	0.202451	FOX{D1,D2}.p2	AK157847|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF057526|Rhag|19743|Rhesus blood group-associated A glycoprotein	AK143851|Rhag|19743|Rhesus blood group-associated A glycoprotein	NM_011269|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101941|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101942|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103512|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103662|Rhag|19743|Rhesus blood group-associated A glycoprotein	AB015192|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF065395|Rhag|19743|Rhesus blood group-associated A glycoprotein
mm9_v1_chr3_-_90047433_90047433	0.20207	FOX{D1,D2}.p2	AB182651|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	AK019928|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	NM_030080|Creb3l4|78284|cAMP responsive element binding protein 3-like 4
mm9_v1_chr6_+_41471774_41471798	0.201043	FOX{D1,D2}.p2	NM_009430|Prss2|22072|protease, serine, 2	AK003082|Prss2|22072|protease, serine, 2	X04574|Prss2|22072|protease, serine, 2	BC064796|Prss2|22072|protease, serine, 2
mm9_v1_chr2_+_34262399_34262511	0.20075	FOX{D1,D2}.p2	BC043296|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr10_-_36855292_36855411	0.199823	FOX{D1,D2}.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr6_-_52168571_52168571	0.199768	FOX{D1,D2}.p2	NM_010455|Hoxa7|15404|homeobox A7
mm9_v1_chr11_-_110112926_110113089	0.195738	FOX{D1,D2}.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr10_-_86164623_86164759	0.194229	FOX{D1,D2}.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr3_-_27052733_27052775	0.190489	FOX{D1,D2}.p2	AK040174|Ect2|13605|ect2 oncogene	BC045614|Ect2|13605|ect2 oncogene	BC025565|Ect2|13605|ect2 oncogene	BC032155|Ect2|13605|ect2 oncogene	BC023881|Ect2|13605|ect2 oncogene	AK157718|Ect2|13605|ect2 oncogene	L11316|Ect2|13605|ect2 oncogene	AK220452|Ect2|13605|ect2 oncogene	NM_001177625|Ect2|13605|ect2 oncogene	NM_007900|Ect2|13605|ect2 oncogene
mm9_v1_chr6_+_121586190_121586250	0.184223	FOX{D1,D2}.p2	NM_175628|A2m|232345|alpha-2-macroglobulin	AY185125|A2m|232345|alpha-2-macroglobulin	BC072642|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr1_-_108693180_108693301	0.183425	FOX{D1,D2}.p2	AK168270|Vps4b|20479|vacuolar protein sorting 4b (yeast)	BC003799|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK165594|Vps4b|20479|vacuolar protein sorting 4b (yeast)	U10119|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK151023|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK152131|Vps4b|20479|vacuolar protein sorting 4b (yeast)	NM_009190|Vps4b|20479|vacuolar protein sorting 4b (yeast)
mm9_v1_chr11_-_100275977_100276079	0.18227	FOX{D1,D2}.p2	AK029271|Leprel4|66180|leprecan-like 4
mm9_v1_chr14_+_21520038_21520084	0.182062	FOX{D1,D2}.p2	
mm9_v1_chr14_+_15179435_15179644	0.180276	FOX{D1,D2}.p2	BC077736|Il3ra|16188|interleukin 3 receptor, alpha chain	FJ550346|Il3ra|16188|interleukin 3 receptor, alpha chain
mm9_v1_chr2_+_122573644_122573786	0.179306	FOX{D1,D2}.p2	
mm9_v1_chr7_-_88046106_88046156	0.178137	FOX{D1,D2}.p2	BC028870|Wdr73|71968|WD repeat domain 73	BC068122|Wdr73|71968|WD repeat domain 73	BC087940|Wdr73|71968|WD repeat domain 73	AK034740|Wdr73|71968|WD repeat domain 73	AK169377|Wdr73|71968|WD repeat domain 73	AK004708|Wdr73|71968|WD repeat domain 73	AK010448|Wdr73|71968|WD repeat domain 73	AK220207|Wdr73|71968|WD repeat domain 73	AK049132|Wdr73|71968|WD repeat domain 73	AK169527|Wdr73|71968|WD repeat domain 73	NM_028026|Wdr73|71968|WD repeat domain 73
mm9_v1_chr2_+_154016550_154016559	0.176897	FOX{D1,D2}.p2	BC060982|U46068|228801|cDNA sequence U46068	BC089529|U46068|228801|cDNA sequence U46068	NM_001012392|U46068|228801|cDNA sequence U46068	AK146605|U46068|228801|cDNA sequence U46068	BC100436|U46068|228801|cDNA sequence U46068
mm9_v1_chr1_+_40496493_40496633	0.176849	FOX{D1,D2}.p2	NM_010743|Il1rl1|17082|interleukin 1 receptor-like 1	AK033417|Il1rl1|17082|interleukin 1 receptor-like 1	AK145118|Il1rl1|17082|interleukin 1 receptor-like 1	Y07519|Il1rl1|17082|interleukin 1 receptor-like 1	M24843|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chr16_+_44943790_44943885	0.17607	FOX{D1,D2}.p2	NM_001128132|Cd200r3|74603|CD200 receptor 3	NM_001128133|Cd200r3|74603|CD200 receptor 3	NM_027578|Cd200r3|74603|CD200 receptor 3	NM_029018|Cd200r3|74603|CD200 receptor 3	AK040868|Cd200r3|74603|CD200 receptor 3	AK014637|Cd200r3|74603|CD200 receptor 3	AY230199|Cd200r3|74603|CD200 receptor 3	BC106838|Cd200r3|74603|CD200 receptor 3	AK014671|Cd200r3|74603|CD200 receptor 3	AK170363|Cd200r3|74603|CD200 receptor 3	AY703837|Cd200r3|74603|CD200 receptor 3	AY703838|Cd200r3|74603|CD200 receptor 3	AY703839|Cd200r3|74603|CD200 receptor 3	AY703840|Cd200r3|74603|CD200 receptor 3	AY703841|Cd200r3|74603|CD200 receptor 3	AY703842|Cd200r3|74603|CD200 receptor 3
mm9_v1_chrX_+_91969907_91969907	0.175122	FOX{D1,D2}.p2	NM_001081473|Zxdb|668166|zinc finger, X-linked, duplicated B
mm9_v1_chr6_+_30400873_30400960	0.174218	FOX{D1,D2}.p2	
mm9_v1_chr1_-_30920095_30920100	0.173236	FOX{D1,D2}.p2	BC011226|Phf3|213109|PHD finger protein 3	BC032205|Phf3|213109|PHD finger protein 3	BC137913|Phf3|213109|PHD finger protein 3	NM_001081080|Phf3|213109|PHD finger protein 3
mm9_v1_chr13_-_55528131_55528182	0.172476	FOX{D1,D2}.p2	BC037085|F12|58992|coagulation factor XII (Hageman factor)	X99571|F12|58992|coagulation factor XII (Hageman factor)	BC049867|F12|58992|coagulation factor XII (Hageman factor)	BC057921|F12|58992|coagulation factor XII (Hageman factor)	NM_021489|F12|58992|coagulation factor XII (Hageman factor)
mm9_v1_chr5_-_24781987_24782111	0.172057	FOX{D1,D2}.p2	AK077567|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr7_-_29965419_29965499	0.171948	FOX{D1,D2}.p2	BC005717|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK027973|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150982|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK167948|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159216|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK168886|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr9_+_59387346_59387423	0.170925	FOX{D1,D2}.p2	AK144168|Hexa|15211|hexosaminidase A
mm9_v1_chr12_-_56921919_56921956	0.170148	FOX{D1,D2}.p2	AK129236|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chrX_+_8849858_8849881	0.168882	FOX{D1,D2}.p2	BC027097|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr14_+_47621014_47621039	0.168807	FOX{D1,D2}.p2	AK006299|Samd4|74480|sterile alpha motif domain containing 4	NM_001163433|Samd4|74480|sterile alpha motif domain containing 4	AK161277|Samd4|74480|sterile alpha motif domain containing 4	AK018954|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr12_-_70825850_70825878	0.167685	FOX{D1,D2}.p2	AK145228|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase	NM_145443|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase
mm9_v1_chr2_-_118082593_118082701	0.166929	FOX{D1,D2}.p2	BC125024|Fsip1|71313|fibrous sheath-interacting protein 1	AK017026|Fsip1|71313|fibrous sheath-interacting protein 1	AK005924|Fsip1|71313|fibrous sheath-interacting protein 1	AF448787|Fsip1|71313|fibrous sheath-interacting protein 1	NM_027759|Fsip1|71313|fibrous sheath-interacting protein 1
mm9_v1_chr6_-_52163065_52163065	0.166249	FOX{D1,D2}.p2	NM_010452|Hoxa3|15400|homeobox A3
mm9_v1_chr15_-_36701729_36701849	0.164325	FOX{D1,D2}.p2	AK149013|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr10_+_100055019_100055050	0.162953	FOX{D1,D2}.p2	NM_001081246|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK014917|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK006074|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene
mm9_v1_chr6_-_135118114_135118240	0.16244	FOX{D1,D2}.p2	CT010262|Hebp1|15199|heme binding protein 1	BC012654|Hebp1|15199|heme binding protein 1	AK165308|Hebp1|15199|heme binding protein 1	AB013095|Hebp1|15199|heme binding protein 1	AK008919|Hebp1|15199|heme binding protein 1	AF117613|Hebp1|15199|heme binding protein 1	NM_013546|Hebp1|15199|heme binding protein 1
mm9_v1_chr7_+_27814096_27814122	0.162138	FOX{D1,D2}.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr7_-_140974399_140974445	0.161958	FOX{D1,D2}.p2	AK028910|Dhx32|101437|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm9_v1_chr6_+_90424727_90424917	0.160975	FOX{D1,D2}.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr6_-_97098845_97098885	0.160702	FOX{D1,D2}.p2	AK037507|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene	NM_175313|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene
mm9_v1_chr5_-_93635416_93635523	0.160252	FOX{D1,D2}.p2	AK177544|Ccni|12453|cyclin I	AK079476|Ccni|12453|cyclin I	AK152614|Ccni|12453|cyclin I	AK050465|Ccni|12453|cyclin I	NM_017367|Ccni|12453|cyclin I
mm9_v1_chrX_-_138159759_138159833	0.158647	FOX{D1,D2}.p2	BC060235|Irs4|16370|insulin receptor substrate 4	NM_010572|Irs4|16370|insulin receptor substrate 4	BC150782|Irs4|16370|insulin receptor substrate 4
mm9_v1_chr13_+_105019467_105019467	0.158471	FOX{D1,D2}.p2	AB043687|Cenpk|60411|centromere protein K	NM_021790|Cenpk|60411|centromere protein K
mm9_v1_chr11_-_40506062_40506146	0.155389	FOX{D1,D2}.p2	BC003457|Mat2b|108645|methionine adenosyltransferase II, beta	NM_134017|Mat2b|108645|methionine adenosyltransferase II, beta	AK038303|Mat2b|108645|methionine adenosyltransferase II, beta	AK153126|Mat2b|108645|methionine adenosyltransferase II, beta	AB070267|Mat2b|108645|methionine adenosyltransferase II, beta
mm9_v1_chr6_-_115803305_115803382	0.153319	FOX{D1,D2}.p2	AK148171|Mbd4|17193|methyl-CpG binding domain protein 4	BC024812|Mbd4|17193|methyl-CpG binding domain protein 4	NM_010774|Mbd4|17193|methyl-CpG binding domain protein 4	AF072249|Mbd4|17193|methyl-CpG binding domain protein 4	AK161005|Mbd4|17193|methyl-CpG binding domain protein 4
mm9_v1_chr15_+_9001154_9001214	0.153215	FOX{D1,D2}.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr3_-_105804304_105804414	0.152122	FOX{D1,D2}.p2	HM237137|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene	AK006407|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene	NM_029604|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene
mm9_v1_chr5_+_33678157_33678258	0.150755	FOX{D1,D2}.p2	AK145800|Maea|59003|macrophage erythroblast attacher	AK168788|Maea|59003|macrophage erythroblast attacher	AK049424|Maea|59003|macrophage erythroblast attacher	AK088854|Maea|59003|macrophage erythroblast attacher	AK152523|Maea|59003|macrophage erythroblast attacher	AK169149|Maea|59003|macrophage erythroblast attacher	NM_021500|Maea|59003|macrophage erythroblast attacher	AK034859|Maea|59003|macrophage erythroblast attacher	BC058687|Maea|59003|macrophage erythroblast attacher	BC039054|Maea|59003|macrophage erythroblast attacher	AK191436|Maea|59003|macrophage erythroblast attacher	AK218361|Maea|59003|macrophage erythroblast attacher	AK007307|Maea|59003|macrophage erythroblast attacher	AF263247|Maea|59003|macrophage erythroblast attacher
mm9_v1_chr16_-_92400226_92400324	0.149442	FOX{D1,D2}.p2	AF237790|Rcan1|54720|regulator of calcineurin 1	AF263239|Rcan1|54720|regulator of calcineurin 1	BC013551|Rcan1|54720|regulator of calcineurin 1	AK077283|Rcan1|54720|regulator of calcineurin 1	NM_019466|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr1_-_182627107_182627164	0.146985	FOX{D1,D2}.p2	AF201959|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF135063|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AB221547|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF154573|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099876|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099877|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	NM_013729|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)
mm9_v1_chr6_+_40443527_40443590	0.146688	FOX{D1,D2}.p2	BC116952|Tas2r108|57253|taste receptor, type 2, member 108	AY916507|Tas2r108|57253|taste receptor, type 2, member 108	NM_020502|Tas2r108|57253|taste receptor, type 2, member 108
mm9_v1_chr2_+_34262372_34262384	0.146266	FOX{D1,D2}.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr4_-_115747643_115747689	0.145912	FOX{D1,D2}.p2	AK012552|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK018712|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	NM_025641|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr7_-_105347984_105347990	0.145627	FOX{D1,D2}.p2	NM_001081167|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	BC039789|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
mm9_v1_chr8_-_27056759_27056953	0.145063	FOX{D1,D2}.p2	BC019450|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK189846|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK020410|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase
mm9_v1_chr10_+_127196776_127196901	0.14356	FOX{D1,D2}.p2	AK136574|Rdh1|107605|retinol dehydrogenase 1 (all trans)	NM_080436|Rdh1|107605|retinol dehydrogenase 1 (all trans)	AK132181|Rdh9|103142|retinol dehydrogenase 9	AY028928|Rdh1|107605|retinol dehydrogenase 1 (all trans)	BC137930|Rdh1|107605|retinol dehydrogenase 1 (all trans)
mm9_v1_chr8_-_36558514_36558598	0.143126	FOX{D1,D2}.p2	AK165026|Eri1|67276|exoribonuclease 1	BC046412|Eri1|67276|exoribonuclease 1	AK172005|Eri1|67276|exoribonuclease 1	AK144223|Eri1|67276|exoribonuclease 1	AK014041|Eri1|67276|exoribonuclease 1	AK014410|Eri1|67276|exoribonuclease 1	NM_026067|Eri1|67276|exoribonuclease 1
mm9_v1_chr2_+_69058005_69058054	0.14201	FOX{D1,D2}.p2	AK148450|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	Z47787|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	BC111905|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	AK148465|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	NM_021331|G6pc2|14378|glucose-6-phosphatase, catalytic, 2
mm9_v1_chr11_+_70783966_70784013	0.140972	FOX{D1,D2}.p2	AK010289|Rpain|69723|RPA interacting protein	DQ810267|Rpain|69723|RPA interacting protein	DQ810268|Rpain|69723|RPA interacting protein	DQ810269|Rpain|69723|RPA interacting protein	DQ810270|Rpain|69723|RPA interacting protein	DQ810271|Rpain|69723|RPA interacting protein	DQ810272|Rpain|69723|RPA interacting protein
mm9_v1_chr13_+_43497279_43497424	0.1386	FOX{D1,D2}.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr17_-_21982590_21982733	0.138193	FOX{D1,D2}.p2	AK148228|Zfp820|75424|zinc finger protein 820	AK011694|Zfp820|75424|zinc finger protein 820	NM_029281|Zfp820|75424|zinc finger protein 820	BC019219|Zfp820|75424|zinc finger protein 820
mm9_v1_chr3_-_92568947_92568988	0.137887	FOX{D1,D2}.p2	BC117062|Lce1h|67718|late cornified envelope 1H	BC119356|Lce1h|67718|late cornified envelope 1H	AK009424|Lce1h|67718|late cornified envelope 1H	AK010064|Lce1h|67718|late cornified envelope 1H	NM_026335|Lce1h|67718|late cornified envelope 1H
mm9_v1_chr6_+_88045556_88045653	0.136354	FOX{D1,D2}.p2	BC002175|Rpn1|103963|ribophorin I
mm9_v1_chr10_-_127986030_127986175	0.135725	FOX{D1,D2}.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr13_-_13485585_13485897	0.135082	FOX{D1,D2}.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK185470|Gpr137b|83924|G protein-coupled receptor 137B	AK050369|Gpr137b|83924|G protein-coupled receptor 137B	AK080884|Gpr137b|83924|G protein-coupled receptor 137B	AK172286|Gpr137b|83924|G protein-coupled receptor 137B	AK147921|Gpr137b|83924|G protein-coupled receptor 137B	BC003212|Gpr137b|83924|G protein-coupled receptor 137B	AK128965|Gpr137b|83924|G protein-coupled receptor 137B	NM_031999|Gpr137b|83924|G protein-coupled receptor 137B
mm9_v1_chr10_-_128133261_128133372	0.135081	FOX{D1,D2}.p2	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr5_+_110660011_110660183	0.134935	FOX{D1,D2}.p2	AK132187|Ankle2|71782|ankyrin repeat and LEM domain containing 2	BC065071|Ankle2|71782|ankyrin repeat and LEM domain containing 2	NM_027922|Ankle2|71782|ankyrin repeat and LEM domain containing 2	AK043925|Ankle2|71782|ankyrin repeat and LEM domain containing 2
mm9_v1_chr10_-_39971060_39971064	0.134552	FOX{D1,D2}.p2	AK185766|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr2_+_14976877_14977152	0.134476	FOX{D1,D2}.p2	AK042200|Arl5b|75869|ADP-ribosylation factor-like 5B	AK040422|Arl5b|75869|ADP-ribosylation factor-like 5B	BC066810|Arl5b|75869|ADP-ribosylation factor-like 5B	AK041237|Arl5b|75869|ADP-ribosylation factor-like 5B	AK053731|Arl5b|75869|ADP-ribosylation factor-like 5B	NM_029466|Arl5b|75869|ADP-ribosylation factor-like 5B	AK164341|Arl5b|75869|ADP-ribosylation factor-like 5B	AK016359|Arl5b|75869|ADP-ribosylation factor-like 5B
mm9_v1_chr17_+_72022598_72022608	0.133257	FOX{D1,D2}.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr2_+_34287544_34287544	0.132531	FOX{D1,D2}.p2	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr12_-_103196366_103196464	0.131895	FOX{D1,D2}.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr13_-_85428957_85429102	0.129882	FOX{D1,D2}.p2	NM_145452|Rasa1|218397|RAS p21 protein activator 1	AK046620|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr9_-_36604816_36604957	0.129005	FOX{D1,D2}.p2	AK147776|Ei24|13663|etoposide induced 2.4 mRNA	AK159927|Ei24|13663|etoposide induced 2.4 mRNA	AK145018|Ei24|13663|etoposide induced 2.4 mRNA	AK172233|Ei24|13663|etoposide induced 2.4 mRNA
mm9_v1_chr3_-_94846454_94846515	0.127909	FOX{D1,D2}.p2	AB029146|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC009005|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029144|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK010969|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029142|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029143|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029145|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF013099|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF175574|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	NM_008951|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC016433|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK145524|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
mm9_v1_chr6_-_23600205_23600304	0.125936	FOX{D1,D2}.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr8_-_125728514_125728663	0.123711	FOX{D1,D2}.p2	AK181175|Chmp1a|234852|chromatin modifying protein 1A	AK196071|Chmp1a|234852|chromatin modifying protein 1A	AK205507|Chmp1a|234852|chromatin modifying protein 1A	AK216719|Chmp1a|234852|chromatin modifying protein 1A
mm9_v1_chr15_+_78237533_78237533	0.123587	FOX{D1,D2}.p2	BC094469|Mpst|246221|mercaptopyruvate sulfurtransferase	NM_138670|Mpst|246221|mercaptopyruvate sulfurtransferase
mm9_v1_chr8_-_122082340_122082342	0.12358	FOX{D1,D2}.p2	AK002809|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr9_-_123760992_123761028	0.123331	FOX{D1,D2}.p2	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chrM_+_11741_11742	0.123047	FOX{D1,D2}.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr1_+_121423003_121423069	0.12284	FOX{D1,D2}.p2	AK010846|Tmem185b|226351|transmembrane protein 185B
mm9_v1_chr19_+_29141804_29141836	0.12217	FOX{D1,D2}.p2	AK028012|Gm9895|433237|predicted gene 9895
mm9_v1_chr15_-_57309179_57309179	0.117521	FOX{D1,D2}.p2	AK030222|BC026439|210463|cDNA sequence BC026439	NM_172378|BC026439|210463|cDNA sequence BC026439
mm9_v1_chr2_+_124436328_124436346	0.117335	FOX{D1,D2}.p2	AK084922|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AK031307|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr2_+_19579607_19579745	0.116767	FOX{D1,D2}.p2	NM_027715|Otud1|71198|OTU domain containing 1
mm9_v1_chr13_+_27213566_27213578	0.116635	FOX{D1,D2}.p2	BC064735|Prl3d2|215028|prolactin family 3, subfamily d, member 1	AF525160|Prl3d2|215028|prolactin family 3, subfamily d, member 1	NM_172155|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119340|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119344|Prl3d2|215028|prolactin family 3, subfamily d, member 1
mm9_v1_chr16_+_18498963_18499004	0.115562	FOX{D1,D2}.p2	NM_023120|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK158210|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK166195|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK173227|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC029862|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC024635|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chrX_+_54465272_54465331	0.115024	FOX{D1,D2}.p2	BC119225|Cd40lg|21947|CD40 ligand	NM_011616|Cd40lg|21947|CD40 ligand	X65453|Cd40lg|21947|CD40 ligand	EU274582|Cd40lg|21947|CD40 ligand
mm9_v1_chr3_+_88383528_88383608	0.114876	FOX{D1,D2}.p2	AK005340|Ssr2|66256|signal sequence receptor, beta	AK010565|Ssr2|66256|signal sequence receptor, beta	AK084530|Ssr2|66256|signal sequence receptor, beta	AK020145|Ssr2|66256|signal sequence receptor, beta	AK012281|Ssr2|66256|signal sequence receptor, beta	AK050505|Ssr2|66256|signal sequence receptor, beta	NM_025448|Ssr2|66256|signal sequence receptor, beta	BC010214|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr10_-_82085802_82085872	0.114303	FOX{D1,D2}.p2	BC038652|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	BC065417|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK004515|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK045413|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr14_+_56372605_56372670	0.11422	FOX{D1,D2}.p2	AK208092|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr1_+_21339757_21339831	0.114078	FOX{D1,D2}.p2	NM_183322|Khdc1a|368204|KH domain containing 1A	AK136166|Khdc1a|368204|KH domain containing 1A
mm9_v1_chr5_-_33590505_33590587	0.113506	FOX{D1,D2}.p2	
mm9_v1_chr4_-_99495806_99495876	0.112569	FOX{D1,D2}.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr3_-_95799859_95799946	0.109435	FOX{D1,D2}.p2	AK170922|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK170025|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK012945|Plekho1|67220|pleckstrin homology domain containing, family O member 1
mm9_v1_chr7_-_88490106_88490126	0.10917	FOX{D1,D2}.p2	AK012781|Rps17|20068|ribosomal protein S17	AK162335|Rps17|20068|ribosomal protein S17	AK162022|Rps17|20068|ribosomal protein S17	AK167206|Rps17|20068|ribosomal protein S17	BC086900|Rps17|20068|ribosomal protein S17	BC086901|Rps17|20068|ribosomal protein S17	AK010647|Rps17|20068|ribosomal protein S17	NM_009092|Rps17|20068|ribosomal protein S17	AK007992|Rps17|20068|ribosomal protein S17
mm9_v1_chr5_-_121010389_121010403	0.109017	FOX{D1,D2}.p2	AK137626|Tpcn1|252972|two pore channel 1
mm9_v1_chrX_-_159987479_159987608	0.106514	FOX{D1,D2}.p2	BC113145|Grpr|14829|gastrin releasing peptide receptor	M61000|Grpr|14829|gastrin releasing peptide receptor	NM_008177|Grpr|14829|gastrin releasing peptide receptor	AK033473|Grpr|14829|gastrin releasing peptide receptor	M57922|Grpr|14829|gastrin releasing peptide receptor
mm9_v1_chr3_-_151856716_151856729	0.103893	FOX{D1,D2}.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr12_-_93024875_93024875	0.103643	FOX{D1,D2}.p2	AK036612|Ston2|108800|stonin 2	NM_175367|Ston2|108800|stonin 2
mm9_v1_chr18_-_43952520_43952536	0.10319	FOX{D1,D2}.p2	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr16_-_90144013_90144100	0.103183	FOX{D1,D2}.p2	BC065126|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	AK043966|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr4_-_129318200_129318260	0.102588	FOX{D1,D2}.p2	AK141252|Txlna|109658|taxilin alpha
mm9_v1_chr18_-_61696105_61696313	0.101727	FOX{D1,D2}.p2	AK017546|5730411F24Rik|70507|RIKEN cDNA 5730411F24 gene	NM_177828|Arhgef37|328967|Rho guanine nucleotide exchange factor (GEF) 37
mm9_v1_chr5_-_87911282_87911282	0.100055	FOX{D1,D2}.p2	BC048920|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	BC058786|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001024148|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2
mm9_v1_chr19_+_29441927_29441979	0.0996206	FOX{D1,D2}.p2	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr11_-_115884885_115885030	0.0992955	FOX{D1,D2}.p2	
mm9_v1_chr4_-_35792385_35792444	0.0984782	FOX{D1,D2}.p2	BC137866|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC144985|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC145692|Lingo2|242384|leucine rich repeat and Ig domain containing 2	AK045639|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166001|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_175516|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr12_-_11215753_11215777	0.098146	FOX{D1,D2}.p2	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr7_-_38804503_38804582	0.0974344	FOX{D1,D2}.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr4_-_63522069_63522317	0.0973896	FOX{D1,D2}.p2	AK157270|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	L09754|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117093|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117097|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	AK030916|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	NM_009403|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8
mm9_v1_chr8_+_13159279_13159395	0.0962212	FOX{D1,D2}.p2	M25244|Lamp1|16783|lysosomal-associated membrane protein 1	AK159376|Lamp1|16783|lysosomal-associated membrane protein 1	M32015|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr4_+_140723459_140723541	0.0950872	FOX{D1,D2}.p2	AK020135|Fbxo42|213499|F-box protein 42
mm9_v1_chr11_+_97888269_97888292	0.0947756	FOX{D1,D2}.p2	BC089549|Rpl19|19921|ribosomal protein L19	AK010440|Rpl19|19921|ribosomal protein L19	AK075817|Rpl19|19921|ribosomal protein L19	BC087961|Rpl19|19921|ribosomal protein L19	BC092539|Rpl19|19921|ribosomal protein L19	BC083131|Rpl19|19921|ribosomal protein L19	BC010710|Rpl19|19921|ribosomal protein L19
mm9_v1_chr14_-_56704033_56704109	0.0945554	FOX{D1,D2}.p2	NM_008572|Mcpt8|17231|mast cell protease 8	X78545|Mcpt8|17231|mast cell protease 8	AK136485|Mcpt8|17231|mast cell protease 8	BC120607|Mcpt8|17231|mast cell protease 8	BC119342|Mcpt8|17231|mast cell protease 8	BC144934|Mcpt8|17231|mast cell protease 8
mm9_v1_chrX_+_30245481_30245481	0.0945205	FOX{D1,D2}.p2	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr3_-_30498769_30498835	0.0941005	FOX{D1,D2}.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr14_+_66759796_66759796	0.0938762	FOX{D1,D2}.p2	BC011490|Chrna2|110902|cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)	NM_144803|Chrna2|110902|cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
mm9_v1_chr4_-_142889372_142889476	0.0923864	FOX{D1,D2}.p2	NM_010329|Pdpn|14726|podoplanin	AK158855|Pdpn|14726|podoplanin
mm9_v1_chr1_-_178766242_178766293	0.0916226	FOX{D1,D2}.p2	BC064076|Hmga2-ps1|15365|high mobility group AT-hook 2, pseudogene 1	AK033703|Hmga2-ps1|15365|high mobility group AT-hook 2, pseudogene 1
mm9_v1_chr3_-_36470882_36470894	0.0913398	FOX{D1,D2}.p2	AK135861|Ccna2|12428|cyclin A2
mm9_v1_chr2_-_6805937_6806041	0.0863467	FOX{D1,D2}.p2	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr7_+_112005496_112005529	0.0858345	FOX{D1,D2}.p2	BC140988|Dub1|13531|deubiquitinating enzyme 1	U41636|Dub1|13531|deubiquitinating enzyme 1	NM_007887|Dub1|13531|deubiquitinating enzyme 1
mm9_v1_chr7_-_88489894_88490088	0.0854438	FOX{D1,D2}.p2	BC081466|Rps17|20068|ribosomal protein S17	D25213|Rps17|20068|ribosomal protein S17	AK158902|Rps17|20068|ribosomal protein S17
mm9_v1_chr5_+_25005506_25005758	0.0847412	FOX{D1,D2}.p2	AK149324|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene	AK029244|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene
mm9_v1_chr1_+_24184448_24184693	0.0844405	FOX{D1,D2}.p2	NM_007740|Col9a1|12839|collagen, type IX, alpha 1	AK031071|Col9a1|12839|collagen, type IX, alpha 1	D17511|Col9a1|12839|collagen, type IX, alpha 1	BC046970|Col9a1|12839|collagen, type IX, alpha 1	L12215|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr9_-_40792541_40792554	0.0840542	FOX{D1,D2}.p2	AK163744|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr19_+_5041341_5041422	0.0839712	FOX{D1,D2}.p2	AF233580|Brms1|107392|breast cancer metastasis-suppressor 1	AK076729|Brms1|107392|breast cancer metastasis-suppressor 1	BC016108|Brms1|107392|breast cancer metastasis-suppressor 1	NM_134155|Brms1|107392|breast cancer metastasis-suppressor 1	BC003485|Brms1|107392|breast cancer metastasis-suppressor 1
mm9_v1_chrX_+_8849905_8850039	0.0834609	FOX{D1,D2}.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr13_+_49600158_49600323	0.0828473	FOX{D1,D2}.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr12_-_101397818_101397862	0.082824	FOX{D1,D2}.p2	AK036688|BC002230|217827|cDNA sequence BC002230	AK032800|BC002230|217827|cDNA sequence BC002230	NM_183155|BC002230|217827|cDNA sequence BC002230
mm9_v1_chr9_-_54407862_54407915	0.0827417	FOX{D1,D2}.p2	AB016080|Cib2|56506|calcium and integrin binding family member 2	NM_019686|Cib2|56506|calcium and integrin binding family member 2	BC005739|Cib2|56506|calcium and integrin binding family member 2
mm9_v1_chr4_+_8534378_8534506	0.0821297	FOX{D1,D2}.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr11_-_113571330_113571330	0.0818279	FOX{D1,D2}.p2	AK005072|Cpsf4l|52670|cleavage and polyadenylation specific factor 4-like	NM_029794|Cpsf4l|52670|cleavage and polyadenylation specific factor 4-like
mm9_v1_chr14_-_51544484_51544489	0.0816736	FOX{D1,D2}.p2	BC091757|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr5_+_104888468_104888623	0.0814577	FOX{D1,D2}.p2	BC053058|Pkd2|18764|polycystic kidney disease 2	BC062969|Pkd2|18764|polycystic kidney disease 2	NM_008861|Pkd2|18764|polycystic kidney disease 2	FJ609779|Pkd2|18764|polycystic kidney disease 2	Y13278|Pkd2|18764|polycystic kidney disease 2	AK053502|Pkd2|18764|polycystic kidney disease 2	AF014010|Pkd2|18764|polycystic kidney disease 2	AK164673|Pkd2|18764|polycystic kidney disease 2	AK128961|Pkd2|18764|polycystic kidney disease 2
mm9_v1_chr9_+_7628229_7628230	0.0805433	FOX{D1,D2}.p2	BC152335|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	BC152336|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	AF155933|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	NM_013903|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)
mm9_v1_chr14_+_56472872_56473037	0.0804951	FOX{D1,D2}.p2	BC151043|Nynrin|277154|NYN domain and retroviral integrase containing	NM_001040072|Nynrin|277154|NYN domain and retroviral integrase containing
mm9_v1_chr2_+_120967876_120967876	0.0801187	FOX{D1,D2}.p2	BC050879|Adal|75894|adenosine deaminase-like	BC052048|Adal|75894|adenosine deaminase-like	NM_029475|Adal|75894|adenosine deaminase-like
mm9_v1_chr11_-_70460333_70460538	0.0794074	FOX{D1,D2}.p2	AK186207|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK009824|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK168951|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK009487|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	BC019631|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	NM_024211|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	BC003455|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm9_v1_chr16_-_88869611_88869654	0.0789761	FOX{D1,D2}.p2	AF345292|Krtap16-2|170652|keratin associated protein 16-2	AF345299|Krtap16-9|170657|keratin associated protein 16-9	NM_130876|Krtap16-9|170657|keratin associated protein 16-9
mm9_v1_chr9_-_107981626_107981629	0.0777814	FOX{D1,D2}.p2	AK172244|Rnf123|84585|ring finger protein 123
mm9_v1_chrX_+_17722982_17722995	0.0773993	FOX{D1,D2}.p2	AK007061|Dusp21|73547|dual specificity phosphatase 21	BC048605|Dusp21|73547|dual specificity phosphatase 21	NM_028568|Dusp21|73547|dual specificity phosphatase 21
mm9_v1_chrX_+_159216296_159216363	0.0771766	FOX{D1,D2}.p2	AK181761|Rbbp7|245688|retinoblastoma binding protein 7	AK206140|Rbbp7|245688|retinoblastoma binding protein 7	AK213569|Rbbp7|245688|retinoblastoma binding protein 7	AK207469|Rbbp7|245688|retinoblastoma binding protein 7	AK208251|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chrX_-_70680646_70680684	0.0760082	FOX{D1,D2}.p2	BC104384|Trex2|24102|three prime repair exonuclease 2	BC104385|Trex2|24102|three prime repair exonuclease 2	AF151108|Trex2|24102|three prime repair exonuclease 2	NM_011907|Trex2|24102|three prime repair exonuclease 2
mm9_v1_chr10_-_33671000_33671074	0.075998	FOX{D1,D2}.p2	AK052071|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK160928|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK046191|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164710|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	NM_028287|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK012263|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	BC089514|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077730|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164346|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077304|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK172184|Zufsp|72580|zinc finger with UFM1-specific peptidase domain
mm9_v1_chr7_-_63217776_63217862	0.0752409	FOX{D1,D2}.p2	BC038499|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AB041581|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK076184|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK011248|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK028734|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK076051|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK154755|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	NM_023647|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK031255|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK008106|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	AK041427|Nipa2|93790|non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
mm9_v1_chr1_+_7162595_7162622	0.0733207	FOX{D1,D2}.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr8_-_72426456_72426456	0.0725634	FOX{D1,D2}.p2	BC034899|Ndufa13|67184|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	NM_023312|Ndufa13|67184|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
mm9_v1_chr2_+_163470487_163470585	0.0710227	FOX{D1,D2}.p2	AK002842|0610039K10Rik|68386|RIKEN cDNA 0610039K10 gene
mm9_v1_chr6_-_114987860_114987905	0.0709614	FOX{D1,D2}.p2	AK160774|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	NM_026894|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	AK005100|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene
mm9_v1_chr2_-_11524766_11524903	0.0697711	FOX{D1,D2}.p2	AK012296|Rbm17|76938|RNA binding motif protein 17	BC034896|Rbm17|76938|RNA binding motif protein 17	NM_152824|Rbm17|76938|RNA binding motif protein 17
mm9_v1_chr1_+_89470601_89470620	0.0690264	FOX{D1,D2}.p2	AK145284|Neu2|23956|neuraminidase 2	NM_001160163|Neu2|23956|neuraminidase 2	NM_001160164|Neu2|23956|neuraminidase 2	FJ613504|Neu2|23956|neuraminidase 2
mm9_v1_chrX_+_51028002_51028007	0.0666314	FOX{D1,D2}.p2	AK015678|4930502E18Rik|75013|RIKEN cDNA 4930502E18 gene	BC115663|4930502E18Rik|75013|RIKEN cDNA 4930502E18 gene	BC115664|4930502E18Rik|75013|RIKEN cDNA 4930502E18 gene	NM_029142|4930502E18Rik|75013|RIKEN cDNA 4930502E18 gene
mm9_v1_chr6_+_78355148_78355151	0.0656968	FOX{D1,D2}.p2	NM_009043|Reg2|19693|regenerating islet-derived 2	AK008196|Reg2|19693|regenerating islet-derived 2
mm9_v1_chrX_+_30977792_30977837	0.0651158	FOX{D1,D2}.p2	NM_001168337|Gm2825|100040533|predicted gene 2825	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chrX_-_31350951_31350996	0.0650722	FOX{D1,D2}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001099333|Gm2863|100040606|predicted gene 2863
mm9_v1_chr2_-_87332571_87332574	0.0629839	FOX{D1,D2}.p2	BC052825|Pramel7|347712|preferentially expressed antigen in melanoma like 7	AF490343|Pramel7|347712|preferentially expressed antigen in melanoma like 7	NM_178250|Pramel7|347712|preferentially expressed antigen in melanoma like 7
mm9_v1_chr11_-_3271367_3271408	0.0628409	FOX{D1,D2}.p2	AB005132|Limk2|16886|LIM motif-containing protein kinase 2	NM_173053|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr6_+_134961629_134961652	0.0609897	FOX{D1,D2}.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr9_-_43951401_43951528	0.059869	FOX{D1,D2}.p2	
mm9_v1_chr1_+_172238933_172238992	0.0582339	FOX{D1,D2}.p2	AK005990|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC099563|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	NM_001039593|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132313|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132315|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene
mm9_v1_chr16_-_91044623_91044646	0.0578915	FOX{D1,D2}.p2	NM_026110|Gcfc1|67367|GC-rich sequence DNA-binding factor 1
mm9_v1_chr18_+_25224729_25224737	0.0569039	FOX{D1,D2}.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr5_+_124423632_124423689	0.0566698	FOX{D1,D2}.p2	NM_145070|Hip1r|29816|huntingtin interacting protein 1 related	BC065101|Hip1r|29816|huntingtin interacting protein 1 related	AK014542|Hip1r|29816|huntingtin interacting protein 1 related	AK129182|Hip1r|29816|huntingtin interacting protein 1 related
mm9_v1_chr6_-_30643681_30643723	0.0564821	FOX{D1,D2}.p2	BC031892|Tsga14|83922|testis specific gene A14	NM_031998|Tsga14|83922|testis specific gene A14	AK161461|Tsga14|83922|testis specific gene A14	AK166974|Tsga14|83922|testis specific gene A14	AK019270|Tsga14|83922|testis specific gene A14	AK132495|Tsga14|83922|testis specific gene A14	AJ278891|Tsga14|83922|testis specific gene A14	AK006059|Tsga14|83922|testis specific gene A14	AK170213|Tsga14|83922|testis specific gene A14
mm9_v1_chr15_+_82000246_82000509	0.0562458	FOX{D1,D2}.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr11_+_87551028_87551046	0.055881	FOX{D1,D2}.p2	BC141092|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)
mm9_v1_chr10_+_126857922_126857922	0.0544449	FOX{D1,D2}.p2	AK043545|R3hdm2|71750|R3H domain containing 2	NM_001168293|R3hdm2|71750|R3H domain containing 2	NM_027900|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr6_+_30026320_30026320	0.0514674	FOX{D1,D2}.p2	AK135673|Nrf1|18181|nuclear respiratory factor 1	NM_001164229|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr14_+_118536326_118536519	0.0513122	FOX{D1,D2}.p2	NM_021434|Gpr180|58245|G protein-coupled receptor 180	AK169908|Gpr180|58245|G protein-coupled receptor 180	AB041545|Gpr180|58245|G protein-coupled receptor 180	AK170316|Gpr180|58245|G protein-coupled receptor 180	BC055726|Gpr180|58245|G protein-coupled receptor 180	AK053422|Gpr180|58245|G protein-coupled receptor 180	BC069981|Gpr180|58245|G protein-coupled receptor 180	AK212055|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chr9_-_107981630_107981631	0.0481993	FOX{D1,D2}.p2	BC057082|Rnf123|84585|ring finger protein 123
mm9_v1_chr4_+_154929136_154929270	0.0479777	FOX{D1,D2}.p2	AK218112|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK190349|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK191980|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK199789|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK200062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr1_-_132783915_132783987	0.0463609	FOX{D1,D2}.p2	AF333251|Il24|93672|interleukin 24	DQ401033|Il24|93672|interleukin 24	NM_053095|Il24|93672|interleukin 24
mm9_v1_chr10_+_127142225_127142311	0.0463322	FOX{D1,D2}.p2	BC147605|Myo1a|432516|myosin IA	BC147612|Myo1a|432516|myosin IA	AF009960|Myo1a|432516|myosin IA	NM_001081219|Myo1a|432516|myosin IA
mm9_v1_chr13_-_113971103_113971104	0.0460087	FOX{D1,D2}.p2	BC117981|Gzmk|14945|granzyme K	NM_008196|Gzmk|14945|granzyme K
mm9_v1_chrX_-_3667391_3667436	0.0456545	FOX{D1,D2}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chrX_+_53708015_53708070	0.0455635	FOX{D1,D2}.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr15_-_81191176_81191243	0.0448921	FOX{D1,D2}.p2	BC011292|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AK003672|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AJ006341|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AK002388|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	NM_011399|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	BC008571|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
mm9_v1_chr11_+_19824835_19824933	0.0440699	FOX{D1,D2}.p2	AB063496|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr17_-_47969979_47970125	0.0437674	FOX{D1,D2}.p2	U57820|Mdfi|17240|MyoD family inhibitor
mm9_v1_chr5_+_91456489_91456542	0.0435995	FOX{D1,D2}.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr9_-_58589362_58589365	0.0435994	FOX{D1,D2}.p2	AK010725|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	BC038688|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	NM_028598|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene
mm9_v1_chr9_+_108462759_108462899	0.0433975	FOX{D1,D2}.p2	AK169129|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK169788|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK146362|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151706|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK166667|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M33934|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK002676|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK011777|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK143505|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK150713|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151233|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK152691|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK160569|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK159822|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC052671|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC010314|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	NM_011830|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M98333|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2
mm9_v1_chr10_+_84085091_84085181	0.0419363	FOX{D1,D2}.p2	AK039366|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	AK039244|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	BC068143|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	NM_027423|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B
mm9_v1_chr1_-_162964371_162964389	0.0417612	FOX{D1,D2}.p2	BC113763|Zbtb37|240869|zinc finger and BTB domain containing 37	AK084871|Zbtb37|240869|zinc finger and BTB domain containing 37	NM_173424|Zbtb37|240869|zinc finger and BTB domain containing 37
mm9_v1_chrX_+_30732633_30732678	0.040541	FOX{D1,D2}.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	NM_027955|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr17_-_15080040_15080162	0.040452	FOX{D1,D2}.p2	AK004434|1190001L17Rik|68923|RIKEN cDNA 1190001L17 gene	AK077050|Wdr27|71682|WD repeat domain 27	NM_175173|Wdr27|71682|WD repeat domain 27	AK084217|Wdr27|71682|WD repeat domain 27	AK002615|Wdr27|71682|WD repeat domain 27
mm9_v1_chr3_-_151856766_151856837	0.0400743	FOX{D1,D2}.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr6_-_116578970_116579010	0.0384865	FOX{D1,D2}.p2	AK152681|Zfp422|67255|zinc finger protein 422	AK082970|Zfp422|67255|zinc finger protein 422	NM_026057|Zfp422|67255|zinc finger protein 422
mm9_v1_chr11_+_94189524_94189598	0.0383668	FOX{D1,D2}.p2	AK017451|Ankrd40|71452|ankyrin repeat domain 40	L10902|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chr8_-_87366624_87366670	0.0373835	FOX{D1,D2}.p2	X56603|Calr|12317|calreticulin
mm9_v1_chr9_-_78435778_78435821	0.0372646	FOX{D1,D2}.p2	AK169868|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	BC058785|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr1_+_58561979_58562000	0.0370493	FOX{D1,D2}.p2	AK138448|Gm15834|100306960|predicted gene 15834	AK144771|Gm15834|100306960|predicted gene 15834	AK053027|Gm15834|100306960|predicted gene 15834
mm9_v1_chrX_+_30598310_30598355	0.0355191	FOX{D1,D2}.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chrX_+_135751704_135751704	0.0351737	FOX{D1,D2}.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr13_-_21875234_21875270	0.0336767	FOX{D1,D2}.p2	BC107287|Hist1h3i|319153|histone cluster 1, H3i	BC127148|Hist1h3i|319153|histone cluster 1, H3i	BC116383|Hist1h3i|319153|histone cluster 1, H3i	AK155722|Hist1h3i|319153|histone cluster 1, H3i	NM_178207|Hist1h3i|319153|histone cluster 1, H3i
mm9_v1_chr6_-_123483423_123483423	0.0331219	FOX{D1,D2}.p2	NM_001104635|Vmn2r21|546912|vomeronasal 2, receptor 21
mm9_v1_chr7_-_30857837_30857841	0.0326954	FOX{D1,D2}.p2	AK037211|Zfp82|330502|zinc finger protein 82	NM_177889|Zfp82|330502|zinc finger protein 82
mm9_v1_chr15_+_78859949_78859971	0.0308441	FOX{D1,D2}.p2	
mm9_v1_chr2_+_34262301_34262360	0.0307525	FOX{D1,D2}.p2	AK132263|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr17_+_29089623_29089648	0.0303924	FOX{D1,D2}.p2	AK088807|Kctd20|66989|potassium channel tetramerisation domain containing 20	AK045670|Kctd20|66989|potassium channel tetramerisation domain containing 20
mm9_v1_chr8_-_72411261_72411294	0.0285571	FOX{D1,D2}.p2	BC006187|Cilp2|68709|cartilage intermediate layer protein 2	NM_026818|Cilp2|68709|cartilage intermediate layer protein 2
mm9_v1_chr13_-_12742377_12742693	0.0274605	FOX{D1,D2}.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK170650|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	BC093499|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AF154337|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK009736|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK170103|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK087190|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK171335|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK010724|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene
mm9_v1_chr13_+_109444370_109444370	0.0268881	FOX{D1,D2}.p2	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr11_-_3271326_3271358	0.0256326	FOX{D1,D2}.p2	BC086629|Limk2|16886|LIM motif-containing protein kinase 2	AK146099|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr19_-_47911850_47911871	0.0253599	FOX{D1,D2}.p2	AK015497|Wdr96|70806|WD repeat domain 96	NM_027559|Wdr96|70806|WD repeat domain 96	AK015217|Wdr96|70806|WD repeat domain 96
mm9_v1_chrX_+_3907010_3907055	0.024017	FOX{D1,D2}.p2	NM_001085543|Gm14347|627264|predicted gene 14347	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr4_-_140366562_140366564	0.0238741	FOX{D1,D2}.p2	AB013849|Padi3|18601|peptidyl arginine deiminase, type III	NM_011060|Padi3|18601|peptidyl arginine deiminase, type III
mm9_v1_chr3_+_30501008_30501008	0.0225823	FOX{D1,D2}.p2	BC065084|Mynn|80732|myoneurin	NM_030557|Mynn|80732|myoneurin
mm9_v1_chr8_+_73895369_73895482	0.0218999	FOX{D1,D2}.p2	AK020528|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr5_+_53174293_53174344	0.0209281	FOX{D1,D2}.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr6_-_87300891_87300908	0.0207018	FOX{D1,D2}.p2	BC099446|Gkn1|66283|gastrokine 1	BC132540|Gkn1|66283|gastrokine 1	BC132542|Gkn1|66283|gastrokine 1	AK008640|Gkn1|66283|gastrokine 1	AK008647|Gkn1|66283|gastrokine 1	AK008722|Gkn1|66283|gastrokine 1	AK008956|Gkn1|66283|gastrokine 1	AK009145|Gkn1|66283|gastrokine 1	AK028136|Gkn1|66283|gastrokine 1	AK008622|Gkn1|66283|gastrokine 1	AK008641|Gkn1|66283|gastrokine 1	AK008745|Gkn1|66283|gastrokine 1	AK008933|Gkn1|66283|gastrokine 1	AK008990|Gkn1|66283|gastrokine 1	AK019050|Gkn1|66283|gastrokine 1	AY456960|Gkn1|66283|gastrokine 1	NM_025466|Gkn1|66283|gastrokine 1
mm9_v1_chr17_+_37079995_37080032	0.0192394	FOX{D1,D2}.p2	BC132405|Rnf39|386454|ring finger protein 39	BC145677|Rnf39|386454|ring finger protein 39	NM_001099632|Rnf39|386454|ring finger protein 39
mm9_v1_chr14_-_14793678_14793804	0.0189323	FOX{D1,D2}.p2	AK147003|Thoc7|66231|THO complex 7 homolog (Drosophila)	AK007440|Thoc7|66231|THO complex 7 homolog (Drosophila)	AK008899|Thoc7|66231|THO complex 7 homolog (Drosophila)	NM_001013578|Thoc7|66231|THO complex 7 homolog (Drosophila)	NM_025435|Thoc7|66231|THO complex 7 homolog (Drosophila)	AK013319|Thoc7|66231|THO complex 7 homolog (Drosophila)	AK005176|Thoc7|66231|THO complex 7 homolog (Drosophila)	BC042209|Thoc7|66231|THO complex 7 homolog (Drosophila)	AK010958|Thoc7|66231|THO complex 7 homolog (Drosophila)	BC027113|Thoc7|66231|THO complex 7 homolog (Drosophila)	BC054419|Thoc7|66231|THO complex 7 homolog (Drosophila)	BC116919|Thoc7|66231|THO complex 7 homolog (Drosophila)	BC116945|Thoc7|66231|THO complex 7 homolog (Drosophila)
mm9_v1_chr6_+_123258350_123258350	0.0168101	FOX{D1,D2}.p2	NM_001104632|Vmn2r19|232358|vomeronasal 2, receptor 19
mm9_v1_chr1_+_190086716_190086716	0.0163754	FOX{D1,D2}.p2	NM_021408|Ush2a|22283|Usher syndrome 2A (autosomal recessive, mild) homolog (human)
mm9_v1_chr3_+_90058166_90058262	0.0149847	FOX{D1,D2}.p2	NM_028881|Crtc2|74343|CREB regulated transcription coactivator 2	BC032183|Crtc2|74343|CREB regulated transcription coactivator 2	AK169944|Crtc2|74343|CREB regulated transcription coactivator 2	BC033300|Crtc2|74343|CREB regulated transcription coactivator 2	BC023831|Crtc2|74343|CREB regulated transcription coactivator 2	AK156192|Crtc2|74343|CREB regulated transcription coactivator 2	AK079382|Crtc2|74343|CREB regulated transcription coactivator 2	AK172084|Crtc2|74343|CREB regulated transcription coactivator 2	BC023091|Crtc2|74343|CREB regulated transcription coactivator 2
mm9_v1_chr13_-_21872421_21872495	0.0129352	FOX{D1,D2}.p2	BC114579|Hist1h1b|56702|histone cluster 1, H1b	NM_020034|Hist1h1b|56702|histone cluster 1, H1b	AK020117|Hist1h1b|56702|histone cluster 1, H1b
mm9_v1_chrX_-_31752420_31752465	0.0118102	FOX{D1,D2}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	NM_001145038|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr3_-_144637974_144638008	0.0113044	FOX{D1,D2}.p2	AY560902|Clca6|99663|chloride channel calcium activated 6	AY560903|Clca6|99663|chloride channel calcium activated 6	AK033591|Clca6|99663|chloride channel calcium activated 6	NM_207208|Clca6|99663|chloride channel calcium activated 6
mm9_v1_chr7_+_52939783_52939798	0.00777831	FOX{D1,D2}.p2	NM_001033356|Ntn5|243967|netrin 5	AK142898|Ntn5|243967|netrin 5	BC150901|Ntn5|243967|netrin 5	BC172055|Ntn5|243967|netrin 5
mm9_v1_chr16_-_32797484_32797520	0.0064897	FOX{D1,D2}.p2	AK085640|Muc20|224116|mucin 20	AK165477|Muc20|224116|mucin 20	AK142548|Muc20|224116|mucin 20	NM_001145874|Muc20|224116|mucin 20	NM_146071|Muc20|224116|mucin 20
mm9_v1_chr2_+_30199519_30199667	0.00575766	FOX{D1,D2}.p2	AK198439|Nup188|227699|nucleoporin 188
mm9_v1_chr13_-_65214222_65214309	0.00362444	FOX{D1,D2}.p2	BC033469|Hiatl1|66631|hippocampus abundant transcript-like 1	AK090174|Hiatl1|66631|hippocampus abundant transcript-like 1	AK146596|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_001083901|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_133680|Hiatl1|66631|hippocampus abundant transcript-like 1
mm9_v1_chr7_-_148136109_148136189	0.00334054	FOX{D1,D2}.p2	EU380257|Ifitm5|73835|interferon induced transmembrane protein 5	AJ009781|Ifitm5|73835|interferon induced transmembrane protein 5	BC103790|Ifitm5|73835|interferon induced transmembrane protein 5	NM_053088|Ifitm5|73835|interferon induced transmembrane protein 5	AK003363|Ifitm5|73835|interferon induced transmembrane protein 5	FJ200451|Ifitm5|73835|interferon induced transmembrane protein 5
mm9_v1_chr6_+_78375973_78375976	0.0024679	FOX{D1,D2}.p2	AK133506|Reg1|19692|regenerating islet-derived 1	AK160452|Reg1|19692|regenerating islet-derived 1	NM_009042|Reg1|19692|regenerating islet-derived 1
mm9_v1_chr12_+_72237834_72237834	0.00213881	FOX{D1,D2}.p2	BC043104|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene	NM_001163378|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene	NM_029818|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene
mm9_v1_chr17_+_66460934_66461036	0.00132236	FOX{D1,D2}.p2	AK159820|ORF19|68767|open reading frame 19	AK171737|ORF19|68767|open reading frame 19	AK172673|ORF19|68767|open reading frame 19	AJ304796|ORF19|68767|open reading frame 19	AK149967|ORF19|68767|open reading frame 19	BC025839|ORF19|68767|open reading frame 19	NM_001037757|ORF19|68767|open reading frame 19	AK154400|ORF19|68767|open reading frame 19	AK033616|ORF19|68767|open reading frame 19
